EY756141

Overview
NameEY756141
Unique NameEY756141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METMA (50S ribosomal protein L6P OS=Methanosarcina mazei GN=rpl6p PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19
Identity = 58/165 (35.15%), Postives = 94/165 (56.97%), Query Frame = 2
Query:   71 SETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVK 565
            + T+EIPEGV V ++  +   +GP+G + R F +  +   +  +GE     + +DA    ++  A + T  SH++NLI GV++G+  KM  VYAHFP+   +    K++ I NFLGEKK R  ++L    V  S    +E+++ G + E V ++AA I QK  +K
Sbjct:    6 ARTIEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVR-EGE-----VVVDAESSRKEQKAMVGTFASHLKNLIIGVSEGFECKMNIVYAHFPMQVKVEG--KTLVIGNFLGEKKPRIAKILGETKVKVSG---NEIVVSGINKEDVGQTAANIEQKTKIK 159          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METJA (50S ribosomal protein L6P OS=Methanocaldococcus jannaschii GN=rpl6p PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19
Identity = 59/166 (35.54%), Postives = 92/166 (55.42%), Query Frame = 2
Query:   74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            E ++IPE V+V+IN   + V+    +L R F+H  +      D       + I   +  RK  A + T  +H+ N+I GVT+G+ YK++  YAHFP+  S+   +  IE  NFLGEK  RR  +++GVTV  S    +++I+ G D E V ++AA I Q   +K +
Sbjct:    9 ERVKIPENVQVEINNNEVVVKSGGKELRRRFEHPKIVIKKEGD------EIVIFCEYPRRKDKAMVGTIRAHINNMIKGVTEGFTYKLKIRYAHFPMKVSVKGNEVIIE--NFLGEKHPRRARIMEGVTVKISG---EDVIVTGIDKEKVGQTAANIEQATRIKGR 163          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METHJ (50S ribosomal protein L6P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.691e-19
Identity = 55/165 (33.33%), Postives = 90/165 (54.55%), Query Frame = 2
Query:   80 MEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKV-KDELILDGNDIELVSRSAALINQKCHVKNK 571
            + IP GV V ++  ++ V+GP+G L R+  +  ++  +      G   ++       +  ++ + T  SH  N+ TGVTKGY Y M+ VY+HFPI   +    +++EI NFLGEK  R   +L G TV    KV  DE+ + G D E+V  +AA I +   ++++
Sbjct:    7 VSIPSGVSVTMDGTVLHVKGPKGNLQRDMWYPGIEITI------GSEDVRFTTESQKKAVTSMVGTLASHCSNMCTGVTKGYLYSMKVVYSHFPIQIKVVG--ETLEIVNFLGEKYPRSARILPGTTV----KVGSDEVTVTGIDKEVVGSTAANIERATRIRDR 159          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METS3 (50S ribosomal protein L6P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.004e-18
Identity = 59/166 (35.54%), Postives = 94/166 (56.63%), Query Frame = 2
Query:   74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            E +EIPEGV+V IN   + V+GP G+ SR F + N+D   +T+ E     + ++  F  +K  A I T  +H+ N+ITGVT G+ Y M+ V+AHFP+   + N D  + I NFLGE+  R  +++    V+      DE+ + G + E V ++ A + Q   +K +
Sbjct:    9 EEIEIPEGVEVIINNNEVTVKGPNGEDSRKFTYPNVD---ITEVENN---VVLETSFPRKKDKAMIGTTKAHISNMITGVTDGFEYHMKIVFAHFPMTVKV-NKD-VVVIDNFLGERHPRTAKVVGSAKVVVKG---DEVTITGINKEHVGQTMANLEQATKIKGR 163          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METM6 (50S ribosomal protein L6P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.004e-18
Identity = 61/169 (36.09%), Postives = 92/169 (54.44%), Query Frame = 2
Query:   65 LSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            L  E +EIP  V V+IN   + V+    +L R+  +  ++       E GK  + I+  F  +  +A + T  SH+QN+I GVT G+ YK+   YAHFP+  S      ++ I NFLGEK  R  +++DGVTV  S    +E+I+ G + E V ++AA I Q   VK +
Sbjct:    6 LIREEIEIPANVNVEINGNTVAVKSGAKELKRDLLYPGIEIST----EDGK--VVIECTFPRKAQTAIVGTYRSHIQNMIKGVTDGFEYKLVIRYAHFPMKVSAKG--NTVMIDNFLGEKYTRTAKIMDGVTVKVSG---EEVIVSGANKEFVGQTAANIEQATKVKGR 163          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METAC (50S ribosomal protein L6P OS=Methanosarcina acetivorans GN=rpl6p PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.220e-17
Identity = 55/165 (33.33%), Postives = 91/165 (55.15%), Query Frame = 2
Query:   71 SETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVK 565
            + T+EIPEGV V +   +    GP+G + R   +  +    M D + G+  + +DA +  ++  A + T  SH++NL+ GV +G+  KM  VYAHFP+   +    K++ I NFLGEKK R  +++    V  S    +++ + G + E V ++AA I QK  +K
Sbjct:    6 ARTIEIPEGVSVSLAQDVFTATGPKGTVERKLWYPGI----MIDVKDGE--VVVDAEYARKEQKAMVGTFASHIRNLVKGVNEGFECKMSIVYAHFPMQVKVDG--KTLIIGNFLGEKKPRFAKIIGETKVKVSG---NDVTITGINKEDVGQTAANIEQKTKIK 159          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METST (50S ribosomal protein L6P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.199e-17
Identity = 55/167 (32.93%), Postives = 88/167 (52.69%), Query Frame = 2
Query:   71 SETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            +E + IPE V V IN   + V+G  G++ RNF H  +           +  + +   F ++K  A + T  SH+ N+I GV  G+ YKM+ VYAHFP+   +    K + I NFLGE+  R+ +++ G  V  S K +D + + G + E V ++ A I Q   +K +
Sbjct:    8 TEIIPIPEDVTVTINGSEVTVKGNGGEIKRNFNHNKITI------SNDEENVTVKVAFPNKKDKAMVGTIRSHISNMIYGVDHGFTYKMKIVYAHFPMTVKVQG--KIVTIDNFLGERSPRKAKII-GDDVKVSVKGED-VTITGINKEHVGQTMANIEQATKIKGR 164          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METVS (50S ribosomal protein L6P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl6p PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.604e-16
Identity = 54/170 (31.76%), Postives = 92/170 (54.12%), Query Frame = 2
Query:   65 LSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNK 571
            L  E +EIP  V V++N   + V+     L R      ++  +  +      ++ +++ F  +  +A + T  SH+QN+I GV++G+ YK+   YAHFP+  +      ++ I NFLGEK  R  ++++GVTV    KV  +E+I+ G + E V ++AA I Q   VK +
Sbjct:    6 LIREEIEIPGNVSVEVNGSEVVVKSGAKVLKRELAFPGIEIKMENE------KVVVESTFPKKNQTAMVGTYRSHIQNMIKGVSEGFEYKLVIRYAHFPMKVTFKG--NTVIIDNFLGEKYPRTAKVMEGVTV----KVNGEEVIVSGTNKEFVGQTAANIEQATKVKGR 163          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METVA (50S ribosomal protein L6P OS=Methanococcus vannielii GN=rpl6p PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.604e-16
Identity = 54/170 (31.76%), Postives = 92/170 (54.12%), Query Frame = 2
Query:   65 LSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNK 571
            L  E +EIP  V V++N   + V+     L R      ++  +  +      ++ +++ F  +  +A + T  SH+QN+I GV++G+ YK+   YAHFP+  +      ++ I NFLGEK  R  ++++GVTV    KV  +E+I+ G + E V ++AA I Q   VK +
Sbjct:    6 LIREEIEIPGNVSVEVNGSEVVVKSGAKVLKRELAFPGIEIKMENE------KVVVESTFPKKNQTAMVGTYRSHIQNMIKGVSEGFEYKLVIRYAHFPMKVTFKG--NTVIIDNFLGEKYPRTAKVMEGVTV----KVNGEEVIVSGTNKEFVGQTAANIEQATKVKGR 163          
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_HALMA (50S ribosomal protein L6P OS=Haloarcula marismortui GN=rpl6p PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.666e-16
Identity = 57/164 (34.76%), Postives = 91/164 (55.49%), Query Frame = 2
Query:   80 MEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571
            +EIPE V  + +   I VEG  G ++R   + ++D  +  DG+T    + I++   + KT + I T  SH++N+  GVT+G+ Y M   Y+HFP+  ++   +  + I NFLGEK  RR   + G T +  D   +EL + G DIE V ++AA I Q   + +K
Sbjct:    6 LEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDID--VSVDGDT----VVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDE--VVIENFLGEKAPRRT-TIHGDTDVEID--GEELTVSGPDIEAVGQTAADIEQLTRINDK 158          
The following BLAST results are available for this feature:
BLAST of EY756141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
RL6_METMA4.509e-1935.1550S ribosomal protein L6P OS=Methanosarcina mazei ... [more]
RL6_METJA4.509e-1935.5450S ribosomal protein L6P OS=Methanocaldococcus ja... [more]
RL6_METHJ7.691e-1933.3350S ribosomal protein L6P OS=Methanospirillum hung... [more]
RL6_METS31.004e-1835.5450S ribosomal protein L6P OS=Methanobrevibacter sm... [more]
RL6_METM61.004e-1836.0950S ribosomal protein L6P OS=Methanococcus maripal... [more]
RL6_METAC4.220e-1733.3350S ribosomal protein L6P OS=Methanosarcina acetiv... [more]
RL6_METST7.199e-1732.9350S ribosomal protein L6P OS=Methanosphaera stadtm... [more]
RL6_METVS1.604e-1631.7650S ribosomal protein L6P OS=Methanococcus vanniel... [more]
RL6_METVA1.604e-1631.7650S ribosomal protein L6P OS=Methanococcus vanniel... [more]
RL6_HALMA4.666e-1634.7650S ribosomal protein L6P OS=Haloarcula marismortu... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-B02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756141 ID=EY756141; Name=EY756141; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGGGAAGGAGCTGAGACGCAGCAGAGGCAGAGCAGCTTTCA
TCATGAAGACAATACTTTCTTCAGAGACGATGGAGATCCCAGAGGGGGTG
AAAGTAAAGATAAATGCGAAGATAATAGAAGTAGAAGGACCTAGAGGTAA
GCTTAGCCGCAATTTCAAGCATTTGAACCTAGACTTCCATCTCATGACTG
ATGGGGAAACTGGGAAGCGGAGGCTGAAGATCGACGCATGGTTTGGGTCT
CGCAAGACCAGTGCCGCCATCAGAACTGCCCTCAGCCATGTACAGAACCT
CATCACTGGGGTTACCAAGGGCTACCGTTACAAGATGAGATTCGTCTACG
CTCACTTTCCCATCAACGCCTCCATCGCCAACGCTGACAAGTCCATTGAG
ATCCGTAACTTTCTTGGAGAAAAGAAGGTTCGAAGAGTGGAAATGCTTGA
CGGTGTTACCGTTCTTCGGTCTGACAAGGTTAAGGATGAACTCATTCTTG
ATGGGAATGACATTGAACTTGTGTCGCGGTCCGCTGCTTTGATCAATCAG
AAATGCCATGTGAAGAATAAGATATCANGAAATTCTTAGACGGGATCTAT
GTCAGTGAGAAGGGGCACATTGTTGGAGAGGATTANGTAGCTTTCAAATT
TTATGTCACATTATTATCATGAAATTGGTATCAATCTTTGCTCTTTTGCC
CTGNGNTGGGGGAAGTCCTTTATTTTTTTTCGTTGGGATTTTGGTATTAG
AGAGTTTTGATTTCTGCTTCACTCATGTACCTTTGTTCCATATGGATCCA
ATGGATTTATACCTAAAAAAAAAAAAAAAAAAAAAAAGGGCGGGCGCTCA
AAGGATCCAACTTACGTAACCGGGATGCAACGCATAACTCTTCATAAGGG
CCCCAAAATCATTCCCTTGCCGCC
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