EY756039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCD_PSEAE (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Pseudomonas aeruginosa GN=sucD PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.904e-16 Identity = 65/183 (35.52%), Postives = 88/183 (48.09%), Query Frame = 3 Query: 15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKE 554 +IGP G I G KIG G I + PG VG VS+SG ++ Y + + TD G + IGGD PGS D + F PQ + +V++GE+GG E +K V KPVV++++G A K + GHAGA G +A K AL+DAG S A+ E Sbjct: 119 LIGPNCPGVITPGECKIGIMPGHI--------HLPGKVGIVSRSGTLT---YEAVKQTTDAGFGQSTCVGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAFIK-ANVTKPVVSYIAGVTAPPGK---RMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAE 286
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCD_RICPR (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia prowazekii GN=sucD PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.242e-16 Identity = 55/170 (32.35%), Postives = 85/170 (50.00%), Query Frame = 3 Query: 15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTS 524 +IGP G I G KIG G I I G +G VS+SG ++ E G + IGGD G++ D I F + K ++++GE+GG E + +KQ K+ KP+V++++G A ++ + GHAGA G SA+ K + L+ AG ++ S Sbjct: 119 LIGPNCPGVITPGECKIGIMPGHIHKI--------GDIGIVSRSGTLTYEAVAQTTAAGLGQSTCVGIGGDPVNGTSFVDCIEMFLQDDETKAIIMIGEIGGSAEEDAADFIKQSKIKKPIVSFIAGITA---PADKRMGHAGAIISGGKGSAEDKVEVLQSAGVIITRS 277
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCD_ECOLI (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli (strain K12) GN=sucD PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.242e-16 Identity = 64/182 (35.16%), Postives = 87/182 (47.80%), Query Frame = 3 Query: 15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIK 551 +IGP G I G KIG G I ++PG VG VS+SG ++ Y + + TD G + IGGD PGS D + F PQ + +V++GE+GG E +K+ V KPVV +++G A K + GHAGA G +A K AL AG S A+K Sbjct: 119 MIGPNCPGVITPGECKIGIQPGHI--------HKPGKVGIVSRSGTLT---YEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKE-HVTKPVVGYIAGVTAPKGK---RMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALK 285
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCD_ECOL6 (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli O6 GN=sucD PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.242e-16 Identity = 64/182 (35.16%), Postives = 87/182 (47.80%), Query Frame = 3 Query: 15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIK 551 +IGP G I G KIG G I ++PG VG VS+SG ++ Y + + TD G + IGGD PGS D + F PQ + +V++GE+GG E +K+ V KPVV +++G A K + GHAGA G +A K AL AG S A+K Sbjct: 119 MIGPNCPGVITPGECKIGIQPGHI--------HKPGKVGIVSRSGTLT---YEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKE-HVTKPVVGYIAGVTAPKGK---RMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALK 285
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCD_ECO57 (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli O157:H7 GN=sucD PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.242e-16 Identity = 64/182 (35.16%), Postives = 87/182 (47.80%), Query Frame = 3 Query: 15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIK 551 +IGP G I G KIG G I ++PG VG VS+SG ++ Y + + TD G + IGGD PGS D + F PQ + +V++GE+GG E +K+ V KPVV +++G A K + GHAGA G +A K AL AG S A+K Sbjct: 119 MIGPNCPGVITPGECKIGIQPGHI--------HKPGKVGIVSRSGTLT---YEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKE-HVTKPVVGYIAGVTAPKGK---RMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALK 285
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCA_HUMAN (Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Homo sapiens GN=SUCLG1 PE=1 SV=4) HSP 1 Score: 85.5001 bits (210), Expect = 4.242e-16 Identity = 64/187 (34.22%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ---GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 566 +IGP G I G KIG G I ++ G +G VS+SG ++ E + +V G + IGGD F G+ D + F N + ++++GE+GG E + E LKQ G +KPVV++++G A + + GHAGA G A+ K AL+ AG VV S + I + FEK Sbjct: 167 LIGPNCPGVINPGECKIGIMPGHI--------HKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFIDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHNSGPNSKPVVSFIAGLTAPPGR---RMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 342
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCA_DICDI (Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=scsA PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 4.242e-16 Identity = 58/170 (34.12%), Postives = 85/170 (50.00%), Query Frame = 3 Query: 15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTS 524 +IGP G I+ G KIG G I ++PG +G VS+SG ++ E V G I IGGD F G+ D + F PQ + ++++GE+GG E + L +KPVV++++G A + + GHAGA G A +K +AL+ AG V S Sbjct: 139 LIGPNCPGIIKPGECKIGIMPGHI--------HKPGKIGIVSRSGTLTYEAVAQTTAVGLGQSTCIGIGGDPFNGTNFIDCLKMFTQDPQTEGIILIGEIGGEAEEEAAQWLIDNPTDKPVVSFIAGLSAPPGR---RMGHAGAIISGGKGDANSKIEALKAAGVTVTFS 297
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: MTKB_METEA (Malate--CoA ligase subunit alpha OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=mtkB PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.242e-16 Identity = 56/187 (29.95%), Postives = 89/187 (47.59%), Query Frame = 3 Query: 6 RPVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 566 R +V+GP G I G +G G I Y PG VG +S+SG + E + + GI + IGGD GS+ DH+ F P+ + ++++GE+GG E +K+ +KPV+ +V+G A + + GHAGA +SA K + +R G V +F S + + + Sbjct: 120 RTMVVGPNCAGIISPGKSMLGIMPGHI--------YLPGKVGVISRSGTLGYEAAAQMKELGIGISTSVGIGGDPINGSSFLDHLALFEQDPETEAVLMIGEIGGPQEAEASAWIKE-NFSKPVIGFVAGLTAPKGR---RMGHAGAIISATGDSAAEKAEIMRSYGLTVAPDPGSFGSTVADVLAR 294
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCD_AQUAE (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Aquifex aeolicus GN=sucD PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.236e-16 Identity = 57/167 (34.13%), Postives = 89/167 (53.29%), Query Frame = 3 Query: 15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVV 515 ++GP G I G K+G G I ++ G +G VS+SG ++ E + + G + IGGD G T D I FN P+ + ++++GE+GG +E E +++ +V+KPV A+++G A K + GHAGA G +A+AK +AL AGA V Sbjct: 121 LVGPNCPGVITPGEAKVGIMPGHI--------FKRGKIGIVSRSGTLTYEAAYQLTKYGLGQSTAVGIGGDPVHGLTHRDVIEMFNKDPETEAILMIGEIGGTEEEEAAEYIEK-EVDKPVFAYIAGITAPPGK---RMGHAGAIIMGGKGTAKAKMEALEKAGAYV 275
BLAST of EY756039 vs. ExPASy Swiss-Prot
Match: SUCA_MOUSE (Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Mus musculus GN=Suclg1 PE=1 SV=4) HSP 1 Score: 84.7297 bits (208), Expect = 7.236e-16 Identity = 64/187 (34.22%), Postives = 93/187 (49.73%), Query Frame = 3 Query: 15 VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ---GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEK 566 +IGP G I G KIG G I ++ G +G VS+SG ++ E + +V G I IGGD F G+ D + F N P + ++++GE+GG E + LK+ G KPVV++++G A + + GHAGA G A+ K AL+ AG VV S + I + FEK Sbjct: 167 LIGPNCPGVINPGECKIGIMPGHI--------HKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCIGIGGDPFNGTDFIDCLEVFLNDPATEGIILIGEIGGHAEENAAAFLKEHNSGPKAKPVVSFIAGITAPPGR---RMGHAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEK 342 The following BLAST results are available for this feature:
BLAST of EY756039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756039 ID=EY756039; Name=EY756039; organism=Citrus sinensis; type=EST; length=867bpback to top |