EY756169

Overview
NameEY756169
Unique NameEY756169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length439
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13310 contig Csv1_Contig13310:1..439. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_DROOR (Histone H4 OS=Drosophila orena GN=His4 PE=3 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 1.096e-26
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETRGVLK+FL+NVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_DROME (Histone H4 OS=Drosophila melanogaster GN=His4 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 1.096e-26
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETRGVLK+FL+NVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_DROMA (Histone H4 OS=Drosophila mauritiana GN=His4 PE=3 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 1.096e-26
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETRGVLK+FL+NVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_DROHY (Histone H4 OS=Drosophila hydei GN=His4 PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 1.096e-26
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETRGVLK+FL+NVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_DROER (Histone H4 OS=Drosophila erecta GN=His4 PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 1.096e-26
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETRGVLK+FL+NVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_DENKL (Histone H4 OS=Dendronephthya klunzingeri GN=H4DEKL PE=3 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 1.096e-26
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETRGVLK+FL+NVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_CHITH (Histone H4 OS=Chironomus thummi thummi GN=His4 PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 1.096e-26
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETRGVLK+FL+NVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_CHICK (Histone H4 OS=Gallus gallus GN=H4-I PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 1.096e-26
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETRGVLK+FL+NVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_CHAVR (Histone H4 OS=Chaetopterus variopedatus PE=3 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 1.096e-26
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETRGVLK+FL+NVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_CAIMO (Histone H4 OS=Cairina moschata PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 1.096e-26
Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETRGVLK+FL+NVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103
The following BLAST results are available for this feature:
BLAST of EY756169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_DROOR1.096e-2689.23Histone H4 OS=Drosophila orena GN=His4 PE=3 SV=3[more]
H4_DROME1.096e-2689.23Histone H4 OS=Drosophila melanogaster GN=His4 PE=1... [more]
H4_DROMA1.096e-2689.23Histone H4 OS=Drosophila mauritiana GN=His4 PE=3 S... [more]
H4_DROHY1.096e-2689.23Histone H4 OS=Drosophila hydei GN=His4 PE=3 SV=2[more]
H4_DROER1.096e-2689.23Histone H4 OS=Drosophila erecta GN=His4 PE=3 SV=2[more]
H4_DENKL1.096e-2689.23Histone H4 OS=Dendronephthya klunzingeri GN=H4DEKL... [more]
H4_CHITH1.096e-2689.23Histone H4 OS=Chironomus thummi thummi GN=His4 PE=... [more]
H4_CHICK1.096e-2689.23Histone H4 OS=Gallus gallus GN=H4-I PE=1 SV=2[more]
H4_CHAVR1.096e-2689.23Histone H4 OS=Chaetopterus variopedatus PE=3 SV=3[more]
H4_CAIMO1.096e-2689.23Histone H4 OS=Cairina moschata PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-D12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756169 ID=EY756169; Name=EY756169; organism=Citrus sinensis; type=EST; length=439bp
CCACGCGTCCGGAGGAGGCTTTACGAGAATCAGCGGTCTCATCTACGAGG
AGACACGCGGCGTCCTCAAGATCTTCTTGGACAACGTCATTCGCGATGCT
GTGACCTACACTGAGCACGCTCGCCGAAAGACGGTGACCGCCATGGATGT
CGTTTATGCGCTCAAGAGGCAGGGCAGGACTCTCTATGGGTTTGGTGGTT
GATGTGGCGTCGTTTTGTATTTTGTGTTTTAGGATTTTCCTTTTTTCCTG
TAAATCAGTGAATGTGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCA
ACTTGTATTTGCCGTTTCCTAGGGGTTTTTTTATTTTTTTGGTTCATTGG
TGTTTTCATCTTTGCAATGAGAATCTAGTTGTTTACTTCNNAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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