EY756169

Overview
NameEY756169
Unique NameEY756169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length439
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13310 contig Csv1_Contig13310:1..439. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_SCHPO (Histone H4 OS=Schizosaccharomyces pombe GN=hhf1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 8.685e-24
Identity = 51/65 (78.46%), Postives = 59/65 (90.77%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS L+YEETR VLK+FL+NVIRDAVTYTEHA+RKTVT++DVVY+LKRQGRT+YGFGG
Sbjct:   39 ARRGGVKRISALVYEETRAVLKLFLENVIRDAVTYTEHAKRKTVTSLDVVYSLKRQGRTIYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_STYLE (Histone H4 OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.134e-23
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS LIYEETR VL+ FL+NVIRD+VTYTEHA+RKTVTA+DVVYALKRQGRTLYGFGG
Sbjct:   40 ARRGGVKRISSLIYEETRNVLRSFLENVIRDSVTYTEHAKRKTVTALDVVYALKRQGRTLYGFGG 104
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_OXYNO (Histone H4 OS=Oxytricha nova PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.134e-23
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS LIYEETR VL+ FL+NVIRD+VTYTEHA+RKTVTA+DVVYALKRQGRTLYGFGG
Sbjct:   40 ARRGGVKRISSLIYEETRNVLRSFLENVIRDSVTYTEHAKRKTVTALDVVYALKRQGRTLYGFGG 104
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_CANGA (Histone H4 OS=Candida glabrata GN=HHF1 PE=3 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 1.481e-23
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEE R VLK FL++VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEEVRAVLKSFLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_ARXAD (Histone H4 OS=Arxula adeninivorans GN=ahsb4 PE=3 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 1.481e-23
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS LIYEETR VLK FL++VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISALIYEETRSVLKTFLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_YEAST (Histone H4 OS=Saccharomyces cerevisiae GN=HHF1 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 3.300e-23
Identity = 52/65 (80.00%), Postives = 58/65 (89.23%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYEE R VLK FL++VIRD+VTYTEHA+RKTVT++DVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H41_ASHGO (Histone H4.1 OS=Ashbya gossypii GN=HHF1 PE=3 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 3.300e-23
Identity = 52/65 (80.00%), Postives = 58/65 (89.23%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RISGLIYE+ R VLK FL++VIRDAVTYTEHA+RKTVT++DVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISGLIYEDVRAVLKSFLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H4_TETTH (Histone H4 OS=Tetrahymena thermophila GN=HHF1 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 4.310e-23
Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS  IY+++R VLK FL+NV+RDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H42_TETPY (Histone H4, minor OS=Tetrahymena pyriformis PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 4.310e-23
Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS  IY+++R VLK FL+NV+RDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of EY756169 vs. ExPASy Swiss-Prot
Match: H41_TETPY (Histone H4, major OS=Tetrahymena pyriformis PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 4.310e-23
Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 2 
Query:    5 ASGGGFTRISGLIYEETRGVLKIFLDNVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 199
            A  GG  RIS  IY+++R VLK FL+NV+RDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   39 ARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
The following BLAST results are available for this feature:
BLAST of EY756169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_SCHPO8.685e-2478.46Histone H4 OS=Schizosaccharomyces pombe GN=hhf1 PE... [more]
H4_STYLE1.134e-2381.54Histone H4 OS=Stylonychia lemnae PE=3 SV=2[more]
H4_OXYNO1.134e-2381.54Histone H4 OS=Oxytricha nova PE=3 SV=2[more]
H4_CANGA1.481e-2381.54Histone H4 OS=Candida glabrata GN=HHF1 PE=3 SV=3[more]
H4_ARXAD1.481e-2381.54Histone H4 OS=Arxula adeninivorans GN=ahsb4 PE=3 S... [more]
H4_YEAST3.300e-2380.00Histone H4 OS=Saccharomyces cerevisiae GN=HHF1 PE=... [more]
H41_ASHGO3.300e-2380.00Histone H4.1 OS=Ashbya gossypii GN=HHF1 PE=3 SV=3[more]
H4_TETTH4.310e-2380.00Histone H4 OS=Tetrahymena thermophila GN=HHF1 PE=1... [more]
H42_TETPY4.310e-2380.00Histone H4, minor OS=Tetrahymena pyriformis PE=1 S... [more]
H41_TETPY4.310e-2380.00Histone H4, major OS=Tetrahymena pyriformis PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-D12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756169 ID=EY756169; Name=EY756169; organism=Citrus sinensis; type=EST; length=439bp
CCACGCGTCCGGAGGAGGCTTTACGAGAATCAGCGGTCTCATCTACGAGG
AGACACGCGGCGTCCTCAAGATCTTCTTGGACAACGTCATTCGCGATGCT
GTGACCTACACTGAGCACGCTCGCCGAAAGACGGTGACCGCCATGGATGT
CGTTTATGCGCTCAAGAGGCAGGGCAGGACTCTCTATGGGTTTGGTGGTT
GATGTGGCGTCGTTTTGTATTTTGTGTTTTAGGATTTTCCTTTTTTCCTG
TAAATCAGTGAATGTGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCA
ACTTGTATTTGCCGTTTCCTAGGGGTTTTTTTATTTTTTTGGTTCATTGG
TGTTTTCATCTTTGCAATGAGAATCTAGTTGTTTACTTCNNAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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