EY756061
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL6B_YEAST (60S ribosomal protein L6-B OS=Saccharomyces cerevisiae GN=RPL6B PE=1 SV=4) HSP 1 Score: 164.466 bits (415), Expect = 7.729e-40 Identity = 88/170 (51.76%), Postives = 110/170 (64.71%), Query Frame = 1 Query: 214 FYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 +YP++DV P ++ +P KLRAS+ PGTVLI+LAGRF+GKRVV+LK L LLV+GPFK+NGVPLRRVN YVI TSTKV + GVNV+KF+ +YFAK E+ + E+ +DQK VD L I+ P LK YL A FSL+ G KPH L F Sbjct: 9 WYPSEDVAAPKKTRKAVRPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLVTGPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEKFNVEYFAK--EKLTKKEKKEANLFPEQQTKEIKTERVEDQKVVDKALLAEIKKTPLLKQYLSASFSLKNGDKPHLLKF 176
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL6A_YEAST (60S ribosomal protein L6-A OS=Saccharomyces cerevisiae GN=RPL6A PE=1 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 3.836e-39 Identity = 87/170 (51.18%), Postives = 109/170 (64.12%), Query Frame = 1 Query: 214 FYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKFDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 +YP++DV ++ +P KLRAS+ PGTVLI+LAGRF+GKRVV+LK L LL+SGPFK+NGVPLRRVN YVI TSTKV + GVNV+KF+ +YFAK E+ + E+ +DQK VD L I+ P LK YL A FSL+ G KPH L F Sbjct: 9 WYPSEDVAALKKTRKAARPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLISGPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEKFNVEYFAK--EKLTKKEKKEANLFPEQQNKEIKAERVEDQKVVDKALIAEIKKTPLLKQYLSASFSLKNGDKPHMLKF 176
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL6_SCHPO (60S ribosomal protein L6 OS=Schizosaccharomyces pombe GN=rpl6 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.508e-35 Identity = 83/171 (48.54%), Postives = 110/171 (64.33%), Query Frame = 1 Query: 214 FYPADDVKKPLVNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTST-KVDISGVNVDKFDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 +YPA P ++ +PTKLRAS+ PGTV I+LAGRF+GKRVV L QL L+V+GP+K+NGVP+RRVN YVI TS K+D+SGV+V+KF YFAK+ +R LP E+ DQK+VD L AI+A+P++K YL A F+L G +PH + F Sbjct: 27 YYPAYRENVPKKARKAVRPTKLRASLAPGTVCILLAGRFRGKRVVVLSQL-EDTLVVTGPYKVNGVPIRRVNHRYVIATSAPKIDVSGVSVEKFTKAYFAKQ-KRSGPVKKDEAFFAENAPKNALPAERIADQKAVDAKLLPAIKAIPNMKEYLAASFALSNGDRPHLMKF 195
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL6_DICDI (60S ribosomal protein L6 OS=Dictyostelium discoideum GN=rpl6 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.845e-31 Identity = 75/158 (47.47%), Postives = 96/158 (60.76%), Query Frame = 1 Query: 253 KRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNV-DKFDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLKAYLGARFSLRAGMKPHELVF 723 K+ + LR SITPGTVLIILAGRF GKRVV LKQL SGL+L++GPFK+NGVPLRR++Q YVI TSTK+D+S V V +D YFA E + + + DQKSVD+ + ++ L YL +F L+ G PH+L F Sbjct: 79 KKVQQKVALRKSITPGTVLIILAGRFAGKRVVALKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKSTTKSEGAFFSDEKKAEKKKIADSRVADQKSVDSAILAVLKKEKFLTVYLKTKFYLKKGEFPHQLKF 236
BLAST of EY756061 vs. ExPASy Swiss-Prot
Match: RL6_CAEEL (60S ribosomal protein L6 OS=Caenorhabditis elegans GN=rpl-6 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.119e-30 Identity = 92/245 (37.55%), Postives = 127/245 (51.84%), Query Frame = 1 Query: 25 MAPKQGKPRVSRNPELIRGIGKFSRSKMYHKRGLWAIKAKNGGVFPRHDXXXXXXXXXXXXXXFYPADDVKKPLVNKR-------KPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLP-SGLLLVSGPFKINGVPLRRVNQSYVIGTSTKVDISGVNV-DKFDDKYFAKEVERXXXXXXXXXXXXXXXXXXXLPQEKKDDQKSVDTPLXQAIEAVPDLK---AYLGARFSLRAGMKPHELVF 723 M K+ P +SRN +L G+ +FS S++ K+G K F K P + + K LR ++TPGTVLI+LAGR KGKRVVFLKQLP SGLLLV+GP KING PLRR+ Q++VI TS KV++SGV + + +D+YF + + + +++K D K+VD P+ AI+ P+ K YLG RFSL PH++ F Sbjct: 1 MVGKRNLPVISRNFDLSPGVLRFSASRLRLKKGEKKPK-------------------------FTKDTSAKLPKLQRNGTKFALGHSKTVTLRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATSLKVNVSGVKIPEHINDEYFKR---KSTAQKTGKNIFASGKTEYTVSEQRKKDIKTVDAPILAAIKKHPEHKFLFGYLGTRFSLGKNQYPHKMQF 217 The following BLAST results are available for this feature:
BLAST of EY756061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756061 ID=EY756061; Name=EY756061; organism=Citrus sinensis; type=EST; length=904bpback to top |