EY756056
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.080e-28 Identity = 79/190 (41.58%), Postives = 98/190 (51.58%), Query Frame = 3 Query: 24 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR---SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 557 P YL G PGD+G+D L PE +RY+E ELIH RWAML G PE L G W +A GG YLGNP V + ++ + + +E R + YPG +FDPLG + DP F E KVKEIKNGRLA + GF V Q+ G GP++NL HLA+P NN Sbjct: 54 PAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGG-LDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFV-QAIVTGKGPVQNLDDHLANPTVNN 241
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.253e-28 Identity = 80/196 (40.82%), Postives = 101/196 (51.53%), Query Frame = 3 Query: 15 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 557 E P YL G PGD+G+D + PE + +E E+IHCRWAML G + PE L G W +A GG Y GNP + ++ I + + + +E R DP PGGAFDPLG + DP+ E KVKEIKNGRLA+ + GF V Q+ G GP+ENL HLADP NN Sbjct: 64 EGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGG-LDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDP---LLPGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLYDHLADPVANN 254
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.607e-27 Identity = 81/197 (41.12%), Postives = 104/197 (52.79%), Query Frame = 3 Query: 12 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 557 G P P YL G PGD+G+D L PE + +E E+IHCRWA+ G + PE L G G W +A GG ++ GNP V ++ I + + + VE DP Y GG+FDPLG DP++F E KVKEIKNGRLA+ + GF V Q+ G GP+ENLA HL DP +NN Sbjct: 62 GSP-PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGG-LSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDP---LYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLTDPVNNN 252
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.405e-27 Identity = 80/194 (41.24%), Postives = 104/194 (53.61%), Query Frame = 3 Query: 18 PRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQ---AQEW-----AAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKK----YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 557 PR P G PGD+G+D L PE +RY+E ELIH R +L G++ PE L + ++ A W A G YLGNP + + L ++ + + VE R + P + YPG AFDPLG + DP F E KVKEIKNGRLA+ A +GF V Q+ G GP+ENL HLA+P NN Sbjct: 73 PRLP--TGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYR-VNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFV-QAIVTGKGPIENLTDHLANPAENN 262
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.207e-26 Identity = 82/191 (42.93%), Postives = 99/191 (51.83%), Query Frame = 3 Query: 24 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQE--WAAVPG-----GQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEKD---PEKKKYPGGA-FDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 557 P YL+G PGD+G+D L PE R + E+IH RWAML G + PE L V+ +E W G YLGNP V ++ +L + L + VE R D YPGG FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GPLENL HL DP NN Sbjct: 67 PSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLFDHLDDPVANN 256
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.882e-26 Identity = 82/207 (39.61%), Postives = 106/207 (51.21%), Query Frame = 3 Query: 30 YLDGSAPGDFGFDPLRLGEVPENLERYKE------SELIHCRWAMLAVPGILVPEALGLGNWV-QAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQR----------------SMEK------DPEKKKYPGGA-FDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 560 YLDG PGDFGFDPL L + PE + E E+I+ R+AML G + PE LG + Q A G G W T+ V+E + F EH+R +EK DP YPGG F+PLGF KD + +E K+KEIKNGRLA+LA +G+ + Q+ G GP +NL HLADP +NN+ Sbjct: 65 YLDGRLPGDFGFDPLGLSD-PEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPA---YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFI-QALVTGVGPYQNLLDHLADPVNNNV 266
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.095e-25 Identity = 80/204 (39.22%), Postives = 105/204 (51.47%), Query Frame = 3 Query: 30 YLDGSAPGDFGFDPLRLGEVPENLERYKE------SELIHCRWAMLAVPGILVPEALG-LGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQR--------SMEKD-----------PEKKKYPGGAF-DPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 560 YLDGS PGD+GFDPL L + PE + E E+I+ R+AML G + PE LG +G Q A G G W T+ V+E + F EH+R SM K YPGG F +PLGF KD + +E K+KE+KNGRLA+LA +G+ + Q G GP +NL H+ADP +NN+ Sbjct: 67 YLDGSLPGDYGFDPLGLSD-PEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFI-QGLVTGVGPYQNLLDHVADPVNNNV 268
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.582e-24 Identity = 78/193 (40.41%), Postives = 97/193 (50.26%), Query Frame = 3 Query: 24 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAV---------PGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEKD---PEKKKYPGGA-FDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 557 P YL+G PGD+G+D L PE + + E+IH RWAML G + PE L WV+ V G YLGNP V ++ +L + + + VE R YPGG FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GPLENL HL +P NN Sbjct: 64 PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLE--KWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLLDHLDNPVANN 253
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.602e-24 Identity = 78/193 (40.41%), Postives = 97/193 (50.26%), Query Frame = 3 Query: 24 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 557 P YL G G L PE + +E E+IH RWAML G + PE L G W +A GG YLGNP + ++ I + + + VE R DP YPGG+FDPLG + DP+ E KVKE+KNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 65 PSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPI---YPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 244
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 8.679e-23 Identity = 83/231 (35.93%), Postives = 112/231 (48.48%), Query Frame = 3 Query: 9 PGEPRPPYLDGSAPGDFGFDPLRLGE--------VPEN-------------------------------------LERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGF-SKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIG 563 P RP +LDGS PGD GFDPL L + V EN L R++E ELIH RWAMLA G LV EA +WV+A V A+Y G +P+ ++ ++ IE + + E R+ E +PEK+ YPGG FDPL S+D ++ K EIK+ RLA+++F G+ V Q+ G G L +LA AD +N G Sbjct: 55 PNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEA---GKVELDGASYAGLSLPF-SITQLIWIEVILVGGAEFYRNSETNPEKRCYPGGVFDPLKLASEDEERAFRLKTAEIKHARLAMVSFFGYGV-QALSTGEGALGSLA-KFADGLNNGKG 279 The following BLAST results are available for this feature:
BLAST of EY756056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756056 ID=EY756056; Name=EY756056; organism=Citrus sinensis; type=EST; length=770bpback to top |