EY756169

Overview
NameEY756169
Unique NameEY756169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length439
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13310 contig Csv1_Contig13310:1..439. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_SOLST (Histone H4 OS=Solaster stimpsoni PE=3 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.212e-25
Identity = 56/65 (86.15%), Postives = 60/65 (92.31%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETRGVLK+FL+NVIRDAVTY EHA+RKTVT+MDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKTVTSMDVVYALKRQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_PHYPO (Histone H4 OS=Physarum polycephalum GN=H41 PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.700e-25
Identity = 57/65 (87.69%), Postives = 58/65 (89.23%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS  IYEETRGVLK FL+NVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISNTIYEETRGVLKTFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_MORAP (Histone H4 OS=Mortierella alpina GN=H4.1 PE=3 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 2.700e-25
Identity = 55/65 (84.62%), Postives = 60/65 (92.31%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETR VLK+FL+NVIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_CHLRE (Histone H4 OS=Chlamydomonas reinhardtii GN=H4-I PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.700e-25
Identity = 57/65 (87.69%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETR VLK FL+NVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRTVLKTFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_APIME (Histone H4 OS=Apis mellifera PE=3 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 2.700e-25
Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETRGVLK+FL+NVIRDAVTYTEH +RKTVTAMDVVYALK QGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHTKRKTVTAMDVVYALKIQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_VOLCA (Histone H4 OS=Volvox carteri GN=H4-I PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 4.605e-25
Identity = 57/65 (87.69%), Postives = 59/65 (90.77%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETR VLK FL+NVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRTVLKNFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_EIMTE (Histone H4 OS=Eimeria tenella PE=3 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 4.605e-25
Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEE RGVLK+FL+N+I+D+VTYTEHARRKTVTAMD+VY+LKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEEIRGVLKVFLENIIKDSVTYTEHARRKTVTAMDIVYSLKRQGRTLYGFGG 103          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_PHACH (Histone H4 OS=Phanerochaete chrysosporium GN=H4.1 PE=3 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 7.855e-25
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 196
            A  GG  RISGLIYEETRGVLKIFL+NVIRD+VTYTEHA+RKTVTA+DVVYALKR GRTLYGFG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHAKRKTVTALDVVYALKRSGRTLYGFG 102          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_AGABI (Histone H4 OS=Agaricus bisporus GN=hhfA PE=3 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 7.855e-25
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 196
            A  GG  RISGLIYEETRGVLKIFL+NVIRD+VTYTEHA+RKTVTA+DVVYALKR GRTLYGFG
Sbjct:   39 ARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHAKRKTVTALDVVYALKRSGRTLYGFG 102          
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_ASCSU (Histone H4 OS=Ascaris suum PE=3 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 1.026e-24
Identity = 55/65 (84.62%), Postives = 58/65 (89.23%), Query Frame = 2
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEETR VLK+FL+NVIRDAVTY EHA+RKTVTAMDVVYALK QGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKHQGRTLYGFGG 103          
The following BLAST results are available for this feature:
BLAST of EY756169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_SOLST1.212e-2586.15Histone H4 OS=Solaster stimpsoni PE=3 SV=2[more]
H4_PHYPO2.700e-2587.69Histone H4 OS=Physarum polycephalum GN=H41 PE=3 SV... [more]
H4_MORAP2.700e-2584.62Histone H4 OS=Mortierella alpina GN=H4.1 PE=3 SV=3[more]
H4_CHLRE2.700e-2587.69Histone H4 OS=Chlamydomonas reinhardtii GN=H4-I PE... [more]
H4_APIME2.700e-2586.15Histone H4 OS=Apis mellifera PE=3 SV=3[more]
H4_VOLCA4.605e-2587.69Histone H4 OS=Volvox carteri GN=H4-I PE=3 SV=2[more]
H4_EIMTE4.605e-2581.54Histone H4 OS=Eimeria tenella PE=3 SV=3[more]
H4_PHACH7.855e-2585.94Histone H4 OS=Phanerochaete chrysosporium GN=H4.1 ... [more]
H4_AGABI7.855e-2585.94Histone H4 OS=Agaricus bisporus GN=hhfA PE=3 SV=2[more]
H4_ASCSU1.026e-2484.62Histone H4 OS=Ascaris suum PE=3 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-D12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756169 ID=EY756169; Name=EY756169; organism=Citrus sinensis; type=EST; length=439bp
CCACGCGTCCGGAGGAGGCTTTACGAGAATCAGCGGTCTCATCTACGAGG
AGACACGCGGCGTCCTCAAGATCTTCTTGGACAACGTCATTCGCGATGCT
GTGACCTACACTGAGCACGCTCGCCGAAAGACGGTGACCGCCATGGATGT
CGTTTATGCGCTCAAGAGGCAGGGCAGGACTCTCTATGGGTTTGGTGGTT
GATGTGGCGTCGTTTTGTATTTTGTGTTTTAGGATTTTCCTTTTTTCCTG
TAAATCAGTGAATGTGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCA
ACTTGTATTTGCCGTTTCCTAGGGGTTTTTTTATTTTTTTGGTTCATTGG
TGTTTTCATCTTTGCAATGAGAATCTAGTTGTTTACTTCNNAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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