EY756141
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METMA (50S ribosomal protein L6P OS=Methanosarcina mazei GN=rpl6p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19 Identity = 58/165 (35.15%), Postives = 94/165 (56.97%), Query Frame = 2 Query: 71 SETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVK 565 + T+EIPEGV V ++ + +GP+G + R F + + + +GE + +DA ++ A + T SH++NLI GV++G+ KM VYAHFP+ + K++ I NFLGEKK R ++L V S +E+++ G + E V ++AA I QK +K Sbjct: 6 ARTIEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVR-EGE-----VVVDAESSRKEQKAMVGTFASHLKNLIIGVSEGFECKMNIVYAHFPMQVKVEG--KTLVIGNFLGEKKPRIAKILGETKVKVSG---NEIVVSGINKEDVGQTAANIEQKTKIK 159
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METJA (50S ribosomal protein L6P OS=Methanocaldococcus jannaschii GN=rpl6p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19 Identity = 59/166 (35.54%), Postives = 92/166 (55.42%), Query Frame = 2 Query: 74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 E ++IPE V+V+IN + V+ +L R F+H + D + I + RK A + T +H+ N+I GVT+G+ YK++ YAHFP+ S+ + IE NFLGEK RR +++GVTV S +++I+ G D E V ++AA I Q +K + Sbjct: 9 ERVKIPENVQVEINNNEVVVKSGGKELRRRFEHPKIVIKKEGD------EIVIFCEYPRRKDKAMVGTIRAHINNMIKGVTEGFTYKLKIRYAHFPMKVSVKGNEVIIE--NFLGEKHPRRARIMEGVTVKISG---EDVIVTGIDKEKVGQTAANIEQATRIKGR 163
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METHJ (50S ribosomal protein L6P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl6p PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.691e-19 Identity = 55/165 (33.33%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 80 MEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKV-KDELILDGNDIELVSRSAALINQKCHVKNK 571 + IP GV V ++ ++ V+GP+G L R+ + ++ + G ++ + ++ + T SH N+ TGVTKGY Y M+ VY+HFPI + +++EI NFLGEK R +L G TV KV DE+ + G D E+V +AA I + ++++ Sbjct: 7 VSIPSGVSVTMDGTVLHVKGPKGNLQRDMWYPGIEITI------GSEDVRFTTESQKKAVTSMVGTLASHCSNMCTGVTKGYLYSMKVVYSHFPIQIKVVG--ETLEIVNFLGEKYPRSARILPGTTV----KVGSDEVTVTGIDKEVVGSTAANIERATRIRDR 159
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METS3 (50S ribosomal protein L6P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl6p PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.004e-18 Identity = 59/166 (35.54%), Postives = 94/166 (56.63%), Query Frame = 2 Query: 74 ETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 E +EIPEGV+V IN + V+GP G+ SR F + N+D +T+ E + ++ F +K A I T +H+ N+ITGVT G+ Y M+ V+AHFP+ + N D + I NFLGE+ R +++ V+ DE+ + G + E V ++ A + Q +K + Sbjct: 9 EEIEIPEGVEVIINNNEVTVKGPNGEDSRKFTYPNVD---ITEVENN---VVLETSFPRKKDKAMIGTTKAHISNMITGVTDGFEYHMKIVFAHFPMTVKV-NKD-VVVIDNFLGERHPRTAKVVGSAKVVVKG---DEVTITGINKEHVGQTMANLEQATKIKGR 163
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METM6 (50S ribosomal protein L6P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl6p PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.004e-18 Identity = 61/169 (36.09%), Postives = 92/169 (54.44%), Query Frame = 2 Query: 65 LSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 L E +EIP V V+IN + V+ +L R+ + ++ E GK + I+ F + +A + T SH+QN+I GVT G+ YK+ YAHFP+ S ++ I NFLGEK R +++DGVTV S +E+I+ G + E V ++AA I Q VK + Sbjct: 6 LIREEIEIPANVNVEINGNTVAVKSGAKELKRDLLYPGIEIST----EDGK--VVIECTFPRKAQTAIVGTYRSHIQNMIKGVTDGFEYKLVIRYAHFPMKVSAKG--NTVMIDNFLGEKYTRTAKIMDGVTVKVSG---EEVIVSGANKEFVGQTAANIEQATKVKGR 163
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METAC (50S ribosomal protein L6P OS=Methanosarcina acetivorans GN=rpl6p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.220e-17 Identity = 55/165 (33.33%), Postives = 91/165 (55.15%), Query Frame = 2 Query: 71 SETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVK 565 + T+EIPEGV V + + GP+G + R + + M D + G+ + +DA + ++ A + T SH++NL+ GV +G+ KM VYAHFP+ + K++ I NFLGEKK R +++ V S +++ + G + E V ++AA I QK +K Sbjct: 6 ARTIEIPEGVSVSLAQDVFTATGPKGTVERKLWYPGI----MIDVKDGE--VVVDAEYARKEQKAMVGTFASHIRNLVKGVNEGFECKMSIVYAHFPMQVKVDG--KTLIIGNFLGEKKPRFAKIIGETKVKVSG---NDVTITGINKEDVGQTAANIEQKTKIK 159
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METST (50S ribosomal protein L6P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl6p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.199e-17 Identity = 55/167 (32.93%), Postives = 88/167 (52.69%), Query Frame = 2 Query: 71 SETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 +E + IPE V V IN + V+G G++ RNF H + + + + F ++K A + T SH+ N+I GV G+ YKM+ VYAHFP+ + K + I NFLGE+ R+ +++ G V S K +D + + G + E V ++ A I Q +K + Sbjct: 8 TEIIPIPEDVTVTINGSEVTVKGNGGEIKRNFNHNKITI------SNDEENVTVKVAFPNKKDKAMVGTIRSHISNMIYGVDHGFTYKMKIVYAHFPMTVKVQG--KIVTIDNFLGERSPRKAKII-GDDVKVSVKGED-VTITGINKEHVGQTMANIEQATKIKGR 164
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METVS (50S ribosomal protein L6P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl6p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.604e-16 Identity = 54/170 (31.76%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 65 LSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNK 571 L E +EIP V V++N + V+ L R ++ + + ++ +++ F + +A + T SH+QN+I GV++G+ YK+ YAHFP+ + ++ I NFLGEK R ++++GVTV KV +E+I+ G + E V ++AA I Q VK + Sbjct: 6 LIREEIEIPGNVSVEVNGSEVVVKSGAKVLKRELAFPGIEIKMENE------KVVVESTFPKKNQTAMVGTYRSHIQNMIKGVSEGFEYKLVIRYAHFPMKVTFKG--NTVIIDNFLGEKYPRTAKVMEGVTV----KVNGEEVIVSGTNKEFVGQTAANIEQATKVKGR 163
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METVA (50S ribosomal protein L6P OS=Methanococcus vannielii GN=rpl6p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.604e-16 Identity = 54/170 (31.76%), Postives = 92/170 (54.12%), Query Frame = 2 Query: 65 LSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNK 571 L E +EIP V V++N + V+ L R ++ + + ++ +++ F + +A + T SH+QN+I GV++G+ YK+ YAHFP+ + ++ I NFLGEK R ++++GVTV KV +E+I+ G + E V ++AA I Q VK + Sbjct: 6 LIREEIEIPGNVSVEVNGSEVVVKSGAKVLKRELAFPGIEIKMENE------KVVVESTFPKKNQTAMVGTYRSHIQNMIKGVSEGFEYKLVIRYAHFPMKVTFKG--NTVIIDNFLGEKYPRTAKVMEGVTV----KVNGEEVIVSGTNKEFVGQTAANIEQATKVKGR 163
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_HALMA (50S ribosomal protein L6P OS=Haloarcula marismortui GN=rpl6p PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 4.666e-16 Identity = 57/164 (34.76%), Postives = 91/164 (55.49%), Query Frame = 2 Query: 80 MEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 +EIPE V + + I VEG G ++R + ++D + DG+T + I++ + KT + I T SH++N+ GVT+G+ Y M Y+HFP+ ++ + + I NFLGEK RR + G T + D +EL + G DIE V ++AA I Q + +K Sbjct: 6 LEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDID--VSVDGDT----VVIESDEDNAKTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQVNVEGDE--VVIENFLGEKAPRRT-TIHGDTDVEID--GEELTVSGPDIEAVGQTAADIEQLTRINDK 158 The following BLAST results are available for this feature:
BLAST of EY756141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756141 ID=EY756141; Name=EY756141; organism=Citrus sinensis; type=EST; length=924bpback to top |