EY756186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4Y1_MONDO (40S ribosomal protein S4, Y isoform 1 OS=Monodelphis domestica GN=RPS4Y1 PE=2 SV=3) HSP 1 Score: 51.2174 bits (121), Expect = 1.211e-11 Identity = 29/80 (36.25%), Postives = 40/80 (50.00%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 M TG +I E H GS++ +H++D G+ AT L ++F I G IS P G I L+ EE KR + K S Sbjct: 182 MVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 261 HSP 2 Score: 39.6614 bits (91), Expect = 1.211e-11 Identity = 25/74 (33.78%), Postives = 33/74 (44.59%), Query Frame = 3 Query: 36 LLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 L+YDT GR + +EA +KLC VR + + P T D RTI Y +T IT+ IK Sbjct: 101 LVYDTKGRFAVHRITAEEAKYKLCKVRKIFVATKGIPHLVTHDARTIRYPDPLIKVNDTVQINLETGKITDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4_XENTR (40S ribosomal protein S4 OS=Xenopus tropicalis GN=rps4 PE=2 SV=3) HSP 1 Score: 51.2174 bits (121), Expect = 1.572e-11 Identity = 29/80 (36.25%), Postives = 40/80 (50.00%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 M TG +I E H GS++ +H++D G+ AT L ++F I G IS P G I L+ EE KR + K S Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 261 HSP 2 Score: 39.2762 bits (90), Expect = 1.572e-11 Identity = 25/74 (33.78%), Postives = 32/74 (43.24%), Query Frame = 3 Query: 36 LLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 L+YDT GR + +EA +KLC VR + P T D RTI Y +T IT+ IK Sbjct: 101 LVYDTKGRFAVHRITAEEAKYKLCKVRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4_XENLA (40S ribosomal protein S4 OS=Xenopus laevis GN=rps4 PE=2 SV=4) HSP 1 Score: 51.2174 bits (121), Expect = 1.572e-11 Identity = 29/80 (36.25%), Postives = 40/80 (50.00%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 M TG +I E H GS++ +H++D G+ AT L ++F I G IS P G I L+ EE KR + K S Sbjct: 182 MVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQS 261 HSP 2 Score: 39.2762 bits (90), Expect = 1.572e-11 Identity = 25/74 (33.78%), Postives = 32/74 (43.24%), Query Frame = 3 Query: 36 LLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 L+YDT GR + +EA +KLC VR + P T D RTI Y +T IT+ IK Sbjct: 101 LVYDTKGRFAVHRITSEEAKYKLCKVRKTWVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4X_MONDO (40S ribosomal protein S4, X isoform OS=Monodelphis domestica GN=RPS4X PE=2 SV=3) HSP 1 Score: 50.0618 bits (118), Expect = 3.440e-11 Identity = 28/78 (35.90%), Postives = 39/78 (50.00%), Query Frame = 2 Query: 281 MDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLK 514 M TG +I E H GS++ +H++D G+ AT L ++F I G IS P G I L+ EE KR + K Sbjct: 182 MVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAK 259 HSP 2 Score: 39.2762 bits (90), Expect = 3.440e-11 Identity = 25/74 (33.78%), Postives = 32/74 (43.24%), Query Frame = 3 Query: 36 LLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 L+YDT GR + +EA +KLC VR + P T D RTI Y +T IT+ IK Sbjct: 101 LVYDTKGRFAVHRITAEEAKYKLCKVRKTFVGTKAIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFIK 174
BLAST of EY756186 vs. ExPASy Swiss-Prot
Match: RS4Y1_PONPY (40S ribosomal protein S4, Y isoform 1 OS=Pongo pygmaeus GN=RPS4Y1 PE=3 SV=2) HSP 1 Score: 48.9062 bits (115), Expect = 7.525e-11 Identity = 28/82 (34.15%), Postives = 40/82 (48.78%), Query Frame = 2 Query: 275 VTMDTGXXXXXXXXIIMISEYHLGSYETIHIQDTLGHELATLLGHVFTIRMGTNS*ISPPEGIAITLSFIEESLKRQSLKTS 520 V M G +I E H GS++ +H++D G+ AT + ++F I G IS P G I L+ EE KR + K S Sbjct: 180 VCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKRLATKQS 261 HSP 2 Score: 39.2762 bits (90), Expect = 7.525e-11 Identity = 25/74 (33.78%), Postives = 31/74 (41.89%), Query Frame = 3 Query: 36 LLYDTNGRIHLTSFKYDEAIFKLCDVRSVQFWEERNPLPCTDDGRTILYAYXXXXXXXXXXXXXQTNLITNLIK 257 L+YDT GR + +EA +KLC VR + + P T D RTI Y T I N IK Sbjct: 101 LVYDTKGRFAVQRITVEEAKYKLCKVRKITVGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIK 174 The following BLAST results are available for this feature:
BLAST of EY756186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756186 ID=EY756186; Name=EY756186; organism=Citrus sinensis; type=EST; length=825bpback to top |