EY756102

Overview
NameEY756102
Unique NameEY756102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9412 contig Csv1_Contig9412:133..983. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756102 vs. ExPASy Swiss-Prot
Match: Y1570_MYCBO (Uncharacterized oxidoreductase Mb1570 OS=Mycobacterium bovis GN=Mb1570 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 53/197 (26.90%), Postives = 89/197 (45.18%), Query Frame = 3
Query:   18 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSR---NETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPK--EATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAXAPWIIRTSLI 593
            ++KG   L+TGG+ GIG A  +++   G  V   +R   N   +   I+  +  G       CDL        + + V  +  G ++IL+NNAG +I +  E +   + D+   M  N+  A  L     P ++    G+I+ +SSV      P    Y ++K A++ L   L  E   DN+R       ++RT +I
Sbjct:   50 AVKGKVVLITGGSSGIGAAAAKKIAEAGGTVVLVARTLENLENVANDIRAIRGNGGTAHVYPCDLSDMDAIAVMADQVLGDLGG-VDILINNAGRSIRRSLELSYDRIHDYQRTMQLNYLGAVQLILKFIPGMRERHFGHIVNVSSVGVQTRAPRFGAYIASKAALDSLCDALQAETVHDNVRFTTVHMALVRTPMI 245          
BLAST of EY756102 vs. ExPASy Swiss-Prot
Match: Y1543_MYCTU (Uncharacterized oxidoreductase Rv1543/MT1595 OS=Mycobacterium tuberculosis GN=Rv1543 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 53/197 (26.90%), Postives = 89/197 (45.18%), Query Frame = 3
Query:   18 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSR---NETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPK--EATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAXAPWIIRTSLI 593
            ++KG   L+TGG+ GIG A  +++   G  V   +R   N   +   I+  +  G       CDL        + + V  +  G ++IL+NNAG +I +  E +   + D+   M  N+  A  L     P ++    G+I+ +SSV      P    Y ++K A++ L   L  E   DN+R       ++RT +I
Sbjct:   50 AVKGKVVLITGGSSGIGAAAAKKIAEAGGTVVLVARTLENLENVANDIRAIRGNGGTAHVYPCDLSDMDAIAVMADQVLGDLGG-VDILINNAGRSIRRSLELSYDRIHDYQRTMQLNYLGAVQLILKFIPGMRERHFGHIVNVSSVGVQTRAPRFGAYIASKAALDSLCDALQAETVHDNVRFTTVHMALVRTPMI 245          
BLAST of EY756102 vs. ExPASy Swiss-Prot
Match: PGDH_CAVPO (15-hydroxyprostaglandin dehydrogenase [NAD+] OS=Cavia porcellus GN=HPGD PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 57/209 (27.27%), Postives = 103/209 (49.28%), Query Frame = 3
Query:   21 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRN-------ETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFD--GKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIF-ISSVTGVIAVPLCSIYASTKGAMNQLTKN--LACEWGKDNIRVNAXAPWIIRTSLIDSIEKD 611
            + G  ALVTG  +GIG A  E L   GA V     N       +  L+E  +  K+  ++     CD+   A++++L +T     D  G+L+ILVNNAG    K   +    +  ++++  +    ++S+      +  G G +I  +SS+ G++ V    +Y ++K  +   T++  +A +     +R+NA  P  + TS++ SIEK+
Sbjct:    3 VNGKVALVTGAAQGIGRAFAEGLLHKGAKVALVDWNLEAGVKCKAALDEEFEPQKTLFIQ-----CDV---ADQEQLRDTFTKVVDYFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSK------QHGGEGGVIINMSSLAGLMPVAQQPVYCASKHGIIGFTRSAAMARKLMNSGVRMNAICPGFVNTSILQSIEKE 197          
BLAST of EY756102 vs. ExPASy Swiss-Prot
Match: DHB12_RAT (Estradiol 17-beta-dehydrogenase 12 OS=Rattus norvegicus GN=Hsd17b12 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 54/196 (27.55%), Postives = 95/196 (48.47%), Query Frame = 3
Query:   27 GMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-GLKVSGSACDLKIRAERQKLMETVCSEFDG-KLNILVNNAGTTIPKEATEFTME------DFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAXAPWIIRTSL 590
            G  A+VTGGT GIG +  EEL   G  +   SR++ +L E     K K  ++    A D  +      + + + +   G ++ +LVNN G +   E  E+ +E          ++  N  S   +++L  P +     G I+ ISS +G++ VPL ++Y++TK  ++  ++ L  E+    I V +  P+ + T L
Sbjct:   50 GEWAVVTGGTDGIGKSYAEELAKRGMKIVLISRSQDKLKEVSNNIKEKFNVETRTIAVDFSL----DDIYDKIKTGLSGLEIGVLVNNVGMSY--EYPEYFLEIPDLDNTIKKLININVLSICKVTRLVLPGMVERSKGVILNISSASGMLPVPLLTVYSATKAFVDFFSQCLHEEYKSKGIFVQSVLPFFVATKL 239          
The following BLAST results are available for this feature:
BLAST of EY756102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 264
Match NameE-valueIdentityDescription
Y1570_MYCBO8.887e-1126.90Uncharacterized oxidoreductase Mb1570 OS=Mycobacte... [more]
Y1543_MYCTU8.887e-1126.90Uncharacterized oxidoreductase Rv1543/MT1595 OS=My... [more]
PGDH_CAVPO8.887e-1127.2715-hydroxyprostaglandin dehydrogenase [NAD+] OS=Ca... [more]
DHB12_RAT8.887e-1127.55Estradiol 17-beta-dehydrogenase 12 OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756102 ID=EY756102; Name=EY756102; organism=Citrus sinensis; type=EST; length=851bp
CCACGCGTCCGAGGTGGTCTCTAAAGGGTATGACCGCGCTTGTAACAGGT
GGAACCAGAGGCATCGGACACGCAATAGTGGAAGAACTAACGGCATTTGG
AGCAATAGTGCATACATGTTCACGTAATGAAACAGAGCTCAATGAAAGAA
TTCAAGAATGGAAGAGTAAGGGGCTTAAAGTAAGCGGCTCGGCATGTGAC
CTGAAAATTAGAGCTGAGCGTCAAAAGTTGATGGAGACTGTATGTTCTGA
ATTTGATGGCAAGCTCAACATCCTTGTAAACAATGCTGGAACCACCATTC
CTAAGGAAGCCACAGAATTTACCATGGAGGATTTCTCGACTATAATGACC
ACCAATTTCGAGTCTGCTTACCACCTGTCCCAACTTGCATACCCCCTACT
CAAAGCATCAGGAAATGGAAACATCATTTTTATCTCCTCTGTCACGGGTG
TTATAGCTGTACCTCTATGTTCCATCTATGCATCAACTAAAGGAGCAATG
AATCAACTGACAAAGAACTTGGCATGTGAGTGGGGAAAGGACAACATTCG
CGTGAATGCAGNTGCTCCATGGATCATTAGAACCTCTCTCATTGATTCCA
TAGAAAAGGATCCAAGGGTCATGGAACACGCTAGTCGTTTGATACCCCGT
ACTCCTATACCTCGTCCCAGAGAAACTAATGAGGTTTCGTCAGGGGTAGC
ATTCCCTATGTTTGCAGCCGCTTCATACGTCACCGGACAGGTTTTTTGTA
TTGATGGAAGATACTTCGGTGATGGATTTTANCCCTACGGACATGAAAAG
ATCCTTTAAATTTNCTGGCTGTCCCTCAAAGGCAGTTTAGGGCTTCATGG
T
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