EY756137

Overview
NameEY756137
Unique NameEY756137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length380
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5318 contig Csv1_Contig5318:404..783. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756137 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.821e-16
Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 2
Query:   11 VFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 223
            +++G CGT  +HAVTAVGYG +       Y+++KNSWGP WGE GYIRIKR +G   G C +   + FPIK
Sbjct:  148 IYEGPCGTNTDHAVTAVGYGKT-------YLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211          
BLAST of EY756137 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.334e-15
Identity = 38/71 (53.52%), Postives = 47/71 (66.20%), Query Frame = 2
Query:   11 VFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 223
            +F+G CGT  +HAVTAVGYG S       YI++KNSWG  WGE GYIRIKR  G   G+C + K + +P K
Sbjct:  280 IFEGPCGTKVDHAVTAVGYGKSGGK---GYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 347          
BLAST of EY756137 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.334e-15
Identity = 38/71 (53.52%), Postives = 48/71 (67.61%), Query Frame = 2
Query:   11 VFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 223
            VF G C T  NH V  VGYG++   +  +Y IV+NSWGP+WGE GYIR++RN     GLC I  +AS+PIK
Sbjct:  277 VFTGDCNTDLNHGVAIVGYGTTV--DGTNYWIVRNSWGPEWGEQGYIRMQRNISKKEGLCGIAMMASYPIK 345          
BLAST of EY756137 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.972e-15
Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 2
Query:    5 ASVFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 223
            + VF G CGT  +H V AVGYG+ ++  A  Y  V+NSWGP WGE GYIR++RN     G C I  +AS+PIK
Sbjct:  304 SGVFTGRCGTNLDHGVVAVGYGTDAATGAA-YWTVRNSWGPDWGENGYIRMERNVTARTGKCGIAMMASYPIK 375          
BLAST of EY756137 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.972e-15
Identity = 38/71 (53.52%), Postives = 47/71 (66.20%), Query Frame = 2
Query:   11 VFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 223
            VF G C T  NH V  VGYG++   +  +Y IV+NSWGP+WGE GYIR++RN     GLC I  L S+PIK
Sbjct:  277 VFTGDCSTDLNHGVAIVGYGTTV--DGTNYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGIAMLPSYPIK 345          
BLAST of EY756137 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.069e-15
Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 2
Query:    5 ASVFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 223
            + +FDGSCGT  +H V AVGYG+ +     DY IV+NSWG  WGE GY+R+ RN     G C I    S+PIK
Sbjct:  284 SGIFDGSCGTQLDHGVVAVGYGTENGK---DYWIVRNSWGKSWGESGYLRMARNIASSSGKCGIAIEPSYPIK 353          
BLAST of EY756137 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.647e-15
Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 2
Query:    5 ASVFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 223
            + VFDG+CGT  NH V  VGYG+ +     DY IVKNS G  WGE GY+++ RN   P GLC I   AS+P+K
Sbjct:  291 SGVFDGTCGTNLNHGVVVVGYGTENGR---DYWIVKNSRGDTWGEAGYMKMARNIANPRGLCGIAMRASYPLK 360          
BLAST of EY756137 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.129e-14
Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 2
Query:    5 ASVFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 223
            + VFDGSCGT  NH V  VGYG+ +     DY +VKNS G  WGE GY+++ RN   P GLC I   AS+P+K
Sbjct:  284 SGVFDGSCGTNLNHGVVVVGYGTENGR---DYWLVKNSRGITWGEAGYMKMARNIANPRGLCGIAMRASYPLK 353          
BLAST of EY756137 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 77.7962 bits (190), Expect = 1.926e-14
Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 2
Query:    5 ASVFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIKF 226
            + +F G CGT  +HAVT VGYG+      +DY IVKNSW   WGE GY+RI RN G   G C I  + S+P+K+
Sbjct:  275 SGIFTGPCGTAVDHAVTIVGYGTEGG---IDYWIVKNSWDTTWGEEGYMRILRNVG-GAGTCGIATMPSYPVKY 344          
BLAST of EY756137 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.516e-14
Identity = 38/71 (53.52%), Postives = 46/71 (64.79%), Query Frame = 2
Query:   11 VFDGSCGTYPNHAVTAVGYGSSSSPEAVDYIIVKNSWGPKWGEGGYIRIKRNTGLPGGLCAINKLASFPIK 223
            VF GSCGT  +H V  VGYG++   +   Y  VKNSWGP+WGE GYIR++R      GLC I   AS+PIK
Sbjct:  275 VFTGSCGTELDHGVAIVGYGTTI--DGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK 343          
The following BLAST results are available for this feature:
BLAST of EY756137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
MEX1_JACME7.821e-1652.11Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
PAPA3_CARPA1.334e-1553.52Caricain OS=Carica papaya PE=1 SV=2[more]
CYSEP_VIGMU1.334e-1553.52Vignain OS=Vigna mungo PE=1 SV=1[more]
CYSP1_ORYSJ2.972e-1552.05Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CYSEP_PHAVU2.972e-1553.52Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
RD21A_ARATH5.069e-1550.68Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CPR4_ARATH8.647e-1552.05Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPR3_ARATH1.129e-1452.05Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
ACTN_ACTCH1.926e-1450.00Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CYSEP_RICCO2.516e-1453.52Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-A10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756137 ID=EY756137; Name=EY756137; organism=Citrus sinensis; type=EST; length=380bp
CCACGCGTCCGTATTCGACGGCTCCTGTGGAACATATCCCAATCACGCAG
TGACAGCAGTTGGGTATGGATCTTCTTCTTCACCGGAGGCAGTGGATTAC
ATAATTGTCAAAAATTCATGGGGACCCAAATGGGGAGAGGGAGGCTACAT
CAGGATTAAGAGAAACACCGGATTACCTGGTGGCCTATGTGCTATCAACA
AGTTGGCTTCATTCCCCATCAAGTTCAAGACCACTTAACTGTGTGTACTA
TGTTTGCCTTCAGTTATGACTAAAAATAATATCTTGTGCTTCAATGAATT
GGATGAATGTCCTTCGTTTCGAGGTTTTGCTATATCATTAACTCCAGCTC
GTCATAGACTAAAAAAAAAAAAAAAAAAAA
back to top