EY756133

Overview
NameEY756133
Unique NameEY756133
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756133 vs. ExPASy Swiss-Prot
Match: H2A2A_MOUSE (Histone H2A type 2-A OS=Mus musculus GN=Hist2h2aa1 PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30
Identity = 67/106 (63.21%), Postives = 77/106 (72.64%), Query Frame = 1 
Query:  139 SRSVKAGLQFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTK 456
            SRS +AGLQFPVGR+ R L+KG Y++RVG+GAP                  GNAARDNKK +IIPRH+QLA+RNDEEL KLL  VTIA GGVLPNI  VLLPKKT+
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
[Close]
BLAST of EY756133 vs. ExPASy Swiss-Prot
Match: H2A2A_HUMAN (Histone H2A type 2-A OS=Homo sapiens GN=HIST2H2AA3 PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30
Identity = 67/106 (63.21%), Postives = 77/106 (72.64%), Query Frame = 1 
Query:  139 SRSVKAGLQFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTK 456
            SRS +AGLQFPVGR+ R L+KG Y++RVG+GAP                  GNAARDNKK +IIPRH+QLA+RNDEEL KLL  VTIA GGVLPNI  VLLPKKT+
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
[Close]
BLAST of EY756133 vs. ExPASy Swiss-Prot
Match: H2A1_RAT (Histone H2A type 1 OS=Rattus norvegicus PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30
Identity = 67/106 (63.21%), Postives = 77/106 (72.64%), Query Frame = 1 
Query:  139 SRSVKAGLQFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTK 456
            SRS +AGLQFPVGR+ R L+KG Y++RVG+GAP                  GNAARDNKK +IIPRH+QLA+RNDEEL KLL  VTIA GGVLPNI  VLLPKKT+
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
[Close]
BLAST of EY756133 vs. ExPASy Swiss-Prot
Match: H2A1_MOUSE (Histone H2A type 1 OS=Mus musculus GN=Hist1h2ab PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30
Identity = 67/106 (63.21%), Postives = 77/106 (72.64%), Query Frame = 1 
Query:  139 SRSVKAGLQFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTK 456
            +RS +AGLQFPVGR+ R L+KG YS+RVG+GAP                  GNAARDNKK +IIPRH+QLA+RNDEEL KLL  VTIA GGVLPNI  VLLPKKT+
Sbjct:   17 TRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTE 122
[Close]
BLAST of EY756133 vs. ExPASy Swiss-Prot
Match: H2A1K_MOUSE (Histone H2A type 1-K OS=Mus musculus GN=Hist1h2ak PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30
Identity = 67/106 (63.21%), Postives = 77/106 (72.64%), Query Frame = 1 
Query:  139 SRSVKAGLQFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTK 456
            +RS +AGLQFPVGR+ R L+KG YS+RVG+GAP                  GNAARDNKK +IIPRH+QLA+RNDEEL KLL  VTIA GGVLPNI  VLLPKKT+
Sbjct:   17 TRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTE 122
[Close]
BLAST of EY756133 vs. ExPASy Swiss-Prot
Match: H2A1H_MOUSE (Histone H2A type 1-H OS=Mus musculus GN=Hist1h2ah PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30
Identity = 67/106 (63.21%), Postives = 77/106 (72.64%), Query Frame = 1 
Query:  139 SRSVKAGLQFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTK 456
            +RS +AGLQFPVGR+ R L+KG YS+RVG+GAP                  GNAARDNKK +IIPRH+QLA+RNDEEL KLL  VTIA GGVLPNI  VLLPKKT+
Sbjct:   17 TRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTE 122
[Close]
BLAST of EY756133 vs. ExPASy Swiss-Prot
Match: H2A1F_MOUSE (Histone H2A type 1-F OS=Mus musculus GN=Hist1h2af PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30
Identity = 67/106 (63.21%), Postives = 77/106 (72.64%), Query Frame = 1 
Query:  139 SRSVKAGLQFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTK 456
            +RS +AGLQFPVGR+ R L+KG YS+RVG+GAP                  GNAARDNKK +IIPRH+QLA+RNDEEL KLL  VTIA GGVLPNI  VLLPKKT+
Sbjct:   17 TRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTE 122
[Close]
BLAST of EY756133 vs. ExPASy Swiss-Prot
Match: H2A1D_HUMAN (Histone H2A type 1-D OS=Homo sapiens GN=HIST1H2AD PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30
Identity = 67/106 (63.21%), Postives = 77/106 (72.64%), Query Frame = 1 
Query:  139 SRSVKAGLQFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTK 456
            +RS +AGLQFPVGR+ R L+KG YS+RVG+GAP                  GNAARDNKK +IIPRH+QLA+RNDEEL KLL  VTIA GGVLPNI  VLLPKKT+
Sbjct:   17 TRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTE 122
[Close]
BLAST of EY756133 vs. ExPASy Swiss-Prot
Match: H2A1C_RAT (Histone H2A type 1-C OS=Rattus norvegicus PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30
Identity = 67/106 (63.21%), Postives = 77/106 (72.64%), Query Frame = 1 
Query:  139 SRSVKAGLQFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTK 456
            SRS +AGLQFPVGR+ R L+KG Y++RVG+GAP                  GNAARDNKK +IIPRH+QLA+RNDEEL KLL  VTIA GGVLPNI  VLLPKKT+
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTE 122
[Close]
BLAST of EY756133 vs. ExPASy Swiss-Prot
Match: H2A1C_HUMAN (Histone H2A type 1-C OS=Homo sapiens GN=HIST1H2AC PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 6.898e-30
Identity = 67/106 (63.21%), Postives = 77/106 (72.64%), Query Frame = 1 
Query:  139 SRSVKAGLQFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTK 456
            SRS +AGLQFPVGR+ R L+KG Y++RVG+GAP                  GNAARDNKK +IIPRH+QLA+RNDEEL KLL  VTIA GGVLPNI  VLLPKKT+
Sbjct:   17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTE 122
The following BLAST results are available for this feature:
BLAST of EY756133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 238
Match NameE-valueIdentityDescription
H2A2A_MOUSE6.898e-3063.21Histone H2A type 2-A OS=Mus musculus GN=Hist2h2aa1... [more]
H2A2A_HUMAN6.898e-3063.21Histone H2A type 2-A OS=Homo sapiens GN=HIST2H2AA3... [more]
H2A1_RAT6.898e-3063.21Histone H2A type 1 OS=Rattus norvegicus PE=1 SV=2[more]
H2A1_MOUSE6.898e-3063.21Histone H2A type 1 OS=Mus musculus GN=Hist1h2ab PE... [more]
H2A1K_MOUSE6.898e-3063.21Histone H2A type 1-K OS=Mus musculus GN=Hist1h2ak ... [more]
H2A1H_MOUSE6.898e-3063.21Histone H2A type 1-H OS=Mus musculus GN=Hist1h2ah ... [more]
H2A1F_MOUSE6.898e-3063.21Histone H2A type 1-F OS=Mus musculus GN=Hist1h2af ... [more]
H2A1D_HUMAN6.898e-3063.21Histone H2A type 1-D OS=Homo sapiens GN=HIST1H2AD ... [more]
H2A1C_RAT6.898e-3063.21Histone H2A type 1-C OS=Rattus norvegicus PE=1 SV=... [more]
H2A1C_HUMAN6.898e-3063.21Histone H2A type 1-C OS=Homo sapiens GN=HIST1H2AC ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-A05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756133 ID=EY756133; Name=EY756133; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGCCACGAAACCTGTCACTTTGTTGAAGTAAATCTTTCTGC
ATTTTGAGGTTGGGTCATGGATACACCAGTCAAAGTGAAGAAGGGAGCCG
GCGGAAGGAAGGGAGGAGGACCGAAAAAGCAATCCGTTTCCAGGTCTGTG
AAAGCGGGGCTCCAATTCCCAGTAGGTAGAATCGGGCGTTTCTTGAAGAA
GGGAAGATATTCGCAGCGTGTGGGTAGCGGTGCTCCAGTTTACATGGCCG
CTGTGCTCGAGTACCTAGCTGCTGAAGTGTTGGAGTTGGCTGGGAACGCG
GCACGTGACAACAAGAAGAAGAAGATCATCCCAAGGCACGTGCAATTAGC
GGTGAGGAATGATGAGGAGTTGGGGAAATTACTCACAGGTGTGACGATTG
CAAGCGGCGGCGTTTTGCCTAATATCAACCCAGTGCTGTTGCCAAAGAAG
ACTAAGGAAAGTGTTGCGAAGGAGCCCAAATCTCCATCCAAGGCTACCAA
GTCCCCAAAGAAAGCCTAGATTAGTTGTATCTTGAGTGCTACCGCATGTA
ATGTTCAGTCTAGGTTTTCCCATTTTGCTCTTTTTTCTTTTGATATATGC
TGTGTGTGTGTTGTTAGCATAGCCTCGGCCTGTTAAATGAATCGAAACAA
GTTGTTTTTTGTAACTATAAACCCCTTTCATATGGGGATTTAATTATAGT
TTATAAATCTTCTACAAAAAAAAAAAAAAAAAAAAGGGCGGCCGCCCTTT
TTTTTTTTTTTTTTTTTTTTGGATAATCTCATCCAGTACACATAGTTAAA
GATTAGCAAATGCAATCTCTGGTTACATAAAAAAAAAACTCATAACCATT
TTTCTTTTTGGCCTTTTTACCGATAC
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