EY756141
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_HYPBU (50S ribosomal protein L6P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl6p PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.225e-31 Identity = 72/173 (41.62%), Postives = 115/173 (66.47%), Query Frame = 2 Query: 56 KTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKV-KDELILDGNDIELVSRSAALINQKCHVKNK 571 K + +E + +PEGV+V I+ + V+GP+G+L+R+F H + + E GK+ + ++A+F +R+ A + T +H++N+ITGVTKG+RYK++ VY+HFP+ + DK + I NFLGEK R +++ GVTV KV KD++I++G DIE V ++AA I Q VK+K Sbjct: 3 KAVYVAEEVRVPEGVEVSIDGLKVTVKGPKGELTRDFSHARNIVIRLDEDEEGKK-VVVEAYFANRRVKALVGTIAAHIENMITGVTKGFRYKLKIVYSHFPVTVKV-QGDK-VVIENFLGEKAPRIAKIMPGVTV----KVQKDDVIVEGIDIEAVGQTAANIEQATKVKDK 168 HSP 2 Score: 23.0978 bits (48), Expect = 2.225e-31 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 583 FLDGIYVSEKG 615 F+DGIY+ EKG Sbjct: 173 FIDGIYIYEKG 183
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_IGNH4 (50S ribosomal protein L6P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl6p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.806e-29 Identity = 63/165 (38.18%), Postives = 106/165 (64.24%), Query Frame = 2 Query: 56 KTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQ 550 K + +++PEGV+V++ ++V GP+G+L R+F H + E GK+++ ++ +F +RK A + T +H++N+ITGVTKG+RYKM+ V++HFPI+ + +EI NF+GEK R ++L GVTV + ++I++G DIE V+++AA I Q Sbjct: 3 KAVWVHALVDVPEGVEVEVEGSKVKVRGPKGELERDFSHAK-GIRIRVVEEEGKKQVLVETFFANRKRKALVNTVAAHIKNMITGVTKGWRYKMKIVFSHFPISVKVVG--DRVEIHNFIGEKAPRVAKVLPGVTVKVQGR---DVIIEGTDIEKVAQTAANIEQ 161
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_DESK1 (50S ribosomal protein L6P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl6p PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.467e-25 Identity = 59/167 (35.33%), Postives = 101/167 (60.48%), Query Frame = 2 Query: 71 SETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 +E +EIPE V V+++ + V+GP+G ++R+F H F + D R + ++ + RK A + T +H++N+ITGV +GYRYK++ +++HFPI S+ +K + IRNF+GEK R ++ V V S +++I++G DIE V +AA I + V ++ Sbjct: 8 AEKVEIPENVAVEVDGLRVTVKGPKGIITRDFSHARGVFIRLED-----RVVIVETFVADRKQKALVGTIAAHIRNMITGVVRGYRYKLKIIFSHFPITVSVDEKNKVVRIRNFMGEKSDRIAKIYGNVKVKVSG---EDIIIEGVDIEEVGLTAASIERATRVTDR 166 HSP 2 Score: 23.0978 bits (48), Expect = 4.467e-25 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 583 FLDGIYVSEKG 615 F+DGIY+ EKG Sbjct: 171 FMDGIYIYEKG 181
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_STAMF (50S ribosomal protein L6P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl6p PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.182e-25 Identity = 62/166 (37.35%), Postives = 103/166 (62.05%), Query Frame = 2 Query: 74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 E ++IPE V V+IN ++V GP+G + R+F H+ +++ E K + ++ +F R+ A + T SH++N+I GV KGYRYK++ +Y+HFPI + + ++ + I+NFLGEK R+ + G V + K +D +I++G DIE V ++AA I VK+K Sbjct: 9 EEIDIPENVTVEINGLKVKVNGPKGSIERDFSHVR---NIILRKENSK--IIVETFFADRRKKALVGTIASHIENMIKGVLKGYRYKLKIIYSHFPITVEVDDRNRIVRIKNFLGEKS-DRIAKIIGEDVKVTVKGED-IIVEGIDIEHVGQTAANIELATKVKDK 167
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_SULTO (50S ribosomal protein L6P OS=Sulfolobus tokodaii GN=rpl6p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.729e-24 Identity = 55/165 (33.33%), Postives = 101/165 (61.21%), Query Frame = 2 Query: 53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALI 544 MK + E +EIP+G+ V I I+V+GP+G++ ++F H++ + ++ ++ F R+ A + ++H++N+ TGVTKGYRY ++ +Y HFP+ ++ ++I+N +GEK +RR +++ GV V VK +++I++G DIE V ++AA I Sbjct: 1 MKAVHLYEEIEIPQGINVNIEGMKIKVKGPKGEIEKDFSHIS-----GIEIRKEDNKIVVETTFADRRKKAQFYSIIAHIENMFTGVTKGYRYYLKIIYTHFPVTVKVSG--NEVQIQNLIGEKNIRRAKIMTGVKV----NVKGEDIIVEGQDIEKVGQTAANI 154
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_SULSO (50S ribosomal protein L6P OS=Sulfolobus solfataricus GN=rpl6p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.498e-22 Identity = 52/164 (31.71%), Postives = 100/164 (60.98%), Query Frame = 2 Query: 53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALI 544 M+ ++ E +EIP+ V V + II+++GP+G++ ++F + DG ++ ++ F +R+ A + +SH++N+ITGVTKGYRY ++ +Y HFP + + ++I N +GEK RR ++L+GV V ++++++G ++E V+++AA I Sbjct: 1 MQIVILREEIEIPKNVVVDLKGSIIKIKGPKGEVVKDFSFAK-GIQISLDGN----KIVLETTFANRRKKAVFYSIVSHIKNMITGVTKGYRYYLKIIYTHFPTSVKVVG--NEVQITNLIGEKNTRRAQILEGVKVTVKG---EDIVVEGPNLEAVAQTAANI 154
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_PYRKO (50S ribosomal protein L6P OS=Pyrococcus kodakaraensis GN=rpl6p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.498e-22 Identity = 63/164 (38.41%), Postives = 98/164 (59.76%), Query Frame = 2 Query: 74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHV 562 E +EIPEGV+V + ++V+GP+G+L R K+ + E GK + I F +K A +RT +H+ N+I GVT+G++Y+++ VY+HFP+ + + + I NFLGEK RR ++L GVTV KVK E+ ++G D E V ++AA I Q + Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFT----EDGK--VVIYKEFPRKKDVAIVRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTVKVQGDE--VVIENFLGEKNPRRAKILPGVTV----KVKGSEIEVEGIDKEAVGQTAANIEQATRI 160
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_THEON (50S ribosomal protein L6P OS=Thermococcus onnurineus (strain NA1) GN=rpl6p PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.956e-22 Identity = 63/163 (38.65%), Postives = 95/163 (58.28%), Query Frame = 2 Query: 74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHV 562 E +EIPEGV+V I +++V GP+G+L R K+ + E GK + I F +K A RT +H+ N+I GVT+G+ YK++ VY+HFP+ + + + I NFLGEK RR ++L GVTV + E+I++G D E V ++AA I Q + Sbjct: 9 EEVEIPEGVEVTIERNVVKVRGPKGELERELKYPGVQIFT----EDGK--VVIYKEFPRKKDIAIARTFKAHIANMIKGVTEGFTYKLKVVYSHFPMTVKVQGDE--VVIENFLGEKNPRRAKILPGVTV---KVMGSEVIVEGIDKEAVGQTAANIEQATRI 160
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_PYRAB (50S ribosomal protein L6P OS=Pyrococcus abyssi GN=rpl6p PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.956e-22 Identity = 66/164 (40.24%), Postives = 97/164 (59.15%), Query Frame = 2 Query: 74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHV 562 E +EIPEGV+V + ++V+GP+G++ R + + E GK + D F RK A +RT +H+ N+I GVT+G+ YK++ VY+HFPI + + IE NFLGEK RR ++L GVTV KVK E+I++G D E V ++AA I Q + Sbjct: 9 EEIEIPEGVEVSVQGNTVKVKGPKGEVERELFWPGVKIFV----EGGKVVIYKD--FPRRKDVAIVRTFKAHINNMIKGVTEGFTYKLKVVYSHFPITVKVQGDEVIIE--NFLGEKAPRRAKILPGVTV----KVKGQEIIVEGIDKEAVGQTAANIEQATRI 160
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_AERPE (50S ribosomal protein L6P OS=Aeropyrum pernix GN=rpl6p PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.209e-22 Identity = 60/167 (35.93%), Postives = 99/167 (59.28%), Query Frame = 2 Query: 74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNK 571 E +E+PEGV V I+ ++V GP+G++ R+F H + D + ++++F + A + H++N+I GV G+RYK++ +Y+HFPIN + DK I I NFLGEK +R ++ GV V +VK ++I++G D+E V+++AA I VK+K Sbjct: 9 ERVEVPEGVTVSIDGMRVKVSGPKGEVERDFSHARGVLIRLEDNS-----VVVESFFAKARQRALVGAIAGHIRNMIKGVQGGFRYKLKIMYSHFPINVKV-EGDKFI-ISNFLGEKGLRIARIMPGVKV----QVKGSDVIVEGIDVEKVAQTAANIELATKVKDK 164 HSP 2 Score: 22.3274 bits (46), Expect = 4.209e-22 Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 571 DIXKFLDGIYVSEK 612 D KF+DGIY+ E+ Sbjct: 165 DRRKFMDGIYIYER 178 The following BLAST results are available for this feature:
BLAST of EY756141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756141 ID=EY756141; Name=EY756141; organism=Citrus sinensis; type=EST; length=924bpback to top |