EY756130

Overview
NameEY756130
Unique NameEY756130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756130 vs. ExPASy Swiss-Prot
Match: PAL3_PHAVU (Phenylalanine ammonia-lyase class 3 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.584e-29
Identity = 70/169 (41.42%), Postives = 94/169 (55.62%), Query Frame = 2
Query:   89 AKKVLTVGASGELHPSRFCEGGPL*TADR*HLFAYIDDPCNAASPLMLTVTQVLAEHTVNTRENQKIVNSSIFPIIAAGEEELRTVLTTHPDNATHTVENGTPPVPSTFKECRAYPMHRFTRNVLGSNFLTRENVSSSFHAFDKGFTPMCQRQRIPPMLECIRVWNVAP 595
            A K LT     E +P RF E   L   DR ++F+YIDDP N   PLM  + QVL E    +  N K V+  +F  I A E+EL+++L    ++A    ENG P  P+  KECR+YP+++F R  LG   LT E   S    F+K +T MCQ + I P+LEC+  WN  P
Sbjct:  539 ALKTLTTEDKEETNPFRFSEEELLKVVDREYVFSYIDDPLNVRYPLMPKLKQVLYEQAHTSVINDKNVSLLVFEKIGAFEDELKSLLPKEVESARVAYENGNPATPNRIKECRSYPLYKFVREELGIRLLTGEKALSPDEEFEKVYTAMCQAKIIDPILECLEDWNGVP 707          
BLAST of EY756130 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=ZB8 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.987e-29
Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 2
Query:   59 NCYATVLLFPAKKVLTVGASGELHPSRFCEGGPL*TADR*HLFAYIDDPCNAASPLMLTVTQVLAEHTVNTRENQKIVNSSIFPIIAAGEEELRTVLTTHPDNATHTVENGTPPVPSTFKECRAYPMHRFTRNVLGSNFLTRENVSSSFHAFDKGFTPMCQRQRIPPMLECIRVWNVAP 595
            +C  TV    AKK L+  ++G+LH +RFCE   L   DR  +FAY DDPC+   PLM  +  VL E  +     +   ++S+F  +A  EEELR  L    + A   VENGT  +PS   ECR+YP++RF R  LG+ +LT E   S     +K    + + + I P+LEC++ WN  P
Sbjct:  535 SCVMTV----AKKTLSTNSTGDLHVARFCEKDLLKEIDREAVFAYADDPCSHNYPLMKKLRNVLVERALANGAAEFNADTSVFAKVAQFEEELRATLPGAIEAARAAVENGTAAIPSRITECRSYPLYRFVREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNGEP 709          
BLAST of EY756130 vs. ExPASy Swiss-Prot
Match: PAL2_ORYSI (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. indica GN=ZB8 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.987e-29
Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 2
Query:   59 NCYATVLLFPAKKVLTVGASGELHPSRFCEGGPL*TADR*HLFAYIDDPCNAASPLMLTVTQVLAEHTVNTRENQKIVNSSIFPIIAAGEEELRTVLTTHPDNATHTVENGTPPVPSTFKECRAYPMHRFTRNVLGSNFLTRENVSSSFHAFDKGFTPMCQRQRIPPMLECIRVWNVAP 595
            +C  TV    AKK L+  ++G+LH +RFCE   L   DR  +FAY DDPC+   PLM  +  VL E  +     +   ++S+F  +A  EEELR  L    + A   VENGT  +PS   ECR+YP++RF R  LG+ +LT E   S     +K    + + + I P+LEC++ WN  P
Sbjct:  535 SCVMTV----AKKTLSTNSTGDLHVARFCEKDLLKEIDREAVFAYADDPCSHNYPLMKKLRNVLVERALANGAAEFNADTSVFAKVAQFEEELRATLPGAIEAARAAVENGTAAIPSRITECRSYPLYRFVREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNGEP 709          
BLAST of EY756130 vs. ExPASy Swiss-Prot
Match: PALY_HELAN (Phenylalanine ammonia-lyase OS=Helianthus annuus GN=PAL PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.021e-28
Identity = 62/126 (49.21%), Postives = 81/126 (64.29%), Query Frame = 2
Query:   89 AKKVLTVGASGELHPSRFCEGGPL*TADR*HLFAYIDDPCNAASPLMLTVTQVLAEHTVNTRENQKIVNSSIFPIIAAGEEELRTVLTTHPDNATHTVENGTPPVPSTFKECRAYPMHRFTRNVLG 466
            AKKVLT+G +GELHPSRFCE   L   DR ++FAY DDPC    PLM  + QVL +H +N  E +K  N+SIF  IA  E+EL+ +L    ++     ENGT  +P+  K CR+YP++RF R  LG
Sbjct:  539 AKKVLTMGVNGELHPSRFCEKDLLRVVDREYVFAYADDPCLTTYPLMQKLRQVLVDHALNNGETEKNANTSIFQKIATFEDELKAILPKEVESVRVAFENGTMSIPNRIKACRSYPLYRFVREELG 664          
BLAST of EY756130 vs. ExPASy Swiss-Prot
Match: PALY_PINTA (Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.515e-27
Identity = 62/165 (37.58%), Postives = 89/165 (53.94%), Query Frame = 2
Query:   89 AKKVLTVGASGELHPSRFCEGGPL*TADR*HLFAYIDDPCNAASPLMLTVTQVLAEHTVNTRENQKIVNSSIFPIIAAGEEELRTVLTTHPDNATHTVENGTPPVPSTFKECRAYPMHRFTRNVLGSNFLTRENVSSSFHAFDKGFTPMCQRQRIPPMLECIRVW 583
            AKK L+ G +GEL P RFCE   L   D  H+F+YIDDPCNA+ PL   +  +L EH     E +K  N+SIF  I   E EL+  L      A  + + GT P+P   +ECR+YP++ F RN LG+  L+     S     +  +  + + + I P+ +C+  W
Sbjct:  547 AKKTLSTGLNGELLPGRFCEKDLLQVVDNEHVFSYIDDPCNASYPLTQKLRNILVEHAFKNAEGEKDPNTSIFNKIPVFEAELKAQLEPQVSLARESYDKGTSPLPDRIQECRSYPLYEFVRNQLGTKLLSGTRTISPGEVIEVVYDAISEDKVIVPLFKCLDGW 711          
BLAST of EY756130 vs. ExPASy Swiss-Prot
Match: PAL1_ORYSJ (Phenylalanine ammonia-lyase OS=Oryza sativa subsp. japonica GN=PAL PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.248e-26
Identity = 71/179 (39.66%), Postives = 99/179 (55.31%), Query Frame = 2
Query:   59 NCYATVLLFPAKKVLTVGASGELHPSRFCEGGPL*TADR*HLFAYIDDPCNAASPLMLTVTQVLAEHTVNTRENQKIVNSSIFPIIAAGEEELRTVLTTHPDNATHTVENGTPPVPSTFKECRAYPMHRFTRNVLGSNFLTRENVSSSFHAFDKGFTPMCQRQRIPPMLECIRVWNVAP 595
            NC   V    AKKVLT+  +G+L  +RF E   L   DR  +F+Y DDPC+A  PLM  +  VL EH + + + +    +S+F  I   EEELR+ L    + A   V NGT PV +   E R++P++RF R  LG  FLT E + S     +K F  + Q + I PML+C++ WN  P
Sbjct:  525 NCVTQV----AKKVLTMNPTGDLSSARFSEKNLLTAIDREAVFSYADDPCSANYPLMQKLRAVLVEHALTSGDAEP--EASVFSKITKFEEELRSALPREIEAARVAVANGTAPVANRIVESRSFPLYRFVREELGCVFLTGEKLKSPGEECNKVFLGISQGKLIDPMLDCLKEWNGEP 697          
BLAST of EY756130 vs. ExPASy Swiss-Prot
Match: PAL3_ARATH (Phenylalanine ammonia-lyase 3 OS=Arabidopsis thaliana GN=PAL3 PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.478e-19
Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = 2
Query:  170 DR*HLFAYIDDPCNAASPLMLTVTQVLAEHTVNTRENQKIVNSSIFPIIAAGEEELRTVLTTHPDNATHTVENGTPPVPSTFKECRAYPMHRFTRNVLGSNFLTRENVSSSFHAFDKGFTPMCQRQRIPPMLECIRVWNVAP 595
            +R ++F+Y+DDP +  +PLM  +  VL +  +   E +     ++F  I A E EL+ +L    +      ENGT  V +  K+CR+YP++RF RN L +  LT E+V S    FDK F  + Q + I P+ EC++ WN AP
Sbjct:  552 NREYVFSYVDDPSSLTNPLMQKLRHVLFDKALAEPEGE---TDTVFRKIGAFEAELKFLLPKEVERVRTEYENGTFNVANRIKKCRSYPLYRFVRNELETRLLTGEDVRSPGEDFDKVFRAISQGKLIDPLFECLKEWNGAP 690          
The following BLAST results are available for this feature:
BLAST of EY756130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
PAL3_PHAVU4.584e-2941.42Phenylalanine ammonia-lyase class 3 OS=Phaseolus v... [more]
PAL2_ORYSJ5.987e-2939.11Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL2_ORYSI5.987e-2939.11Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PALY_HELAN1.021e-2849.21Phenylalanine ammonia-lyase OS=Helianthus annuus G... [more]
PALY_PINTA2.515e-2737.58Phenylalanine ammonia-lyase OS=Pinus taeda GN=PAL ... [more]
PAL1_ORYSJ1.248e-2639.66Phenylalanine ammonia-lyase OS=Oryza sativa subsp.... [more]
PAL3_ARATH1.478e-1936.62Phenylalanine ammonia-lyase 3 OS=Arabidopsis thali... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-A02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756130 ID=EY756130; Name=EY756130; organism=Citrus sinensis; type=EST; length=755bp
CCACGCGTCCGAATCTCTGTCTTTCCCTTACTAGTACCTCTGGAATGGTT
ACCATTAGAATTGCTATGCTACTGTGCTTTTATTTCCAGCTAAGAAAGTC
TTAACCGTCGGTGCTAGTGGAGAGCTTCATCCATCAAGATTCTGTGAGGG
GGGTCCGCTCTAAACGGCTGATCGTTAACACCTCTTTGCTTACATTGATG
ACCCCTGCAATGCTGCCTCTCCATTGATGCTAACGGTGACGCAAGTTCTT
GCTGAGCACACTGTGAACACACGGGAGAACCAGAAGATTGTCAACTCTTC
AATCTTCCCCATTATTGCAGCCGGTGAAGAGGAATTGAGGACCGTTCTGA
CGACCCATCCTGACAATGCCACGCACACTGTGGAGAATGGAACTCCCCCT
GTTCCCAGCACGTTCAAAGAATGCAGGGCTTACCCTATGCACAGGTTCAC
GAGGAACGTGCTCGGGTCTAATTTTCTAACTCGTGAAAATGTTTCCTCTT
CCTTTCACGCATTTGACAAAGGTTTTACCCCAATGTGCCAAAGACAGAGG
ATCCCTCCAATGCTCGAATGTATCAGGGTATGGAACGTCGCACCTCATCA
ATTTGTTAGGGGGTTTGGTTTTGTTTAAGGACCTGGCCCTCATACACTGG
TTTTCCCCCGTTCAAGAATTTGCCCATGCTATTCATAGGGAACATCTCCT
TCCGAACTGTACCAACCACCTCCCCTGGCTTGTTCAATTCAAGGGATTAA
AACCG
back to top