EY756141

Overview
NameEY756141
Unique NameEY756141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_HYPBU (50S ribosomal protein L6P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.225e-31
Identity = 72/173 (41.62%), Postives = 115/173 (66.47%), Query Frame = 2
Query:   56 KTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKV-KDELILDGNDIELVSRSAALINQKCHVKNK 571
            K +  +E + +PEGV+V I+   + V+GP+G+L+R+F H       + + E GK+ + ++A+F +R+  A + T  +H++N+ITGVTKG+RYK++ VY+HFP+   +   DK + I NFLGEK  R  +++ GVTV    KV KD++I++G DIE V ++AA I Q   VK+K
Sbjct:    3 KAVYVAEEVRVPEGVEVSIDGLKVTVKGPKGELTRDFSHARNIVIRLDEDEEGKK-VVVEAYFANRRVKALVGTIAAHIENMITGVTKGFRYKLKIVYSHFPVTVKV-QGDK-VVIENFLGEKAPRIAKIMPGVTV----KVQKDDVIVEGIDIEAVGQTAANIEQATKVKDK 168          

HSP 2 Score: 23.0978 bits (48), Expect = 2.225e-31
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1
Query:  583 FLDGIYVSEKG 615
            F+DGIY+ EKG
Sbjct:  173 FIDGIYIYEKG 183          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_IGNH4 (50S ribosomal protein L6P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.806e-29
Identity = 63/165 (38.18%), Postives = 106/165 (64.24%), Query Frame = 2
Query:   56 KTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQ 550
            K +     +++PEGV+V++    ++V GP+G+L R+F H      +    E GK+++ ++ +F +RK  A + T  +H++N+ITGVTKG+RYKM+ V++HFPI+  +      +EI NF+GEK  R  ++L GVTV    +   ++I++G DIE V+++AA I Q
Sbjct:    3 KAVWVHALVDVPEGVEVEVEGSKVKVRGPKGELERDFSHAK-GIRIRVVEEEGKKQVLVETFFANRKRKALVNTVAAHIKNMITGVTKGWRYKMKIVFSHFPISVKVVG--DRVEIHNFIGEKAPRVAKVLPGVTVKVQGR---DVIIEGTDIEKVAQTAANIEQ 161          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_DESK1 (50S ribosomal protein L6P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.467e-25
Identity = 59/167 (35.33%), Postives = 101/167 (60.48%), Query Frame = 2
Query:   71 SETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            +E +EIPE V V+++   + V+GP+G ++R+F H    F  + D     R + ++ +   RK  A + T  +H++N+ITGV +GYRYK++ +++HFPI  S+   +K + IRNF+GEK  R  ++   V V  S    +++I++G DIE V  +AA I +   V ++
Sbjct:    8 AEKVEIPENVAVEVDGLRVTVKGPKGIITRDFSHARGVFIRLED-----RVVIVETFVADRKQKALVGTIAAHIRNMITGVVRGYRYKLKIIFSHFPITVSVDEKNKVVRIRNFMGEKSDRIAKIYGNVKVKVSG---EDIIIEGVDIEEVGLTAASIERATRVTDR 166          

HSP 2 Score: 23.0978 bits (48), Expect = 4.467e-25
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1
Query:  583 FLDGIYVSEKG 615
            F+DGIY+ EKG
Sbjct:  171 FMDGIYIYEKG 181          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_STAMF (50S ribosomal protein L6P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.182e-25
Identity = 62/166 (37.35%), Postives = 103/166 (62.05%), Query Frame = 2
Query:   74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            E ++IPE V V+IN   ++V GP+G + R+F H+    +++   E  K  + ++ +F  R+  A + T  SH++N+I GV KGYRYK++ +Y+HFPI   + + ++ + I+NFLGEK   R+  + G  V  + K +D +I++G DIE V ++AA I     VK+K
Sbjct:    9 EEIDIPENVTVEINGLKVKVNGPKGSIERDFSHVR---NIILRKENSK--IIVETFFADRRKKALVGTIASHIENMIKGVLKGYRYKLKIIYSHFPITVEVDDRNRIVRIKNFLGEKS-DRIAKIIGEDVKVTVKGED-IIVEGIDIEHVGQTAANIELATKVKDK 167          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_SULTO (50S ribosomal protein L6P OS=Sulfolobus tokodaii GN=rpl6p PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.729e-24
Identity = 55/165 (33.33%), Postives = 101/165 (61.21%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALI 544
            MK +   E +EIP+G+ V I    I+V+GP+G++ ++F H++       +      ++ ++  F  R+  A   + ++H++N+ TGVTKGYRY ++ +Y HFP+   ++     ++I+N +GEK +RR +++ GV V     VK +++I++G DIE V ++AA I
Sbjct:    1 MKAVHLYEEIEIPQGINVNIEGMKIKVKGPKGEIEKDFSHIS-----GIEIRKEDNKIVVETTFADRRKKAQFYSIIAHIENMFTGVTKGYRYYLKIIYTHFPVTVKVSG--NEVQIQNLIGEKNIRRAKIMTGVKV----NVKGEDIIVEGQDIEKVGQTAANI 154          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_SULSO (50S ribosomal protein L6P OS=Sulfolobus solfataricus GN=rpl6p PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.498e-22
Identity = 52/164 (31.71%), Postives = 100/164 (60.98%), Query Frame = 2
Query:   53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALI 544
            M+ ++  E +EIP+ V V +   II+++GP+G++ ++F        +  DG     ++ ++  F +R+  A   + +SH++N+ITGVTKGYRY ++ +Y HFP +  +      ++I N +GEK  RR ++L+GV V       ++++++G ++E V+++AA I
Sbjct:    1 MQIVILREEIEIPKNVVVDLKGSIIKIKGPKGEVVKDFSFAK-GIQISLDGN----KIVLETTFANRRKKAVFYSIVSHIKNMITGVTKGYRYYLKIIYTHFPTSVKVVG--NEVQITNLIGEKNTRRAQILEGVKVTVKG---EDIVVEGPNLEAVAQTAANI 154          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_PYRKO (50S ribosomal protein L6P OS=Pyrococcus kodakaraensis GN=rpl6p PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.498e-22
Identity = 63/164 (38.41%), Postives = 98/164 (59.76%), Query Frame = 2
Query:   74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHV 562
            E +EIPEGV+V +    ++V+GP+G+L R  K+  +        E GK  + I   F  +K  A +RT  +H+ N+I GVT+G++Y+++ VY+HFP+   +   +  + I NFLGEK  RR ++L GVTV    KVK  E+ ++G D E V ++AA I Q   +
Sbjct:    9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFT----EDGK--VVIYKEFPRKKDVAIVRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTVKVQGDE--VVIENFLGEKNPRRAKILPGVTV----KVKGSEIEVEGIDKEAVGQTAANIEQATRI 160          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_THEON (50S ribosomal protein L6P OS=Thermococcus onnurineus (strain NA1) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.956e-22
Identity = 63/163 (38.65%), Postives = 95/163 (58.28%), Query Frame = 2
Query:   74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHV 562
            E +EIPEGV+V I   +++V GP+G+L R  K+  +        E GK  + I   F  +K  A  RT  +H+ N+I GVT+G+ YK++ VY+HFP+   +   +  + I NFLGEK  RR ++L GVTV     +  E+I++G D E V ++AA I Q   +
Sbjct:    9 EEVEIPEGVEVTIERNVVKVRGPKGELERELKYPGVQIFT----EDGK--VVIYKEFPRKKDIAIARTFKAHIANMIKGVTEGFTYKLKVVYSHFPMTVKVQGDE--VVIENFLGEKNPRRAKILPGVTV---KVMGSEVIVEGIDKEAVGQTAANIEQATRI 160          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_PYRAB (50S ribosomal protein L6P OS=Pyrococcus abyssi GN=rpl6p PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.956e-22
Identity = 66/164 (40.24%), Postives = 97/164 (59.15%), Query Frame = 2
Query:   74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHV 562
            E +EIPEGV+V +    ++V+GP+G++ R      +   +    E GK  +  D  F  RK  A +RT  +H+ N+I GVT+G+ YK++ VY+HFPI   +   +  IE  NFLGEK  RR ++L GVTV    KVK  E+I++G D E V ++AA I Q   +
Sbjct:    9 EEIEIPEGVEVSVQGNTVKVKGPKGEVERELFWPGVKIFV----EGGKVVIYKD--FPRRKDVAIVRTFKAHINNMIKGVTEGFTYKLKVVYSHFPITVKVQGDEVIIE--NFLGEKAPRRAKILPGVTV----KVKGQEIIVEGIDKEAVGQTAANIEQATRI 160          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_AERPE (50S ribosomal protein L6P OS=Aeropyrum pernix GN=rpl6p PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.209e-22
Identity = 60/167 (35.93%), Postives = 99/167 (59.28%), Query Frame = 2
Query:   74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNK 571
            E +E+PEGV V I+   ++V GP+G++ R+F H       + D       + ++++F   +  A +     H++N+I GV  G+RYK++ +Y+HFPIN  +   DK I I NFLGEK +R   ++ GV V    +VK  ++I++G D+E V+++AA I     VK+K
Sbjct:    9 ERVEVPEGVTVSIDGMRVKVSGPKGEVERDFSHARGVLIRLEDNS-----VVVESFFAKARQRALVGAIAGHIRNMIKGVQGGFRYKLKIMYSHFPINVKV-EGDKFI-ISNFLGEKGLRIARIMPGVKV----QVKGSDVIVEGIDVEKVAQTAANIELATKVKDK 164          

HSP 2 Score: 22.3274 bits (46), Expect = 4.209e-22
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  571 DIXKFLDGIYVSEK 612
            D  KF+DGIY+ E+
Sbjct:  165 DRRKFMDGIYIYER 178          
The following BLAST results are available for this feature:
BLAST of EY756141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
RL6_HYPBU2.225e-3141.6250S ribosomal protein L6P OS=Hyperthermus butylicu... [more]
RL6_IGNH44.806e-2938.1850S ribosomal protein L6P OS=Ignicoccus hospitalis... [more]
RL6_DESK14.467e-2535.3350S ribosomal protein L6P OS=Desulfurococcus kamch... [more]
RL6_STAMF7.182e-2537.3550S ribosomal protein L6P OS=Staphylothermus marin... [more]
RL6_SULTO2.729e-2433.3350S ribosomal protein L6P OS=Sulfolobus tokodaii G... [more]
RL6_SULSO1.498e-2231.7150S ribosomal protein L6P OS=Sulfolobus solfataric... [more]
RL6_PYRKO1.498e-2238.4150S ribosomal protein L6P OS=Pyrococcus kodakaraen... [more]
RL6_THEON1.956e-2238.6550S ribosomal protein L6P OS=Thermococcus onnurine... [more]
RL6_PYRAB1.956e-2240.2450S ribosomal protein L6P OS=Pyrococcus abyssi GN=... [more]
RL6_AERPE4.209e-2235.9350S ribosomal protein L6P OS=Aeropyrum pernix GN=r... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-B02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756141 ID=EY756141; Name=EY756141; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGGGAAGGAGCTGAGACGCAGCAGAGGCAGAGCAGCTTTCA
TCATGAAGACAATACTTTCTTCAGAGACGATGGAGATCCCAGAGGGGGTG
AAAGTAAAGATAAATGCGAAGATAATAGAAGTAGAAGGACCTAGAGGTAA
GCTTAGCCGCAATTTCAAGCATTTGAACCTAGACTTCCATCTCATGACTG
ATGGGGAAACTGGGAAGCGGAGGCTGAAGATCGACGCATGGTTTGGGTCT
CGCAAGACCAGTGCCGCCATCAGAACTGCCCTCAGCCATGTACAGAACCT
CATCACTGGGGTTACCAAGGGCTACCGTTACAAGATGAGATTCGTCTACG
CTCACTTTCCCATCAACGCCTCCATCGCCAACGCTGACAAGTCCATTGAG
ATCCGTAACTTTCTTGGAGAAAAGAAGGTTCGAAGAGTGGAAATGCTTGA
CGGTGTTACCGTTCTTCGGTCTGACAAGGTTAAGGATGAACTCATTCTTG
ATGGGAATGACATTGAACTTGTGTCGCGGTCCGCTGCTTTGATCAATCAG
AAATGCCATGTGAAGAATAAGATATCANGAAATTCTTAGACGGGATCTAT
GTCAGTGAGAAGGGGCACATTGTTGGAGAGGATTANGTAGCTTTCAAATT
TTATGTCACATTATTATCATGAAATTGGTATCAATCTTTGCTCTTTTGCC
CTGNGNTGGGGGAAGTCCTTTATTTTTTTTCGTTGGGATTTTGGTATTAG
AGAGTTTTGATTTCTGCTTCACTCATGTACCTTTGTTCCATATGGATCCA
ATGGATTTATACCTAAAAAAAAAAAAAAAAAAAAAAAGGGCGGGCGCTCA
AAGGATCCAACTTACGTAACCGGGATGCAACGCATAACTCTTCATAAGGG
CCCCAAAATCATTCCCTTGCCGCC
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