EY756066

Overview
NameEY756066
Unique NameEY756066
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8493 contig Csv1_Contig8493:113..1012. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.438e-46
Identity = 101/200 (50.50%), Postives = 129/200 (64.50%), Query Frame = 2
Query:  260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844
            WYGPDR  +L        E P YLTGE PGDYG+D   LS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    ++   + A+ A ++VL+G  E YR+  G   ++ D L+PGGSFDPLGLA DP+ FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+
Sbjct:   51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 246          
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.438e-46
Identity = 100/200 (50.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:  260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844
            WYG DR ++L  G    S  P YL+GE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G + PE   K G   G EAVWFK G+ +     L+Y G    ++   + A+ A +++L+G  E YR+  G   ++ED ++PGGSFDPLGLA DP+ FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN ++
Sbjct:   49 WYGSDRPLYL--GPFSGSP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSD 244          
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.438e-46
Identity = 103/200 (51.50%), Postives = 130/200 (65.00%), Query Frame = 2
Query:  260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844
            WYGPDR ++L  G L   E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    I+   + A+ A ++VL+G  E YRI  G   ++ D L+PGGSFDPLGLA DP+ F  LKVKE + GRLAM +M GFF+QA VTG+ P EN A+
Sbjct:   49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLAD 244          
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.438e-46
Identity = 101/200 (50.50%), Postives = 129/200 (64.50%), Query Frame = 2
Query:  260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P  F+K +  E+IH RW MLGA G + PE F + G   G EAVWFK G+ +     L+Y G    ++   + A+ A ++VL+G  E YR+  G   ++ D L+PGGSFDPLGLA DP+ FA L+VKE +NGRLAMF+M GFF+QA VTG+ P EN A+
Sbjct:   50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 245          
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.454e-46
Identity = 107/203 (52.71%), Postives = 131/203 (64.53%), Query Frame = 2
Query:  260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844
            WYG DR  FL        + P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G I PE  +K G   G EAVWFK GA +     L+Y G     NLV A  ++A    ++VL+G  E YR+  G   E  D L+PGG+FDPLGLA DP+ FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+
Sbjct:   48 WYGADRPKFLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFG-EAVWFKAGAQIFSEGGLDYLGNP---NLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLAD 243          
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.205e-46
Identity = 101/200 (50.50%), Postives = 128/200 (64.00%), Query Frame = 2
Query:  260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH RWAMLGA G + PE   + G   G EAVWFK G+ +     L Y G    ++   + A+ A ++VL+G  E YR+  G   ++ D L+PGGSFDPLGLA D + FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+
Sbjct:   48 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFG-EAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 243          
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.205e-46
Identity = 100/200 (50.00%), Postives = 129/200 (64.50%), Query Frame = 2
Query:  260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844
            WYGPDR  +L        E P YLTGE PGDYG+D  GLS  P+ F+K +  E+IH+RWAMLGA G + PE   + G   G EA WFK G+ +     L+Y G    I+   + A+ A +++L+G  E YRI  G   ++ D ++PGGSFDPL LA DP+ FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+
Sbjct:   29 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLAD 224          
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.185e-46
Identity = 101/197 (51.27%), Postives = 126/197 (63.96%), Query Frame = 2
Query:  260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXEN 835
            WYG DR  FL        E P YL GE  GDYG+D  GLS  P+ F++ +  E+IHARWAMLGA G + PE   K G   G EAVWFK GA +     L+Y G    ++   + A+ A ++VL+G  E YR+  G   ++ D ++PGGSFDPLGLA DPD FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN
Sbjct:   52 WYGADRPKFLGPF---SGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEN 244          
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.466e-46
Identity = 100/201 (49.75%), Postives = 129/201 (64.18%), Query Frame = 2
Query:  260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGLDL---EDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844
            WYG DR  +L        E P YLTGE PGDYG+D  GLS  P+ F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    ++   + A+ A +++L+G  E YR+     L   ED L+PGGSFDPLGLA DP+ FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+
Sbjct:   50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLAD 246          
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.466e-46
Identity = 100/201 (49.75%), Postives = 129/201 (64.18%), Query Frame = 2
Query:  260 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGLDL---EDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFAN 844
            WYG DR  +L        E P YLTGE PGDYG+D  GLS  P+ F++ +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y G    ++   + A+ A +++L+G  E YR+     L   ED L+PGGSFDPLGLA DP+ FA LKVKE +NGRLAMF+M GFF+QA VTG+ P EN A+
Sbjct:   50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLAD 246          
The following BLAST results are available for this feature:
BLAST of EY756066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
CB25_PETSP1.438e-4650.50Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB23_POLMU1.438e-4650.00Chlorophyll a-b binding protein type 1 member F3, ... [more]
CB22_MAIZE1.438e-4651.50Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_PETSP1.438e-4650.50Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB21_LEMGI2.454e-4652.71Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB22_HORVU3.205e-4650.50Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB21_SOYBN3.205e-4650.00Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB2_PHYPA4.185e-4651.27Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB22_ARATH5.466e-4649.75Chlorophyll a-b binding protein 2, chloroplastic O... [more]
CB21_ARATH5.466e-4649.75Chlorophyll a-b binding protein 165/180, chloropla... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-B12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756066 ID=EY756066; Name=EY756066; organism=Citrus sinensis; type=EST; length=899bp
TTCGTCGACCACGCGTCCGAGCAGCAACATTCCGAAGATGGCTTCATTGG
CAGCATCGTCCACTCCTGCTGCCTCCATTGGAGCTAAGGAGATGCTTGGC
AACCCTCTCAATGTCAGCAGTGCTGTTAGGACTTCAGCTCCAGGTGCATC
AAACCCTTCTACTTTCAAGCCCGTTGCTCTCTTCTCCAAGAAGAAAGCCG
CCCCTCCTGCCAAGTCTAAGCCCGTCGCCGTCTCCCCCGTTAACGAAGAG
CTCGCCAAGTGGTATGGTCCTGACCGAAGAATTTTCTTGCCCGAGGGTCT
CTTGGACAGATCTGAGATCCCTGAGTACTTGACCGGAGAAGTTCCCGGAG
ACTATGGTTACGATCCTTTTGGTCTCAGCAAGAAACCAGACGACTTCAGC
AAATATCAGGCATATGAATTGATTCATGCCAGATGGGCCATGCTTGGTGC
TGCTGGTTTCATCATTCCTGAAGCCTTTAACAAGTTTGGTGCTAACTGTG
GTCCTGAAGCTGTCTGGTTCAAGACTGGAGCTCTACTTCTTGATGGAAAC
ACATTGAACTACTTCGGAAAGAACATCCCAATCAACCTTGTTTTTGCTGT
CATTGCTGAGATTGTTCTTGTAGGTGGTGCTGAATATTATAGAATCACCA
ACGGTTTGGATTTGGAGGACAAGCTTCACCCAGGTGGGTCATTTGACCCA
CTGGGATTAGCAAAGGATCCTGACCAATTTGCATTGCTAAAAGTGAAGGA
GATNCAGAATGGAAGACTTGCAATGTTTGCCATGCTTGGGTTCTTTCTCC
AAGCTTATGTCACAGGTGAAAGTCCCGNTGAGAACTTTGCTAACATCTCA
GTGACCTTTTGCCACCAACCTGGTTACGTGATCTTCGGAAACGCAAAAA
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