EY756158

Overview
NameEY756158
Unique NameEY756158
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9730 contig Csv1_Contig9730:425..1099. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756158 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.000e-11
Identity = 48/153 (31.37%), Postives = 71/153 (46.41%), Query Frame = 2
Query:   32 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGA-LAAAAYHQYIL 484
            ++  R+  Y+ AQ L +     L    +++    +    +T+ SG      L  EII TF L++ V++   DP+ S     VP   PL  G  V    +A    +G  +NPARSFG A+       W  HWI+W+GP +G  LA   Y    L
Sbjct:   98 ITAFRSALYVAAQLLAS----SLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPRSS-----VPGFGPLLTGLIVGANTIAGGNFSGASMNPARSFGPALATG---VWTHHWIYWLGPLIGGPLAGLVYESLFL 238          
BLAST of EY756158 vs. ExPASy Swiss-Prot
Match: SIP11_ORYSJ (Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica GN=SIP1-1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.000e-11
Identity = 44/154 (28.57%), Postives = 70/154 (45.45%), Query Frame = 2
Query:    2 HASGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAA 463
            HA+GL   R  SL        AQ  GA+ G   +   M  +Y  + GG +      + G+A  AE++ TFV+   V          +    P++    +  +   + L     TG  +NPA +FG A + N    W+  +++W+ PFVGA+ AA
Sbjct:   82 HAAGLSSPRHSSLFPLALRFPAQAAGAVGGAMAISELMPEQYKHMLGGPSLKVD-LHTGAA--AELVLTFVITLAVLWII-----VKGPRNPIVKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAA 227          
BLAST of EY756158 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 2.613e-11
Identity = 49/161 (30.43%), Postives = 81/161 (50.31%), Query Frame = 2
Query:   11 GLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAV---IYNNDKAWDDHWIFWVGPFVGALAAAAYHQYI 481
            GL+  +K      V Y++AQ LGA  G  +          ++GG GA     G +   A+ AE++GTF+L+ T+      +R+ +       A + IG  V  +      I+G+ +NPAR+FG  +   I+     W+ + I+ +GP VGA+ AA  +QY+
Sbjct:   88 GLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKG-----FAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYL 243          
BLAST of EY756158 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11
Identity = 46/156 (29.49%), Postives = 72/156 (46.15%), Query Frame = 2
Query:   32 VSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAA 496
            V+L R+  Y+ AQ L +     L++         L    + +A G      + AE + TF L++ +++   DP++      +P   PL  G  V    +A   ++G  +NPARSFG AV       W  HW++WVGP  G   A   ++    AAA
Sbjct:   95 VTLFRSSLYIAAQMLASSAACFLLRWLT----GGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKL-----LPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASG---VWTHHWVYWVGPLAGGPLAVLVYECCFMAAA 238          
BLAST of EY756158 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 45/156 (28.85%), Postives = 83/156 (53.21%), Query Frame = 2
Query:   20 LARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYIL 484
            +A ++S+  A+ Y  +Q + ++    ++K  +  ++  +      +A       A   E +  FVLVYTVF+A+DP+R      +P+ + P+ IGF      LA  P +G  +NPA +FG+A++Y + K   +  ++WVGP +G   AA  +  ++
Sbjct:   96 VAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPI----YKIAGEMTGFGASVLEGVLAFVLVYTVFTASDPRRG-----LPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFK---NQAVYWVGPLLGGATAALVYDNVV 239          
BLAST of EY756158 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.820e-11
Identity = 45/160 (28.12%), Postives = 76/160 (47.50%), Query Frame = 2
Query:   11 GLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFV-GALAAAAYHQYIL 484
            G+ +   ++ +RA+ Y+ AQ L +     L    +++    +    + + +G      L  E+I TF L++  ++   DP+     S V  + PL  G  V    LA    TG  +NPARSFG A+       W +HW++W+GP + G+LA   Y    +
Sbjct:   97 GILVRGHITKLRALLYVAAQLLAS----SLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATG---VWTNHWVYWIGPLLGGSLAGFVYESLFM 244          
BLAST of EY756158 vs. ExPASy Swiss-Prot
Match: AQPM_ARCFU (Probable aquaporin aqpM OS=Archaeoglobus fulgidus GN=aqpM PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.928e-11
Identity = 56/165 (33.94%), Postives = 78/165 (47.27%), Query Frame = 2
Query:   11 GLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNND-----KAWDDHWIFWVGPFVGALAAAAYHQYILR 487
            G F  R+V     V Y+VAQ +GA  G  L  A +     ++GG GA     G   G A+  E IGTF+L+  +      +R+      P  A L IG  V  +      ITG+ +NPAR+FG    Y  D       W    I+ +GP VGA+AAA  + Y+ +
Sbjct:   94 GRFPGREV-----VPYIVAQFIGAALGSLLFLACVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAP-----PGFAGLVIGLTVGGIITTIGNITGSSLNPARTFGP---YLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLYNYLAK 245          
The following BLAST results are available for this feature:
BLAST of EY756158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
TIP41_ORYSJ2.000e-1131.37Probable aquaporin TIP4-1 OS=Oryza sativa subsp. j... [more]
SIP11_ORYSJ2.000e-1128.57Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica G... [more]
AQPM_METTM2.613e-1130.43Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
TIP43_MAIZE3.412e-1129.49Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
TIP51_ARATH4.457e-1128.85Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
TIP42_MAIZE5.820e-1128.13Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1[more]
AQPM_ARCFU9.928e-1133.94Probable aquaporin aqpM OS=Archaeoglobus fulgidus ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-C11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756158 ID=EY756158; Name=EY756158; organism=Citrus sinensis; type=EST; length=664bp
CCACGCGTCCGGGCTGTTCTTGGCAAGGAAGGTATCATTGATCAGGGCTG
TGGCTTACATGGTGGCTCAGTGCTTGGGTGCCATTTGCGGTGTTGGTTTG
GTCAAGGCCTTCATGAAGCATGAGTACAACTCACTTGGTGGTGGTGCTAA
CACTGTGGCTTCTGGCTACAACAAAGGATCAGCCTTGGGTGCTGAGATTA
TTGGTACCTTCGTGCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAG
AGAAGCGCTCGTGACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGG
ATTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCCATCACTGGAACGG
GCATCAACCCTGCTAGGAGCTTTGGTGCTGCTGTTATCTACAACAATGAC
AAGGCCTGGGATGACCATTGGATCTTCTGGGTTGGTCCTTTCGTTGGAGC
ATTGGCTGCAGCGGCATACCACCAGTACATCTTGAGGGCTGCTGCTATCA
AGGCTTTGGGATCATTCCGCAGCAACCCTTCAAACTAAGAAAGCAAATTA
TGATGAATATGAACCACCAACCAGAATAGCTTTTTCCTTTCTCTCTTTCT
GTTATTTGTTCGCTTGTGTCTATTATGAGATGATGTTTGCTATGATAATT
ATGACCCTTCTCTT
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