EY756200
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756200 vs. ExPASy Swiss-Prot
Match: RS6_BOVIN (40S ribosomal protein S6 OS=Bos taurus GN=RPS6 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.543e-22 Identity = 59/113 (52.21%), Postives = 68/113 (60.18%), Query Frame = 3 Query: 12 PGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKR 350 PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ K +KAPKIQRLVTP L EY KLLA R+KE +E+R E +AK+R Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKDGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR 232
BLAST of EY756200 vs. ExPASy Swiss-Prot
Match: RS6_CHICK (40S ribosomal protein S6 OS=Gallus gallus GN=RPS6 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.239e-22 Identity = 58/113 (51.33%), Postives = 69/113 (61.06%), Query Frame = 3 Query: 12 PGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKR 350 PGLTDT PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRLVTP L +Y KLLA R+KE +E+R E +AK+R Sbjct: 122 PGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEEAADYAKLLAKRMKEAKEKRQEQIAKRR 232
BLAST of EY756200 vs. ExPASy Swiss-Prot
Match: RS6_APLCA (40S ribosomal protein S6 OS=Aplysia californica GN=RPS6 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.106e-21 Identity = 63/115 (54.78%), Postives = 70/115 (60.87%), Query Frame = 3 Query: 12 PGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKV-SKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRS 353 PGLTD PR GPKRASKIRKLFNLSKEDDVR+YV RR + GKK SKAPKIQRLVTP+ L EY KLLA R+KE +ER+ E +KRS Sbjct: 122 PGLTDKTIPRRLGPKRASKIRKLFNLSKEDDVRQYV--VRRPLPERDGKKAKSKAPKIQRLVTPVVLQRKRARMALKKKRVTKKREDHAEYTKLLAQRMKEAKERKME---RKRS 231
BLAST of EY756200 vs. ExPASy Swiss-Prot
Match: RS6_XENLA (40S ribosomal protein S6 OS=Xenopus laevis GN=rps6 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.593e-21 Identity = 58/113 (51.33%), Postives = 67/113 (59.29%), Query Frame = 3 Query: 12 PGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKR 350 PGLTD PR GPKRAS+IRKLFNLSKEDDVR+YV R+ + K +KAPKIQRLVTP L EY KLLA R KE +E+R E +AK+R Sbjct: 122 PGLTDNTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLAKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKRSKEAKEKRQEQIAKRR 232
BLAST of EY756200 vs. ExPASy Swiss-Prot
Match: RS6_SPOFR (40S ribosomal protein S6 OS=Spodoptera frugiperda GN=RpS6 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.004e-21 Identity = 60/118 (50.85%), Postives = 69/118 (58.47%), Query Frame = 3 Query: 12 PGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVS----KAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRS 353 PGLTD PR GPKRASKIRKLFNLSKEDDVR+YV +R K GK+ + KAPKIQRLVTP+ L +Y KLLA R KE + RR E L ++RS Sbjct: 122 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKRLLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRLAKRKQSENDYAKLLAQRKKESKVRRQEELKRRRS 237
BLAST of EY756200 vs. ExPASy Swiss-Prot
Match: RS6_MANSE (40S ribosomal protein S6 OS=Manduca sexta GN=RpS6 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.775e-20 Identity = 58/118 (49.15%), Postives = 68/118 (57.63%), Query Frame = 3 Query: 12 PGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVS----KAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRS 353 PGLTD PR GPKRASKIRKLFNLSKEDDVR+YV + K GK+ + KAPKIQRLVTP+ L +Y KLLA R KE + RR E + ++RS Sbjct: 122 PGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKALLPAKEGKENAKPRYKAPKIQRLVTPVVLQRRRHRLALKKKRLAKRKSAEADYAKLLAQRKKESKVRRQEEIKRRRS 237
BLAST of EY756200 vs. ExPASy Swiss-Prot
Match: RS6_GLOMM (40S ribosomal protein S6 OS=Glossina morsitans morsitans GN=RpS6 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.849e-20 Identity = 59/114 (51.75%), Postives = 67/114 (58.77%), Query Frame = 3 Query: 12 PGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKR 350 PGLTDT PR GPKRASKIRKL+NLSK DDVR YV RR K KK +SKAPKIQRL+TP+ L +Y KLLA R KE + +R E AK+R Sbjct: 122 PGLTDTSVPRRLGPKRASKIRKLYNLSKVDDVRPYV--IRRPLPAKDNKKAISKAPKIQRLITPVVLQRKRRRIALKKKRQAASKEAAADYAKLLAQRKKESKAKREE--AKRR 231
BLAST of EY756200 vs. ExPASy Swiss-Prot
Match: RS6_DROME (40S ribosomal protein S6 OS=Drosophila melanogaster GN=RpS6 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.971e-19 Identity = 58/114 (50.88%), Postives = 67/114 (58.77%), Query Frame = 3 Query: 12 PGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKR 350 PGLTDT PR GPKRASKIRKL+NLSKEDDVR++V RR K KK SKAPKIQRL+TP+ L +Y KLL R KE + +R E AK+R Sbjct: 122 PGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFV--VRRPLPAKDNKKATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE--AKRR 231
BLAST of EY756200 vs. ExPASy Swiss-Prot
Match: RS6_YARLI (40S ribosomal protein S6 OS=Yarrowia lipolytica GN=RPS6 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.180e-18 Identity = 54/115 (46.96%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 15 GLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 359 GLT PR GPKRA+ IRKLF LSKEDDVR+YV RR TTKSGK +KAPKIQRL+TP L EY +LLA R+ E++ ++E ++ S L Sbjct: 123 GLTTETVPRRLGPKRANNIRKLFALSKEDDVRQYV--IRREVTTKSGKTYTKAPKIQRLITPRRLAHKAQLREKKVKAIQASKDAAAEYAQLLAKRVAEKKSEKAEEKKRRASSL 235
BLAST of EY756200 vs. ExPASy Swiss-Prot
Match: RS6_AEDAE (40S ribosomal protein S6 OS=Aedes aegypti GN=RpS6 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 2.847e-18 Identity = 53/114 (46.49%), Postives = 66/114 (57.89%), Query Frame = 3 Query: 12 PGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKV-SKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKR 350 PGLTDT PR GPKRAS IRKL+NL+KEDDVR++V +R K GKK +KAPKIQRL+TP+ L EY K+L R +++R RR L+ R Sbjct: 122 PGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV--VKRPLPEKDGKKARTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQERIRRRSRLSSMR 233 The following BLAST results are available for this feature:
BLAST of EY756200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756200 ID=EY756200; Name=EY756200; organism=Citrus sinensis; type=EST; length=579bpback to top |