EY756039

Overview
NameEY756039
Unique NameEY756039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCA_ORYSJ (Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica GN=Os07g0577700 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.992e-19
Identity = 65/184 (35.33%), Postives = 96/184 (52.17%), Query Frame = 3
Query:   15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 566
            +IGP   G I+ G  KIG   G I        ++PG VG VS+SG ++ E       V  G    + IGGD F G+   D + +F + PQ + +V++GE+GG  E      +++ K  KPVVA+++G  A   +   + GHAGA   G   +AQ K +ALR+AG  V  S     S + E F++
Sbjct:  154 LIGPNCPGIIKPGECKIGIMPGYI--------HKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAAAFIQESKTQKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFKQ 326          
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCA2_ARATH (Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial OS=Arabidopsis thaliana GN=At5g23250 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.034e-18
Identity = 64/184 (34.78%), Postives = 96/184 (52.17%), Query Frame = 3
Query:   15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 566
            +IGP   G I+ G  KIG   G I        ++PG +G VS+SG ++ E       V  G    + IGGD F G+   D + +F   PQ + +V++GE+GG  E      +K+   +KPVVA+++G  A   +   + GHAGA   G   +AQ K ++LRDAG  V  S     +A+ E F++
Sbjct:  164 LIGPNCPGIIKPGECKIGIMPGYI--------HKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKENGTDKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKSLRDAGVKVVESPAKIGAAMFELFQE 336          
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCA1_ARATH (Succinyl-CoA ligase [GDP-forming] subunit alpha-1, mitochondrial OS=Arabidopsis thaliana GN=At5g08300 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.731e-18
Identity = 64/184 (34.78%), Postives = 93/184 (50.54%), Query Frame = 3
Query:   15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 566
            +IGP   G I+ G  KIG   G I        ++PG +G VS+SG ++ E       V  G    + IGGD F G+   D + +F   PQ + +V++GE+GG  E      +K     KPVVA+++G  A   +   + GHAGA   G   +AQ K ++L DAG  V  S     SA+ E F++
Sbjct:  169 LIGPNCPGIIKPGECKIGIMPGYI--------HKPGKIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGTAEEDAAALIKASGTEKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKSLNDAGVKVVESPAKIGSAMYELFQE 341          
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCA_PIG (Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Sus scrofa GN=SUCLG1 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.249e-17
Identity = 65/187 (34.76%), Postives = 96/187 (51.34%), Query Frame = 3
Query:   15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ---GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 566
            +IGP   G I  G  KIG   G I        ++ G +G VS+SG ++ E  +   +V  G    + IGGD F G+  +D +  F N P  + ++++GE+GG  E +  E LKQ   G  +KPVV++++G  A   +   + GHAGA   G    A+ K  AL+ AG VV  S     + I + FEK
Sbjct:  167 LIGPNCPGVINPGECKIGIMPGHI--------HKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKSKPVVSFIAGLTAPPGR---RMGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYKEFEK 342          
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCD_RICCN (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia conorii GN=sucD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.011e-17
Identity = 59/170 (34.71%), Postives = 87/170 (51.18%), Query Frame = 3
Query:   15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTS 524
            +IGP   G I  G  KIG   G I        ++ G++G VS+SG ++ E       V  G    I IGGD   G+   D I  F    + K ++++GE+GG  E    E +KQ K+ KP+V++++G  A   K   + GHAGA   G   SA+ K +AL+ AG ++  S
Sbjct:  119 LIGPNCPGVITPGECKIGIMPGHI--------HKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTCIGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSKIKKPIVSFIAGITAPPGK---RMGHAGAIIVGRTGSAEDKLEALQSAGVIITRS 277          
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCD1_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit alpha 1 OS=Archaeoglobus fulgidus GN=sucD1 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.011e-17
Identity = 57/170 (33.53%), Postives = 92/170 (54.12%), Query Frame = 3
Query:    6 RPVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVV 515
            + +++GP   G I  G  K+G        ++  + +  G++G VS+SG ++ ++   + +   G    + IGGD  PG T  D +  F    + K ++++GE+GG  E    E +KQ  ++KPVVA+++G  A   K   + GHAGA   G   +A+AK  ALRDAGA V
Sbjct:  119 KSMLLGPNCPGVISPGRSKVG--------LLPDRSFTQGNLGVVSRSGTLTYQICENLTKAGIGQSTVVGIGGDPMPGLTFVDVLKMFEEDEETKAVLLVGEIGGTAEEKAAEFIKQ--MSKPVVAFIAGRTAPPGK---RMGHAGAIIEGSTGTAEAKMAALRDAGARV 275          
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCA_SCHPO (Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Schizosaccharomyces pombe GN=SPAC16E8.17c PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.011e-17
Identity = 61/189 (32.28%), Postives = 94/189 (49.74%), Query Frame = 3
Query:   15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVN----KPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKL 569
            ++GP   G I+ G  KIG        I+   +++PG +G VS+SG ++ E  N   +   G    I IGGD FPG+   D +  F + P  + ++++GE+GG  E    E ++    +    KPVV++++G  A   +   + GHAGA   G   +A AK +AL  AG  +  S     S I E   KL
Sbjct:  152 LVGPNCPGIIRPGQCKIG--------IMPSHIHKPGCIGIVSRSGTLTYEAVNQTTQTDLGQSLVIGIGGDPFPGTNFIDALKLFLDDPNTQGIILIGEIGGSAEEDAAEFIRAANASRSTPKPVVSFIAGATAPKGR---RMGHAGAIVAGGKGTAAAKFEALEAAGVRISRSPATLGSLIVEELNKL 329          
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCA_BOVIN (Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Bos taurus GN=SUCLG1 PE=2 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 1.116e-16
Identity = 64/187 (34.22%), Postives = 95/187 (50.80%), Query Frame = 3
Query:   15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ---GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 566
            ++GP   G I  G  KIG   G I        ++ G VG VS+SG ++ E  +   +V  G    + IGGD F G+  +D +  F N P  + ++++GE+GG  E +  E LKQ   G   KPVV++++G  A   +   + GHAGA   G    A+ K  AL+ AG VV  S     + + + FEK
Sbjct:  167 LVGPNCPGVINPGECKIGIMPGHI--------HKKGRVGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGEIGGNAEENAAEFLKQHNSGPKAKPVVSFIAGLTAPPGR---RMGHAGAIIAGGKGGAKEKIAALQSAGVVVSMSPAQLGTTMYKEFEK 342          
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCD_RICFE (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia felis GN=sucD PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.458e-16
Identity = 58/170 (34.12%), Postives = 86/170 (50.59%), Query Frame = 3
Query:   15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTS 524
            +IGP   G I  G  KIG   G I        ++ G++G VS+SG ++ E       V  G    + IGGD   G+   D I  F    + K ++++GE+GG  E    E +KQ K+ KP+V++++G  A   K   + GHAGA   G   SA+ K +AL+ AG  +  S
Sbjct:  119 LIGPNCPGVITPGECKIGIMPGHI--------HKRGTIGIVSRSGTLTYEAVAQTTAVGLGQSTCVGIGGDPVNGTNFVDCIDMFLKDDETKAIIMIGEIGGNAEEDAAEFIKQSKIKKPIVSFIAGITAPPGK---RMGHAGAIIAGGKGSAEDKLEALQSAGVTITRS 277          
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCD_RICTY (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia typhi GN=sucD PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.904e-16
Identity = 57/170 (33.53%), Postives = 87/170 (51.18%), Query Frame = 3
Query:   15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTS 524
            +IGP   G I  G  KIG   G I        ++ G +G VS+SG ++ E       V  G    I IGGD   G++  + I  F    + K ++++GE+GG  E    + +KQ K+ KP+V++++G  A    S+ + GHAGA   G   SA+ K +AL+ AG  +  S
Sbjct:  119 LIGPNCPGVITPGECKIGIMPGHI--------HKTGIIGIVSRSGTLTYEAVAQTTAVGLGQSTCIGIGGDPVNGTSFVECIEMFLQDDETKAIIMIGEIGGNAEEDAADFIKQSKIKKPIVSFIAGITA---PSDKRMGHAGAIISGGKGSAKDKLEALQSAGVTITKS 277          
The following BLAST results are available for this feature:
BLAST of EY756039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
SUCA_ORYSJ6.992e-1935.33Probable succinyl-CoA ligase [GDP-forming] subunit... [more]
SUCA2_ARATH2.034e-1834.78Succinyl-CoA ligase [GDP-forming] subunit alpha-2,... [more]
SUCA1_ARATH7.731e-1834.78Succinyl-CoA ligase [GDP-forming] subunit alpha-1,... [more]
SUCA_PIG2.249e-1734.76Succinyl-CoA ligase [GDP-forming] subunit alpha, m... [more]
SUCD_RICCN5.011e-1734.71Succinyl-CoA ligase [ADP-forming] subunit alpha OS... [more]
SUCD1_ARCFU5.011e-1733.53Succinyl-CoA ligase [ADP-forming] subunit alpha 1 ... [more]
SUCA_SCHPO5.011e-1732.28Probable succinyl-CoA ligase [GDP-forming] subunit... [more]
SUCA_BOVIN1.116e-1634.22Succinyl-CoA ligase [GDP-forming] subunit alpha, m... [more]
SUCD_RICFE1.458e-1634.12Succinyl-CoA ligase [ADP-forming] subunit alpha OS... [more]
SUCD_RICTY1.904e-1633.53Succinyl-CoA ligase [ADP-forming] subunit alpha OS... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-H07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756039 ID=EY756039; Name=EY756039; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGGTTGTTATTGGCCCAGCAACTGTTGGAGGAATTCAAGCT
GGAGCTTTTAAGATAGGTGACACAGCCGGAACCATTGATAACATCATTCA
TTGCAAACTCTACAGGCCTGGATCTGTTGGTTTTGTCTCCAAATCTGGTG
GCATGTCTAATGAACTATACAACACTATTGCTCGTGTAACAGATGGAATC
TATGAAGGTATTGCAATTGGAGGAGATGTGTTCCCTGGCTCCACTCTTTC
TGATCACATTTTGCGGTTTAACAACATCCCACAGGTTAAAATGATGGTTG
TTCTTGGTGAACTTGGAGGACGGGATGAGTACTCCCTTGTTGAAGCTCTG
AAACAGGGAAAGGTAAACAAACCTGTGGTTGCATGGGTCAGTGGAACCTG
TGCTCGACTATTCAAATCAGAAGTGCAATTTGGTCATGCTGGTGCTAAAA
GTGGTGGTGAGATGGAGTCTGCTCAGGCAAAGAATCAAGCACTAAGGGAT
GCTGGAGCTGTTGTTCCTACTTCATATGAAGCCTTTGAATCTGCAATTAA
GGAGACATTTGAGAAACTTGTTGAAGAGGGGAAGATTCCACCAGTGAAGG
AAGTTACACCACCACAAATCCCTGAGGATCTTAACACTGCCATTAAGAGT
GGGAAAGTACGGGCTCCAACTCATATTATTTCAACCATCTCTGATGACAG
AGGTGAGGAGCCATGCTATGCTGGTGTACCATGTCTTCATTGTAGAACAG
GTTATGGTGTGGGTGATGTTATTTCCCTTTGTGGTTTAACGCAGCCTTCC
CGCTACTGTACCCCATTATTGAGAATGCATATGTTATGCGCTGATCATGC
CCCTGGGTTCTGGGGCT
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