EY756162
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756162 vs. ExPASy Swiss-Prot
Match: RL22_METM6 (50S ribosomal protein L22P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl22p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 49/150 (32.67%), Postives = 73/150 (48.67%), Query Frame = 1 Query: 109 VKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 558 +KY E D P + +A G LR+ K+ E + + L A YL V+A + +PF + K + GR+P K++ IL +L NA+ NAE KGL+ + L I HI N+ +R RA GR +P HI++ L Sbjct: 4 LKYKVEAD-PKNTARAMGRTLRISRKHAIELCRELSGMKLDAAVAYLNRVIALETPVPFKVHNKDL---PHRKGKIGTHSGRFPQKASLEILQVLDNAKKNAEQKGLNTEKLRIKHISSNRGFTIKRYMPRAFGRASPKNQETIHIQVIL 149
BLAST of EY756162 vs. ExPASy Swiss-Prot
Match: RL22_METM5 (50S ribosomal protein L22P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl22p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 49/150 (32.67%), Postives = 73/150 (48.67%), Query Frame = 1 Query: 109 VKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 558 +KY E D P + +A G LR+ K+ E + + L A YL V+A + +PF + K + GR+P K++ IL +L NA+ NAE KGL+ + L I HI N+ +R RA GR +P HI++ L Sbjct: 4 LKYKVEAD-PKNTARAMGRTLRISRKHAIELCRELSGMKLDAAVAYLNRVIALETPVPFKVHNKDL---PHRKGKIGTHSGRFPQKASLEILQVLDNAKKNAEQKGLNTEKLRIKHISSNRGFTIKRYMPRAFGRASPKNQETIHIQVIL 149
BLAST of EY756162 vs. ExPASy Swiss-Prot
Match: RL22_HALSA (50S ribosomal protein L22P OS=Halobacterium salinarium GN=rpl22p PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 8.327e-12 Identity = 42/151 (27.81%), Postives = 77/151 (50.99%), Query Frame = 1 Query: 109 VKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 561 + YS + D+ S KA + + K+++ A I + AK YL+ V+ ++++PF + GVG GR+P K++K L LL N +NA+ +G D D + I H+ ++ + + R RA GR + ++ C +E+ ++ Sbjct: 3 ISYSVDVDSEA-SAKAMLRERSISLKHSKAIAREISGETVADAKEYLQAVIDEERSVPFKQHNSGVGHRNDIDGWDA---GRYPEKASKDFLKLLSNVSNNADQQGFDADEMVIEHVAPHKVGESQGRKPRAMGRATTWNATLCDVEIVVT 149
BLAST of EY756162 vs. ExPASy Swiss-Prot
Match: RL22_METS5 (50S ribosomal protein L22P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl22p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.420e-11 Identity = 40/126 (31.75%), Postives = 66/126 (52.38%), Query Frame = 1 Query: 175 VHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 552 V K+ AIR + + +A+ +L+ VM K+A+P+ R+ G + + GR+P K+ K++ L+NA +NA+ KGLD D L + HI ++ +R RA GR + HIE+ Sbjct: 26 VSIKDLYNVCKAIRGMNVKEAQAFLQRVMEEKEALPYWRYDHGASHKSNISRKWKVKSGRYPKKAIKYVNKALENALANAQGKGLDEDKLKVVHIAAHKGIIIKRFMPRAFGRATKKYNRTSHIEV 151
BLAST of EY756162 vs. ExPASy Swiss-Prot
Match: RL22_PYRAE (50S ribosomal protein L22P OS=Pyrobaculum aerophilum GN=rpl22p PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.164e-11 Identity = 44/139 (31.65%), Postives = 69/139 (49.64%), Query Frame = 1 Query: 136 PTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 552 P + +A + R+ +K + E A I+ + L +AK +LEDV+ K+ +P F A P +WPVK A+ L +L+N E+NA +GLDVD + I H ++ K RA GR + ++EL Sbjct: 28 PEQIARAYAPEQRMSWKKSVEVARFIKGMTLKQAKTWLEDVVKLKRPVPIKTFKKKQAHHATPWEGWP--VAKWPVKVARRFLQVLENLENNARFRGLDVDRVVIVHAAAHKGFKIPNIMPRAFGRATRFDEQTVNVEL 164
BLAST of EY756162 vs. ExPASy Swiss-Prot
Match: RL22_THENV (50S ribosomal protein L22P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl22p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.133e-11 Identity = 43/134 (32.09%), Postives = 68/134 (50.75%), Query Frame = 1 Query: 151 KARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 552 KA + ++ +K + E A I + L +AK +LEDV+ K+ IP F A + P +WPVK A+ LDLL+N E+NA +GLDV+ + I H ++ + RA GR + ++E+ Sbjct: 33 KAYAPEQKMSWKKSVEVARFIEGMTLRQAKSWLEDVVKMKRPIPIRTFKKKQAHHATPWSGWP--VAKWPVKVARRFLDLLENLENNARFRGLDVERVVIVHAAAHKGYRIHNIMPRAFGRATRFDEQTVNVEV 164
BLAST of EY756162 vs. ExPASy Swiss-Prot
Match: RL22_PYRIL (50S ribosomal protein L22P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl22p PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.133e-11 Identity = 43/134 (32.09%), Postives = 70/134 (52.24%), Query Frame = 1 Query: 151 KARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 552 +A + ++ +K + E A I+ + L +AK +LEDV+ K+ IP F A + P +WPVK AK LDLL+N E+NA+ +GLDV+ + I H ++ + RA GR + ++E+ Sbjct: 33 RAYAPEQKMSWKKSVEVARFIKGMTLRQAKSWLEDVVKMKRPIPIKTFKKKQAHHAVPWSGWP--VAKWPVKVAKRFLDLLENLENNAKFRGLDVERVVIVHAAAHKGYRIPNIMPRAFGRATRFDEQTVNVEV 164
BLAST of EY756162 vs. ExPASy Swiss-Prot
Match: RL22_METHJ (50S ribosomal protein L22P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl22p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.206e-11 Identity = 47/136 (34.56%), Postives = 67/136 (49.26%), Query Frame = 1 Query: 151 KARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 558 + R ++ + K+ E A IR + L A YLE V+A ++ IPF RF V K GR+P K+++ L LL N NAE GL+ D L I H+ N+ ++R RA GR P +IEL + Sbjct: 17 RGRVNEAPISPKHAIEIAGFIRGMKLDDAAAYLEGVVALQKPIPFKRFNRNV---PHRKGLVGWDAGRYPQKASRVYLRLLNNVRKNAEYNGLEGDQLRIVHVSANRGIRRRSFMPRAMGRATPKDRQTVNIELVV 149 The following BLAST results are available for this feature:
BLAST of EY756162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756162 ID=EY756162; Name=EY756162; organism=Citrus sinensis; type=EST; length=867bpback to top |