EY756141
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_PYRAE (50S ribosomal protein L6P OS=Pyrobaculum aerophilum GN=rpl6p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.094e-16 Identity = 58/195 (29.74%), Postives = 103/195 (52.82%), Query Frame = 2 Query: 53 MKTILSSETMEIPEGVKVKINAK-----IIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALIN--QKCHVKNKISXNS*TGSMSVRRG 616 M+ + S E +EIP+GV V I I++V+GP G++++ FK+ + L DG ++ ++ + ++ A + T ++N+ GVT+G+RYK++ +Y HFP+ + + I NFLG K + + GV V K K++++++G D ELVS AA + + H + S + G + V G Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQ-DG-----KIVMEVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPMLVKVQG--NQLVIENFLGRKSKITLNIPKGVKV--EVKGKEDIVIEGIDRELVSTFAAAVQAATELHGDERPSPHGREGGLGVVDG 185
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METBU (50S ribosomal protein L6P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl6p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 6.094e-16 Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 80 MEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVK 565 + IPEGV V ++ GP+G +R + ++ E + +D+ +K A + T SH+ N++ GV G+ Y M+ VY+HFP+ + K I NFLGEKK R +L +V S DE+I+ G + E V ++AA I QK +K Sbjct: 9 ISIPEGVTVTFEKNVLSASGPKGTNTRFLWYPGVNI------EVNGSEIIVDSASSRKKQKAMVGTYTSHITNMMKGVVDGFEYHMKVVYSHFPMQIKVNG--KKFVINNFLGEKKPRVSNILGETSVKASG---DEVIVSGINKEDVGQTAANIEQKTKIK 159
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_HALWD (50S ribosomal protein L6P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl6p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.959e-16 Identity = 57/170 (33.53%), Postives = 88/170 (51.76%), Query Frame = 2 Query: 65 LSSETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELI-LDGNDIELVSRSAALINQKCHVKNK 571 ++ +EIPE V +++ + VEGP G ++R + ++ + D + ++ D KTSA + T SHV N+I GVT G+ Y+M YAHFP+ S+ + IE NFLGEK RR + V ++ E++ L G E V ++AA I Q V +K Sbjct: 1 MTRTAIEIPENVSAEVSNLALTVEGPNGSVTRTLWYPSVTVSVDEDADADAVVIETDET--DAKTSATVGTFESHVSNMIHGVTDGWSYEMEVYYAHFPMQVSVEGDEVIIE--NFLGEKASRRTPIRGDTNV----QIDGEMVTLTGPSKEDVGQTAADIEQLTRVTDK 162
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_ARCFU (50S ribosomal protein L6P OS=Archaeoglobus fulgidus GN=rpl6p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.959e-16 Identity = 56/192 (29.17%), Postives = 97/192 (50.52%), Query Frame = 2 Query: 20 LRRSRGRAAFIMKT---ILSSETMEIPEGVKVKINAK-----IIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 +R +RG F + T + +E+PE V++ I ++ GP+G+ +R K+ + E G ++++ +K A + T H++NLITGV +G+ Y ++ VYAHFPI + + IE NF+GEK RR +++ V S + ++ + G DIE ++AA + Q +K K Sbjct: 1 MRENRGWEVFSLLTSTEVYEERVVEVPEDVQLTIEGDSFRGYTLKAVGPKGENTRYLKYRGVFI------EVGDGKVRVYTTSPKKKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIKVRVEGNEVIIE--NFIGEKHPRRAKIVGRAQVEISGQ---DIYVRGIDIEECGQTAANLEQATKIKRK 181
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_HALSA (50S ribosomal protein L6P OS=Halobacterium salinarium GN=rpl6p PE=1 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 1.358e-15 Identity = 51/164 (31.10%), Postives = 87/164 (53.05%), Query Frame = 2 Query: 80 MEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 +EIP+ V +++ + VEGP G ++R + ++D + D + + + KT + + T SHV N+ GV++G+ YK+ Y+HFP+ + + + I+NFLGEK RR ++ V+ D +E+ L G IE V ++AA I Q V +K Sbjct: 6 IEIPDDVTAEVDHLDLTVEGPEGSVTRRLWYPDVDVSVEDDA------VVVASEVDDAKTDSTVGTFESHVANMFHGVSEGWEYKLEVHYSHFPMQVDVEG--EEVVIQNFLGEKAARRTQIRGDTDVVVDD---EEVTLSGPSIEDVGQTAADIEQLTRVTDK 158
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_META3 (50S ribosomal protein L6P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl6p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.316e-15 Identity = 53/167 (31.74%), Postives = 94/167 (56.29%), Query Frame = 2 Query: 74 ETMEIPEGVKVK-INAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 E +EIPE V ++ IN + + V+ +L R + ++ + ++ +++ + +K +A I T SH++N+ITGV++G+ YKM+ YAHFP+ S+ + I NFLGEK R+ +++GV V S +++I+ G D E ++AA I Q V+ + Sbjct: 9 EEIEIPESVTIEVINNEEVVVKAGGKELRRILSYPDVVI------KKEDNKVVVESLYPRKKQAAIIGTFASHIKNIITGVSEGFEYKMKIRYAHFPMKISVKG--NEVIIDNFLGEKHPRKATIMEGVKVKVSG---EDVIVTGIDKEKTGQTAANIEQATRVRGR 164
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_NANEQ (50S ribosomal protein L6P OS=Nanoarchaeum equitans GN=rpl6p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.159e-15 Identity = 46/165 (27.88%), Postives = 85/165 (51.52%), Query Frame = 2 Query: 86 IPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKK--VRRVEMLDGVTV-LRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 IPE VKV I++V GP+G++ R F +H + ++ ++ +F +R+ I T SH++N++ GV + Y+++ Y HFP+ + + + NFLGEK ++ + LD V V + +K + E++++ D E A++I Q +K Sbjct: 12 IPENVKVSYENNILKVSGPKGEVERKF------YHPLIKLSVNDNKIILETYFATRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMRVKLEG--NKLIVENFLGEKAPIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQSTRFLHK 168
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METBF (50S ribosomal protein L6P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl6p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.800e-15 Identity = 54/163 (33.13%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 80 MEIPEGVKVKINAK-IIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVK 565 +EIPEG+ V + + GP G + R + + ++ DGE +++DA ++ A + T SH++NL+ GV +G+ KM +YAHFP+ + K++ I NFLGEKK R ++L V S +E+ + G + E V ++AA I QK +K Sbjct: 9 IEIPEGISVSFSQDDVFTATGPLGTVERKLWYPGIKIYVR-DGE-----VEVDAESSRKEQKAMVGTFTSHIKNLMKGVNEGFECKMTILYAHFPMQVKVDG--KTLIIGNFLGEKKPRIAKILGETKVKVSG---NEVTVSGINKEDVGQTAANIEQKTKIK 160
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_NATPD (50S ribosomal protein L6P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl6p PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.501e-14 Identity = 55/164 (33.54%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 80 MEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 +EIP+ V ++ + VEGP G ++R + ++ D E G ++ D + KT + + T SHV N+ GVT+G+ Y M Y+HFP+ S+ D I I NFLGEK R+ + +V + +EL + G IE V ++AA I Q V +K Sbjct: 5 IEIPDEVTATMDHLEVTVEGPNGSVTRRLWYPDIT----VDVEDGAVVIETDD--DNAKTRSTVGTFESHVTNMFHGVTEGWEYSMEVFYSHFPMQVSVEGGD--IVIENFLGEKAPRKTPVRGDTSV---EVDGEELTVSGPSIEDVGQTAADIEQLTRVSDK 157
BLAST of EY756141 vs. ExPASy Swiss-Prot
Match: RL6_METKA (50S ribosomal protein L6P OS=Methanopyrus kandleri GN=rpl6p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.236e-13 Identity = 46/175 (26.29%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 62 ILSSETMEIPEGVKVKINAKI-----IEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALINQKCHVKNK 571 I+ E ++I + V+++I+ + + V+GP+G++++ F + D +L + + + I A +R+ A + ++++N+ GVT+G+ YK++ VY+HFP + + + I NF+GE R E++D + +D +I+ G D E V ++AA + Q ++K++ Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYP--DVYLWVEDD----EVVIAATRSNRRQKAILGMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTEVIVQGQD-IIVRGIDKEAVGQTAANLEQATYIKDR 184 The following BLAST results are available for this feature:
BLAST of EY756141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756141 ID=EY756141; Name=EY756141; organism=Citrus sinensis; type=EST; length=924bpback to top |