EY756056
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.265e-20 Identity = 71/189 (37.57%), Postives = 89/189 (47.09%), Query Frame = 3 Query: 9 PGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVII 575 P P +L+G GD GFDP L P+ ER + +E+ H R AMLAV G LVP+ LG G W +A + A + L + + F + E YPG FDPL + D K EIKNGRLAL A +GF VQ+ G+ PL NLA HL P NI D I+ Sbjct: 7 PNTLAPSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGKGIWYEAAQNAGI---------------GLKEVAIFTAAYGVFEVARGVKENSDPTTIYPG--FDPLNLTTD-----YTKEAEIKNGRLALTALLGFEVQRHVVGGS-PLANLAEHLQQPLQRNIADSIM 172 HSP 2 Score: 88.1965 bits (217), Expect = 5.449e-17 Identity = 68/192 (35.42%), Postives = 89/192 (46.35%), Query Frame = 3 Query: 9 PGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAF---VEHQR-----SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 560 P P L G P D GFDPL L P+ R + +E+ H R AML G +VPE LG G W +A + +V G L + F+++A E+ R + +K + YPG FDPL + D + E+KNGRLAL A G Q A G PL NL+ HLA+P NI Sbjct: 192 PNAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGKGAWFEAGD--SVDG------------------LKLGFITMAIAAPTEYWRGQGGFNWQKGELDRSYPG--FDPLNLTTD-----YTRAAEVKNGRLALTAVAGLTAQYLA-TGESPLANLSAHLANPIGANI 355 HSP 3 Score: 81.6481 bits (200), Expect = 5.100e-15 Identity = 63/173 (36.42%), Postives = 80/173 (46.24%), Query Frame = 3 Query: 24 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRS------MEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENL 524 P YL G A GD GFDP L P ER + +E+ HCR +MLA+ G LVPE LG G W Q W V + V+ +A +E+ R +++ + YPG FDPL + E K EIKNGRLA+ G V QS G P+ NL Sbjct: 381 PRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLGNGAWFQI--WDKVDFNR---------------FAVVALQVVAPLEYWRGNGGFLWNDEETVDQSYPG--FDPLNLTT-----EYTKEAEIKNGRLAMNGMFGLEV-QSHVTGKSPINNL 528
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.877e-20 Identity = 73/190 (38.42%), Postives = 95/190 (50.00%), Query Frame = 3 Query: 24 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-----GLGN--WVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSME---KDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 557 P YL G PGD+G+D L PE + +E E+IH R AM A G + PE L G G W +A GG YLGNP V ++ I + + + VE R + YP G+FD LG ++D + F E KVKE+KNGRLA+ + GF V Q+ LENLA HL +NN Sbjct: 70 PSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGG-LDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYP-GSFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFV-QAIVSRKDRLENLADHLGWTVNNN 256
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.532e-19 Identity = 73/184 (39.67%), Postives = 95/184 (51.63%), Query Frame = 3 Query: 24 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSME-KDPEKKK----------------------YPGGA-FDPLG---------FSKDPQKFEEYKVKEIKNGRLALLAFVGF 476 P +LDGS PGDFGFDPL LG+ P L+ Y+E+ELIH RWAMLAV GI V +A W +A A PG A P +GTL L + L + +VE +R ++ DP+ + YPGG FDPL ++ D K E K+ EIK+ RLA+LA + F Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGIPWFEA---GADPGAVA-----PFSFGTL---LGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLIF 245
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.930e-19 Identity = 71/184 (38.59%), Postives = 94/184 (51.09%), Query Frame = 3 Query: 24 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSME-KDPEKKK----------------------YPGGA-FDPLG---------FSKDPQKFEEYKVKEIKNGRLALLAFVGF 476 P +LDGS PGD+GFDPL LG+ P L+ Y+E+ELIH RWAM AV GI V +A W +A A PG A P +GTL L + + + +VE +R ++ DP+ + YPGG FDPL + D +K E KV EIK+ RLA+LA + F Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEA---GADPGAIA-----PFSFGTL---LGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIF 240
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: LH15_EUGGR (Light-harvesting complex I LH35 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.297e-18 Identity = 70/189 (37.04%), Postives = 89/189 (47.09%), Query Frame = 3 Query: 9 PGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQR-----SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 560 PG P +L G P D GFDPL + P R + SE+ H R +MLA+ G +VPE LG G W + +GN V L IL+ A E+ R + +K + YPG FDPL + D Y +EIKNGRLA+ +G Q A G PL NLA H A+P NI Sbjct: 164 PGAQPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGKGAWFE--------------VGNSVDGIKLGFILM---AIAAPTEYWRGNGGFNWDKGTADRSYPG--FDPLKLTTD------YTKREIKNGRLAMTGLLGLTFQYLA-TGESPLANLAAHFANPVGANI 326
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.436e-18 Identity = 71/184 (38.59%), Postives = 94/184 (51.09%), Query Frame = 3 Query: 24 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSME----------------KDPE-------KKKYPGGA-FDPLG---------FSKDPQKFEEYKVKEIKNGRLALLAFVGF 476 P +LDGS PGDFGFDPL LG+ P L+ Y+E+ELIH RWAM AV GI V +A W +A A PG A P +G+L L + L + +VE +R ++ K E ++ YPGG FDPL + D +K E K+ EIK+ RLA+LA + F Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEA---GADPGAIA-----PFSFGSL---LGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIF 240
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.446e-17 Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 360 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 557 YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 40 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 104
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.446e-17 Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 360 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 557 YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 189 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.446e-17 Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 360 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 557 YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 189 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
BLAST of EY756056 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.172e-17 Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 3 Query: 360 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 557 YPGG+FDPLG ++DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPLENLA H+ADP +NN Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHIADPVNNN 255 The following BLAST results are available for this feature:
BLAST of EY756056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756056 ID=EY756056; Name=EY756056; organism=Citrus sinensis; type=EST; length=770bpback to top |