EY756095

Overview
NameEY756095
Unique NameEY756095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length362
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756095 vs. ExPASy Swiss-Prot
Match: TBA3_HOMAM (Tubulin alpha-3 chain OS=Homarus americanus PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.006e-13
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 1
Query:   13 YSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 114
            Y+KRAFVHWYVGEGMEEGEF+EAREDLAALEKDY
Sbjct:  399 YAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDY 432          
BLAST of EY756095 vs. ExPASy Swiss-Prot
Match: TBA2_DROME (Tubulin alpha-2 chain OS=Drosophila melanogaster GN=alphaTub85E PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.006e-13
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 1
Query:   13 YSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 114
            Y+KRAFVHWYVGEGMEEGEF+EAREDLAALEKDY
Sbjct:  399 YAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDY 432          
BLAST of EY756095 vs. ExPASy Swiss-Prot
Match: TBA2_CAEEL (Tubulin alpha-2 chain OS=Caenorhabditis elegans GN=tba-2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.006e-13
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 1
Query:   13 YSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 114
            Y+KRAFVHWYVGEGMEEGEF+EAREDLAALEKDY
Sbjct:  397 YAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDY 430          
BLAST of EY756095 vs. ExPASy Swiss-Prot
Match: TBA1_HOMAM (Tubulin alpha-1 chain OS=Homarus americanus PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.006e-13
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 1
Query:   13 YSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 114
            Y+KRAFVHWYVGEGMEEGEF+EAREDLAALEKDY
Sbjct:  399 YAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDY 432          
BLAST of EY756095 vs. ExPASy Swiss-Prot
Match: TBA2_CHLRE (Tubulin alpha-2 chain OS=Chlamydomonas reinhardtii GN=TUBA2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 1
Query:   13 YSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 114
            Y+KRAFVHWYVGEGMEEGEFSEAREDLAALEKD+
Sbjct:  399 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDF 432          
BLAST of EY756095 vs. ExPASy Swiss-Prot
Match: TBA1_VOLCA (Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 1
Query:   13 YSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 114
            Y+KRAFVHWYVGEGMEEGEFSEAREDLAALEKD+
Sbjct:  399 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDF 432          
BLAST of EY756095 vs. ExPASy Swiss-Prot
Match: TBA1_STYLE (Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 1
Query:   13 YSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 114
            Y+KRAFVHWYVGEGMEEGEFSE REDLAALEKDY
Sbjct:  394 YAKRAFVHWYVGEGMEEGEFSEVREDLAALEKDY 427          
BLAST of EY756095 vs. ExPASy Swiss-Prot
Match: TBA1_PELFA (Tubulin alpha-1 chain OS=Pelvetia fastigiata GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 1
Query:   13 YSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 114
            Y+KRAFVHWYVGEGMEEGEFSEAREDL ALEKDY
Sbjct:  399 YAKRAFVHWYVGEGMEEGEFSEAREDLVALEKDY 432          
BLAST of EY756095 vs. ExPASy Swiss-Prot
Match: TBA1_CHLRE (Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii GN=TUBA1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 1
Query:   13 YSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 114
            Y+KRAFVHWYVGEGMEEGEFSEAREDLAALEKD+
Sbjct:  399 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDF 432          
BLAST of EY756095 vs. ExPASy Swiss-Prot
Match: TBA_GIBZE (Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.366e-12
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 1
Query:   13 YSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 114
            +SKRAFVHWYVGEGMEEGEFSEAREDLAALE+DY
Sbjct:  399 HSKRAFVHWYVGEGMEEGEFSEAREDLAALERDY 432          
The following BLAST results are available for this feature:
BLAST of EY756095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
TBA3_HOMAM8.006e-1394.12Tubulin alpha-3 chain OS=Homarus americanus PE=2 S... [more]
TBA2_DROME8.006e-1394.12Tubulin alpha-2 chain OS=Drosophila melanogaster G... [more]
TBA2_CAEEL8.006e-1394.12Tubulin alpha-2 chain OS=Caenorhabditis elegans GN... [more]
TBA1_HOMAM8.006e-1394.12Tubulin alpha-1 chain OS=Homarus americanus PE=2 S... [more]
TBA2_CHLRE1.046e-1294.12Tubulin alpha-2 chain OS=Chlamydomonas reinhardtii... [more]
TBA1_VOLCA1.046e-1294.12Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN... [more]
TBA1_STYLE1.046e-1294.12Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 S... [more]
TBA1_PELFA1.046e-1294.12Tubulin alpha-1 chain OS=Pelvetia fastigiata GN=TU... [more]
TBA1_CHLRE1.046e-1294.12Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii... [more]
TBA_GIBZE1.366e-1294.12Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-E07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756095 ID=EY756095; Name=EY756095; organism=Citrus sinensis; type=EST; length=362bp
CCACGCGTCCGGTACTCGAAGAGGGCGTTTGTGCATTGGTATGTGGGTGA
AGGCATGGAGGAAGGAGAGTTTTCGGAGGCTAGAGAGGATTTGGCTGCAC
TTGAGAAGGATTACGAGGAAGTTGGTGCTGAGTCTGCTGACGGAGAAGAA
GAAGAAGGAGACGAGTACTAGGCAGTGATATTGGATTTGTTCTTCTGCCA
ATGGACTCATTGGTCTGCCCTCGCTATAATGGATGATACCAGACTCATAT
GTAGCCGAACCTATGCTCTTTTTGCCTCTTTTTCGTGTTATATATTAGGC
CCAAATGAGTTAACAAAATTTGCACTGTTTTCAACCTTTATTTATTATAT
ATTTGAGGCACA
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