EY756066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.496e-27 Identity = 74/176 (42.05%), Postives = 99/176 (56.25%), Query Frame = 2 Query: 320 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFL-QAYVTGESPXENFA 841 P +L G PGD+G+DP GL+ P++F +++ E+ H RWAML G ++PEA N W A L DG Y G +P NL + E + + AE R T D E K +PGG+FDPLG +KDP +F LK+KE +NGRLAM A +GF + Q+ G P EN A Sbjct: 55 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGL--GNWVKAQEW----AALPDGQA-TYLGNPVPWGNLPTILAIEFLAIAFAEQQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLA 222
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.185e-24 Identity = 80/195 (41.03%), Postives = 105/195 (53.85%), Query Frame = 2 Query: 326 YLTGEVPGDYGYDPFGLSKKPDDFS----KYQAY-ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGS-FDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXEN 835 YL G +PGD+G+DP GLS K+ AY E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T NY+ N + + E+ L+G AE+ R + L LE D +PGG F+PLG KD LK+KE +NGRLAM A+LG+F+QA VTG P +N Sbjct: 65 YLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAG-TYNYWADNYTL-----FVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQN 253
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.310e-23 Identity = 78/213 (36.62%), Postives = 102/213 (47.89%), Query Frame = 2 Query: 269 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYR----------------ITNGLDLEDKLHPGGS-FDPLGLAK-DPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXEN-FANIS 850 PDR ++ P S P +L G +PGD+G+DP GL+ P+ Q EL+H RWAMLGAAG IPE K G P W+ G +T F I E+VL+G AE R N L D +PGG FDPLG P + L+ KE +NGRLAM A++G + Q TG P +N FA+++ Sbjct: 63 PDRPLWFPG-----STPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS--WYTAGEQEYFTDTTTLF------------IVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLA 256
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.711e-23 Identity = 77/213 (36.15%), Postives = 102/213 (47.89%), Query Frame = 2 Query: 269 PDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYR----------------ITNGLDLEDKLHPGGS-FDPLGLAK-DPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXEN-FANIS 850 PDR ++ P S PE+L G +PGD+G+DP GL P+ EL+H+RWAMLGAAG IPE K G P W+ G +T F + E+VL+G AE R N L D +PGG FDPLG P + L+ KE +NGRLAM A++G + Q TG P +N FA+++ Sbjct: 63 PDRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS--WYTAGEQEYFTDTTTLF------------VIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLA 256
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.919e-23 Identity = 77/195 (39.49%), Postives = 103/195 (52.82%), Query Frame = 2 Query: 326 YLTGEVPGDYGYDPFGLSKKPDDFS----KYQAY-ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGSF-DPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXEN 835 YL G +PGDYG+DP GLS ++ AY E+I+ R+AMLGA G I PE K G A+ WF+TG + G T NY+ N + + E+ L+G AE+ R + L LE + +PGG F +PLG KD LK+KE +NGRLAM A+LG+F+Q VTG P +N Sbjct: 67 YLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAG-TYNYWADNYTL-----FVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQN 255
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.978e-23 Identity = 76/221 (34.39%), Postives = 104/221 (47.06%), Query Frame = 2 Query: 320 PEYLTGEVPGDYGYDPFGLSK----------------------------------KPDDFSKY---------QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFANIS 850 PE+L G + GD G+DPFGL K KP F Y + ELIH RWAMLG G I EA W G + L++G++ Y G+ +P +L + E+++VG E+ R + LD E +++PGG FDPLGLA DP++ LK+ E ++ RLAM A L F LQA TG+ P A + Sbjct: 66 PEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIA--------WQDAGKVELVEGSS--YLGQPLPFSLTTLIWIEVLVVGYIEFQR-NSELDPEKRIYPGGYFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFLATFN 275
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.471e-22 Identity = 77/241 (31.95%), Postives = 111/241 (46.06%), Query Frame = 2 Query: 254 AKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD-------------------------------------------DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGSF-DPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFA 841 AK DR ++ P ++ PEYL G + GDYG+DPFGL K + +++ ELIH RWAML G I E W G + L+DG++ Y G+ +P ++ + E++++G E+ R LD E +L+PGG F DPLGLA DP + A L++ E ++ RLAM LGF +QA TG+ P N+A Sbjct: 45 AKTVISDRPLWFPG-----AKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLPFSISTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWA 269
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.189e-22 Identity = 70/219 (31.96%), Postives = 104/219 (47.49%), Query Frame = 2 Query: 320 PEYLTGEVPGDYGYDPFGLSKKPD-------------------------------------------DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGSF-DPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFA 841 P++L G + GDYG+DPFGL K + +++ ELIH RWAML G + E W G + L+DG++ Y G+ +P ++ + E++++G E+ R LD E +L+PGG F DPLGLA DP++ A L++ E ++ RLAM A LGF +QA TG+ P N+A Sbjct: 65 PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLPFSISTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWA 272
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 7.189e-22 Identity = 71/223 (31.84%), Postives = 105/223 (47.09%), Query Frame = 2 Query: 320 PEYLTGEVPGDYGYDPFGLSKK------------------------------PDDFS---------------KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGSFDPLGLAKDPDQFAL-LKVKEXQNGRLAMFAMLGFFLQAYVTGESPXENFANIS 850 PE+L G +PGD G+DP GLSK PD+ S +++ ELIH RWAML G ++ EA W + G + LDG +Y G ++P ++ + E++LVGGAE+YR + + E + +PGG FDPL LA + ++ A LK E ++ RLAM + G+ +QA TGE + A + Sbjct: 60 PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVS--------WVEAGKVELDG--ASYAGLSLPFSITQLIWIEVILVGGAEFYR-NSETNPEKRCYPGGVFDPLKLASEDEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSLAKFA 271
BLAST of EY756066 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.189e-22 Identity = 69/185 (37.30%), Postives = 96/185 (51.89%), Query Frame = 2 Query: 320 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITN-GLDLEDKL------------HPGGSFDPLGLAKDPDQFALLKVKEXQNGRLAMFAMLGFFLQAYVTGESPXEN 835 P+YLTG + GD G+DP GL++ P++ + EL++ RWAMLG AG ++PE F K G PE W+ D YF + + ++ ++ V + + I N G +D + +PGG F+PL A P Q A K KE NGRLAM A LGF +Q VTG+ P EN Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPE--WY-------DAGKEQYFASSSTLFVIEFILFHYVEI--RRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFA--PTQEA--KEKELANGRLAMLAFLGFVVQHNVTGKGPFEN 233 The following BLAST results are available for this feature:
BLAST of EY756066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756066 ID=EY756066; Name=EY756066; organism=Citrus sinensis; type=EST; length=899bpback to top |