EY756141
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_THEGJ (50S ribosomal protein L6P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl6p PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.357e-22 Identity = 63/164 (38.41%), Postives = 97/164 (59.15%), Query Frame = 2 Query: 74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHV 562 E +EIPEGV+V + +++V+GP+G+L R K+ + E GK + + F +K A RT +H+ N+I GVT+G+ YK++ VY+HFP+ + + IE NFLGEK RR ++L GVTV KV+ E+ ++G D E V ++AA I Q + Sbjct: 9 EEVEIPEGVEVTVENNVVKVKGPKGELERELKYPGVKIFT----EDGK--VVVYKEFPRKKDIAIARTFKAHINNMIKGVTEGFTYKLKVVYSHFPVTVKVQGDEVIIE--NFLGEKNPRRAKILPGVTV----KVRGQEITVEGIDKEKVGQTAANIEQATRI 160
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_PYRFU (50S ribosomal protein L6P OS=Pyrococcus furiosus GN=rpl6p PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.268e-21 Identity = 65/164 (39.63%), Postives = 97/164 (59.15%), Query Frame = 2 Query: 74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHV 562 E +EIPEGV+V + ++V+GP+G+L R F + E G + D F RK A RT +H++N+I GVT+G+ YK++ VY+HFPI+ + + IE NFLGEK R+ ++L GVTV KV+ E+I++G D E V ++AA I Q + Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFT----EDGNVVIYKD--FPRRKDVAIARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPISVKVQGDEVIIE--NFLGEKAPRKAKILPGVTV----KVRGQEIIVEGIDKEAVGQTAANIEQATRI 160
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_PYRHO (50S ribosomal protein L6P OS=Pyrococcus horikoshii GN=rpl6p PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 4.817e-21 Identity = 64/164 (39.02%), Postives = 96/164 (58.54%), Query Frame = 2 Query: 74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHV 562 E +EIPEGV+V + ++V+GP+G++ + + + E GK + D F RK A +RT +H+ N+I GVT+G+ YK++ VY+HFPI + + IE NFLGEK RR ++L GVTV KVK E+I++G D E ++AA I Q + Sbjct: 9 EEIEIPEGVEVSVQDYNVKVKGPKGEVEKKLFWPGVKIFV----EDGKVVIYKD--FPRRKDVAIVRTFKAHINNMIKGVTEGFTYKLKVVYSHFPITVKVQGDEVIIE--NFLGEKAPRRAKILPGVTV----KVKGQEIIVEGIDKEATGQTAANIEQATRI 160
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_UNCMA (50S ribosomal protein L6P OS=Uncultured methanogenic archaeon RC-I GN=rpl6p PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.073e-20 Identity = 59/170 (34.71%), Postives = 97/170 (57.06%), Query Frame = 2 Query: 80 MEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDG-----ETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTV-LRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 +E+P+GV V ++ + +G +G++SR F+ + + TDG ETGK ++T A + T SH++N++TGV++GY Y M+ VYAHFPI + DK + I NFLGE+K R ++ V ++ DKV +L G + E + ++AA I Q C ++ + Sbjct: 9 IEVPQGVTVTVSGATLTTKGQKGQISREFRFPGIS--VRTDGGKVIVETGK---------DDKQTKATVGTYASHIKNMMTGVSEGYEYHMKIVYAHFPIQVKVEGKDK-VTIGNFLGERKARTANIVGETKVTVQGDKV----VLTGINKEDLGQTAANIEQACRIRKR 162
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METM7 (50S ribosomal protein L6P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl6p PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.078e-20 Identity = 62/169 (36.69%), Postives = 94/169 (55.62%), Query Frame = 2 Query: 65 LSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 L E +EIPE V V++N + V+ +L R+ + ++ E GK + I+ F + +A + T SH+QN+ITGVT G+ YK+ YAHFP+ S ++ I NFLGEK R +++DGVTV S +E+I+ G + E V ++AA I Q VK + Sbjct: 6 LIREEIEIPENVNVEVNGSTVAVKSGAKELKRDLLYPGIEIST----EDGK--VVIECTFPRKAQTAIVGTYRSHIQNMITGVTDGFEYKLVIRYAHFPMKVSAKG--NTVTIDNFLGEKYTRTAKIMDGVTVKVSG---EEVIVSGANKEFVGQTAANIEQATKVKGR 163
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METM5 (50S ribosomal protein L6P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl6p PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.078e-20 Identity = 63/169 (37.28%), Postives = 94/169 (55.62%), Query Frame = 2 Query: 65 LSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 L E +EIPE V V+IN + V+ +L R+ + ++ E GK + I+ F + +A + T SH+QN+ITGVT G+ YK+ YAHFP+ S ++ I NFLGEK R +++DGVTV S +E+I+ G + E V ++AA I Q VK + Sbjct: 6 LIREEIEIPENVNVEINGNTVAVKSGAKELRRDLMYPGIEIST----EDGK--VVIECTFPRKVQTAIVGTYRSHIQNMITGVTDGFEYKLVIRYAHFPMKVSAKG--NTVTIDNFLGEKYTRTAKIMDGVTVKVSG---EEVIVSGANKEFVGQTAANIEQATKVKGR 163
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METTP (50S ribosomal protein L6P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl6p PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.085e-20 Identity = 55/162 (33.95%), Postives = 95/162 (58.64%), Query Frame = 2 Query: 80 MEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVK 565 ++IP+GV V+I+ + + V+GP+G+LSR + +++ + ++ I + ++ A + T +H++N+I GVT G+ Y+MR VY+HFPI + AD + I NFLGE+K R ++ V V + KDE+++ G D E V ++ A I Q V+ Sbjct: 9 LDIPDGVDVQISGRSVRVKGPKGELSRELWYPDIEI------KREDSKILIRSVARKKQHLAMVGTIAAHIKNMIRGVTDGFEYRMRVVYSHFPIQVKV--ADGKVAISNFLGERKPRFATIVGDVNV---EVGKDEILIRGMDKEAVGQTMANIEQATRVR 159
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METMP (50S ribosomal protein L6P OS=Methanococcus maripaludis GN=rpl6p PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.024e-19 Identity = 61/169 (36.09%), Postives = 93/169 (55.03%), Query Frame = 2 Query: 65 LSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 L E +EIPE V V+IN + V+ +L R + ++ E GK + I+ F + +A + T SH+QN+ITGVT G+ YK+ YAHFP+ S ++ I NFLGEK R +++DGVTV S +++++ G + E V ++AA I Q VK + Sbjct: 6 LIREEIEIPENVNVEINGSTVVVKSGAKELKRELMYPGIEIST----EDGK--VVIECAFPRKAQTAIVGTYRSHIQNMITGVTDGFEYKLVIRYAHFPMKVSAKG--NTVMIDNFLGEKYTRTAKIMDGVTVKVSG---EDVVVSGANKEFVGQTAANIEQATKVKGR 163
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_SULAC (50S ribosomal protein L6P OS=Sulfolobus acidocaldarius GN=rpl6p PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.452e-19 Identity = 46/170 (27.06%), Postives = 100/170 (58.82%), Query Frame = 2 Query: 53 MKTILSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHV 562 +K E ++IP+ VKV + +++V+GP+G++ ++F + + +G ++ ++ F R+ A + + ++H++N+ITG GYRY ++ + HFPI+ ++ + +++ N +GEK +RR ++L GV V ++++++G+DI V+++AA I + Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSYAKGIRIQLNEG-----KIILETTFADRRKKALLYSIIAHIKNMITGTINGYRYYLKVISTHFPISVKVSGDE--VQVSNLIGEKNIRRAKILPGVKVTVKG---EDIVVEGSDIYNVAQTAANIESSTKI 163
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METTH (50S ribosomal protein L6P OS=Methanobacterium thermoautotrophicum GN=rpl6p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19 Identity = 61/170 (35.88%), Postives = 96/170 (56.47%), Query Frame = 2 Query: 65 LSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNK 571 L E + IP+GV V I+ + V+GP+ +LSR F H + + D ++ ++ F +K A I T +H+ N+ITGVT+G+RY+M+ VYAHFP++ +A DK + I NFLGE+ R + V +VK DE+ + G + E V ++ A I Q +K + Sbjct: 6 LIREEIPIPDGVDVTIDGGVT-VKGPKWELSRKFNHSEISMAVEDD------KVVLEVKFPKKKDKAMIGTVRAHISNMITGVTEGFRYRMKIVYAHFPMSVKVA-GDK-VVIENFLGERHPRTARFVGDTKV----QVKGDEVEITGINKEHVGQTMANIEQATKIKGR 162 The following BLAST results are available for this feature:
BLAST of EY756141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756141 ID=EY756141; Name=EY756141; organism=Citrus sinensis; type=EST; length=924bpback to top |