EY756141

Overview
NameEY756141
Unique NameEY756141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_SPOFR (60S ribosomal protein L9 OS=Spodoptera frugiperda GN=RpL9 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.360e-50
Identity = 95/173 (54.91%), Postives = 126/173 (72.83%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MK I++++ ++IPEG+ V + ++++ V+GPRG L RNFKHL +D  ++       R LK++ WFGS+K  AA+RT  SHV+N+I GVTKG++YKMR VYAHFPIN      +  IEIRNFLGEK +RRV+M  GVTV+ S K KDELI++GN +E VS SAALI Q   VKNK
Sbjct:    1 MKQIVANQKVKIPEGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-----RVLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRSVYAHFPINCVTTEGNSVIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNK 168          

HSP 2 Score: 28.8758 bits (63), Expect = 5.360e-50
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEK 612
            DI KFLDG+YVSEK
Sbjct:  169 DIRKFLDGLYVSEK 182          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_DROME (60S ribosomal protein L9 OS=Drosophila melanogaster GN=RpL9 PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 7.588e-49
Identity = 93/173 (53.76%), Postives = 124/173 (71.68%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            M+TI S++ ++IP+ +K  + A+++ + G RG L R+FKHL LD ++       KR LK++ WFG++K  AA+RT  SH++N+I GVT G++YKMR VYAHFPIN   +  +  IEIRNFLGEK +RRVEM  GVTV+ S   KDELI++GNDIE VS SAALI Q   VKNK
Sbjct:    1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYM-----PDKRTLKVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNK 168          

HSP 2 Score: 30.0314 bits (66), Expect = 7.588e-49
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEKGHIV 624
            DI KFLDG+YVSEK  +V
Sbjct:  169 DIRKFLDGLYVSEKTTVV 186          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_DICDI (60S ribosomal protein L9 OS=Dictyostelium discoideum GN=rpl9 PE=1 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 2.190e-48
Identity = 88/173 (50.87%), Postives = 124/173 (71.68%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MK I SS  ++IPE V V +  + ++V GPRG LS++F H ++D +L+     GK+ L +D WFG+RK  A I+T  S ++N+ITGVTKGY YKMRFVYAHFPIN ++ +  + +EIRNF GEK VRR+E+LDG+T  R++K KDE++L GN +EL+S+S A I  +  +K K
Sbjct:    1 MKVINSSRKVQIPENVTVDVKGRSVKVTGPRGTLSKSFDHASVDINLV-----GKKELTVDLWFGNRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIKYK 168          

HSP 2 Score: 28.1054 bits (61), Expect = 2.190e-48
Identity = 11/14 (78.57%), Postives = 13/14 (92.86%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEK 612
            D+ KFLDGIYVSE+
Sbjct:  169 DVRKFLDGIYVSER 182          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.030e-47
Identity = 99/192 (51.56%), Postives = 128/192 (66.67%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKISXNS*TGSMSVRRGTLLE 628
            MKTILS++T++IP+ V V +  + + V+GPRG L R F H+NL+  L+   +   ++L++D W+G+RK  A +RT  SHVQN+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +RRV M  GV    S   KDEL+L+GNDIELVS SAALI Q   VKNK       G     +GT++E
Sbjct:    1 MKTILSTQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKKQ---KKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVVE 189          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9B_YEAST (60S ribosomal protein L9-B OS=Saccharomyces cerevisiae GN=RPL9B PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.264e-45
Identity = 89/175 (50.86%), Postives = 122/175 (69.71%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANAD--KSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MK I + + +EIPEGV V I ++I++V GPRG L++N KH+++ F      +   + +K+    G RK  AA+RT  S V N+ITGVTKGY+YKMR+VYAHFPIN +I   D  K IE+RNFLG+KK+R V + DGVT+  S  VKDE++L GN +E VS++AA + Q C V+NK
Sbjct:    1 MKYIQTEQQIEIPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFT-----KVNNQLIKVAVHNGDRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNK 170          

HSP 2 Score: 32.7278 bits (73), Expect = 1.264e-45
Identity = 15/18 (83.33%), Postives = 15/18 (83.33%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEKGHIV 624
            DI KFLDGIYVS KG IV
Sbjct:  171 DIRKFLDGIYVSHKGFIV 188          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_CAEEL (60S ribosomal protein L9 OS=Caenorhabditis elegans GN=rpl-9 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.147e-45
Identity = 83/173 (47.98%), Postives = 120/173 (69.36%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MK I S++T+  PEGV   +  +I+ V GPRG + ++F+HL+++   +     GK  L++  WFG RK  AAIRT  SH++N+I GVT G+RYKMR VYAHFPIN ++ + ++++EIRNFLGEK VRRV + +GV    S   KDE++++GND++ VS++AA I Q   VK K
Sbjct:    1 MKLIESNDTVVFPEGVTFTVKNRIVHVTGPRGTIRKDFRHLHMEMERI-----GKSTLRVRKWFGVRKELAAIRTVCSHIKNMIKGVTVGFRYKMRSVYAHFPINVTLQDGNRTVEIRNFLGEKIVRRVPLPEGVIATISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEK 168          

HSP 2 Score: 33.8834 bits (76), Expect = 2.147e-45
Identity = 18/30 (60.00%), Postives = 19/30 (63.33%), Query Frame = 1
Query:  544 QSEMPCEE*DIXKFLDGIYVSEKGHIVGED 633
            Q     +E DI KFLDGIYVSEK  IV  D
Sbjct:  160 QQSTAVKEKDIRKFLDGIYVSEKTTIVPTD 189          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9A_YEAST (60S ribosomal protein L9-A OS=Saccharomyces cerevisiae GN=RPL9A PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 4.751e-45
Identity = 88/175 (50.29%), Postives = 122/175 (69.71%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANAD--KSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            MK I + + +E+PEGV V I ++I++V GPRG L++N KH+++ F      +   + +K+    G RK  AA+RT  S V N+ITGVTKGY+YKMR+VYAHFPIN +I   D  K IE+RNFLG+KK+R V + DGVT+  S  VKDE++L GN +E VS++AA + Q C V+NK
Sbjct:    1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFT-----KVNNQLIKVAVHNGGRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNK 170          

HSP 2 Score: 31.187 bits (69), Expect = 4.751e-45
Identity = 14/17 (82.35%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEKGHI 621
            DI KFLDGIYVS KG I
Sbjct:  171 DIRKFLDGIYVSHKGFI 187          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9B_SCHPO (60S ribosomal protein L9-B OS=Schizosaccharomyces pombe GN=rpl9b PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.717e-40
Identity = 91/191 (47.64%), Postives = 120/191 (62.83%), Query Frame = 2
Query:   56 KTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKISXNS*TGSMSVRRGTLLE 628
            + I   ET+ IPEGV V I A+++ V+GPRG L +N + +  D  L   G T    +K   W GSRK +A IRTA S + N+I GVT+G+RYKMR VYAHFPIN ++      +EIRNFLGE+  R ++ L GVTV  S  VKDE+I++GN +E VS+SAA I Q C+V+NK       G     RG + E
Sbjct:    3 RDIYKDETLTIPEGVSVDIKARLVTVKGPRGVLKQNLRRV--DIELKKQGNT----IKFIVWHGSRKHNACIRTAYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNIEE 187          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9A_SCHPO (60S ribosomal protein L9-A OS=Schizosaccharomyces pombe GN=rpl9a PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 5.123e-39
Identity = 89/191 (46.60%), Postives = 118/191 (61.78%), Query Frame = 2
Query:   56 KTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNKISXNS*TGSMSVRRGTLLE 628
            + I   ET+ IP+GV V I A+ + V GPRG L +N +H+  D  +   G T    +K   W GSRK +A IR+  S + N+I GVT+G+RYKMR VYAHFPIN ++      +EIRNFLGE+  R ++ L GVTV  S  VKDE+IL+GN +E VS+SAA I Q C+V+NK       G     RG + E
Sbjct:    3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHV--DIEMKKQGNT----IKFIVWHGSRKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNIEE 187          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL9_HAECO (60S ribosomal protein L9 (Fragment) OS=Haemonchus contortus PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 7.165e-33
Identity = 65/131 (49.62%), Postives = 93/131 (70.99%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEM 445
            MK + S++T++ P+GV   +  +++ V GPRG L R+F+HL+++         GK +L++  WFG RK  AAIRT  SH+QN+I GVTKG+RYKMR VYAHFPIN ++ +  +++EIRNFLGEK VR V +
Sbjct:    1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEME-----RVGKNQLRVRKWFGVRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126          
The following BLAST results are available for this feature:
BLAST of EY756141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
RL9_SPOFR5.360e-5054.9160S ribosomal protein L9 OS=Spodoptera frugiperda ... [more]
RL9_DROME7.588e-4953.7660S ribosomal protein L9 OS=Drosophila melanogaste... [more]
RL9_DICDI2.190e-4850.8760S ribosomal protein L9 OS=Dictyostelium discoide... [more]
RL9_ICTPU1.030e-4751.5660S ribosomal protein L9 OS=Ictalurus punctatus GN... [more]
RL9B_YEAST1.264e-4550.8660S ribosomal protein L9-B OS=Saccharomyces cerevi... [more]
RL9_CAEEL2.147e-4547.9860S ribosomal protein L9 OS=Caenorhabditis elegans... [more]
RL9A_YEAST4.751e-4550.2960S ribosomal protein L9-A OS=Saccharomyces cerevi... [more]
RL9B_SCHPO2.717e-4047.6460S ribosomal protein L9-B OS=Schizosaccharomyces ... [more]
RL9A_SCHPO5.123e-3946.6060S ribosomal protein L9-A OS=Schizosaccharomyces ... [more]
RL9_HAECO7.165e-3349.6260S ribosomal protein L9 (Fragment) OS=Haemonchus ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-B02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756141 ID=EY756141; Name=EY756141; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGGGAAGGAGCTGAGACGCAGCAGAGGCAGAGCAGCTTTCA
TCATGAAGACAATACTTTCTTCAGAGACGATGGAGATCCCAGAGGGGGTG
AAAGTAAAGATAAATGCGAAGATAATAGAAGTAGAAGGACCTAGAGGTAA
GCTTAGCCGCAATTTCAAGCATTTGAACCTAGACTTCCATCTCATGACTG
ATGGGGAAACTGGGAAGCGGAGGCTGAAGATCGACGCATGGTTTGGGTCT
CGCAAGACCAGTGCCGCCATCAGAACTGCCCTCAGCCATGTACAGAACCT
CATCACTGGGGTTACCAAGGGCTACCGTTACAAGATGAGATTCGTCTACG
CTCACTTTCCCATCAACGCCTCCATCGCCAACGCTGACAAGTCCATTGAG
ATCCGTAACTTTCTTGGAGAAAAGAAGGTTCGAAGAGTGGAAATGCTTGA
CGGTGTTACCGTTCTTCGGTCTGACAAGGTTAAGGATGAACTCATTCTTG
ATGGGAATGACATTGAACTTGTGTCGCGGTCCGCTGCTTTGATCAATCAG
AAATGCCATGTGAAGAATAAGATATCANGAAATTCTTAGACGGGATCTAT
GTCAGTGAGAAGGGGCACATTGTTGGAGAGGATTANGTAGCTTTCAAATT
TTATGTCACATTATTATCATGAAATTGGTATCAATCTTTGCTCTTTTGCC
CTGNGNTGGGGGAAGTCCTTTATTTTTTTTCGTTGGGATTTTGGTATTAG
AGAGTTTTGATTTCTGCTTCACTCATGTACCTTTGTTCCATATGGATCCA
ATGGATTTATACCTAAAAAAAAAAAAAAAAAAAAAAAGGGCGGGCGCTCA
AAGGATCCAACTTACGTAACCGGGATGCAACGCATAACTCTTCATAAGGG
CCCCAAAATCATTCCCTTGCCGCC
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