EY756186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4_PRUAR (40S ribosomal protein S4 OS=Prunus armeniaca GN=RPS4 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.730e-26 Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 2 Query: 275 VTMDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTSIAT 529 V M TG +I E H GS+ETIH+QD GHE AT LG+VFTI GT +S P+G I L+ +EE+ KRQ+ + AT Sbjct: 176 VVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTILEEAKKRQAAAQTAAT 260 HSP 2 Score: 63.929 bits (154), Expect = 6.730e-26 Identity = 37/82 (45.12%), Postives = 45/82 (54.88%), Query Frame = 3 Query: 12 PQINANSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 P+ N N LLYDT GR L S + +E+ FKLC VRSVQF ++ P T DGRTI Y +TN IT+ IK Sbjct: 89 PKTNENFRLLYDTKGRFRLHSIRDEESKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLETNKITDFIK 170
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS41_ARATH (40S ribosomal protein S4-1 OS=Arabidopsis thaliana GN=RPS4A PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.561e-24 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 2 Query: 275 VTMDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQS 508 V M TG +I E H GS+ETIHIQD+ GHE AT LG+V+TI GT +S P+G I L+ IEE+ KR S Sbjct: 180 VVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLS 257 HSP 2 Score: 61.2326 bits (147), Expect = 4.561e-24 Identity = 36/82 (43.90%), Postives = 42/82 (51.22%), Query Frame = 3 Query: 12 PQINANSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 P+ N N LLYDT GR L S K +EA FKLC VRS+QF ++ P T DGRTI Y + N I IK Sbjct: 93 PKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS43_ARATH (40S ribosomal protein S4-3 OS=Arabidopsis thaliana GN=RPS4D PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.936e-24 Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 275 VTMDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKR 502 V M TG +I E H GS+ETIHIQD+ GHE AT LG+V+TI GT +S P+G I L+ IEE+ KR Sbjct: 180 VVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKR 255 HSP 2 Score: 61.6178 bits (148), Expect = 5.936e-24 Identity = 36/82 (43.90%), Postives = 42/82 (51.22%), Query Frame = 3 Query: 12 PQINANSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 P+ N N LLYDT GR L S K +EA FKLC VRS+QF ++ P T DGRTI Y + N I IK Sbjct: 93 PKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS42_ARATH (40S ribosomal protein S4-2 OS=Arabidopsis thaliana GN=RPS4B PE=2 SV=4) HSP 1 Score: 70.8626 bits (172), Expect = 7.725e-24 Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 275 VTMDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKR 502 V M TG +I E H GS+ETIHIQD+ GHE AT LG+V+TI GT +S P+G I L+ IEE+ KR Sbjct: 180 VVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKR 255 HSP 2 Score: 61.2326 bits (147), Expect = 7.725e-24 Identity = 36/82 (43.90%), Postives = 42/82 (51.22%), Query Frame = 3 Query: 12 PQINANSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 P+ N N LLYDT GR L S K +EA FKLC VRS+QF ++ P T DGRTI Y + N I IK Sbjct: 93 PKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4_ORYSJ (40S ribosomal protein S4 OS=Oryza sativa subsp. japonica GN=RPS4 PE=2 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.308e-23 Identity = 38/84 (45.24%), Postives = 48/84 (57.14%), Query Frame = 2 Query: 275 VTMDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTSIA 526 V M TG +I E H GS+ETIH++D LGH+ AT LG+VFTI G +S P+G I LS IEE KR + + A Sbjct: 180 VVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAAAQAAA 263 HSP 2 Score: 60.8474 bits (146), Expect = 1.308e-23 Identity = 36/82 (43.90%), Postives = 43/82 (52.44%), Query Frame = 3 Query: 12 PQINANSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 P+ N LLYDT GR L S K ++A FKLC VRSVQF ++ P T DGRTI Y +TN I + IK Sbjct: 93 PKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4_MAIZE (40S ribosomal protein S4 OS=Zea mays GN=RPS4 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.882e-23 Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 2 Query: 275 VTMDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTSIA 526 V M TG +I E H GS+ETIH++D+LGH+ AT +G+VFTI G +S P+G I LS IEE KR + + A Sbjct: 180 VVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAAAQAAA 263 HSP 2 Score: 60.077 bits (144), Expect = 2.882e-23 Identity = 35/82 (42.68%), Postives = 43/82 (52.44%), Query Frame = 3 Query: 12 PQINANSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 P+ N N LLYDT GR L + ++A FKLC VRSVQF ++ P T DGRTI Y +TN I + IK Sbjct: 93 PKTNENYRLLYDTKGRFRLHPIRDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4_SOLTU (40S ribosomal protein S4 OS=Solanum tuberosum GN=RPS4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.750e-23 Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 2 Query: 275 VTMDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 V M TG +I E H GS+ET+HIQD+ GHE AT LG+VFT+ GT +S P+G I L+ IE++ KR + +++ Sbjct: 180 VVMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEDARKRLAAQSA 261 HSP 2 Score: 60.4622 bits (145), Expect = 3.750e-23 Identity = 35/82 (42.68%), Postives = 44/82 (53.66%), Query Frame = 3 Query: 12 PQINANSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 P+ N N LLYDT GR L S + +E+ FKLC VRSVQF ++ P T DGRTI Y ++N I + IK Sbjct: 93 PKTNENFRLLYDTKGRFRLHSLRDEESKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4_GOSHI (40S ribosomal protein S4 OS=Gossypium hirsutum GN=RPS4 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.786e-22 Identity = 38/76 (50.00%), Postives = 45/76 (59.21%), Query Frame = 2 Query: 275 VTMDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKR 502 V M TG +I E H GS+ETIH+QD GHE AT LG+VFTI GT +S P+ I LS IEE+ KR Sbjct: 180 VVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKRKGIKLSIIEEARKR 255 HSP 2 Score: 56.225 bits (134), Expect = 6.786e-22 Identity = 34/82 (41.46%), Postives = 42/82 (51.22%), Query Frame = 3 Query: 12 PQINANSLLLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 P+ N + LLYDT GR L + DE FKLC VRSVQF ++ P T DGRTI Y ++N I + IK Sbjct: 93 PKTNEDFRLLYDTKGRFCLHAITGDETKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4B_SCHPO (40S ribosomal protein S4-B OS=Schizosaccharomyces pombe GN=rps4b PE=1 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 7.993e-15 Identity = 33/78 (42.31%), Postives = 44/78 (56.41%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLK 514 M TG I+ E+HLGS+E IH++D L E AT L +VF I S IS P+G + LS EE +R++LK Sbjct: 182 MVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGEAGKSWISLPKGKGVKLSITEERDRRRALK 259 HSP 2 Score: 43.5134 bits (101), Expect = 7.993e-15 Identity = 26/74 (35.14%), Postives = 34/74 (45.95%), Query Frame = 3 Query: 36 LLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 L+YD GR + +EA +KLC V+ VQ + P T DGRTI Y +TN I + IK Sbjct: 101 LVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4C_SCHPO (40S ribosomal protein S4-C OS=Schizosaccharomyces pombe GN=rps4c PE=1 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.350e-14 Identity = 33/78 (42.31%), Postives = 44/78 (56.41%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLK 514 M TG I+ E+HLGS+E IH++D L E AT L +VF I S IS P+G + LS EE +R++LK Sbjct: 182 MVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRRRALK 259 HSP 2 Score: 43.5134 bits (101), Expect = 1.350e-14 Identity = 26/74 (35.14%), Postives = 34/74 (45.95%), Query Frame = 3 Query: 36 LLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 L+YD GR + +EA +KLC V+ VQ + P T DGRTI Y +TN I + IK Sbjct: 101 LVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIK 174 The following BLAST results are available for this feature:
BLAST of EY756186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756186 ID=EY756186; Name=EY756186; organism=Citrus sinensis; type=EST; length=825bpback to top |