EY756035

Overview
NameEY756035
Unique NameEY756035
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.371e-22
Identity = 83/246 (33.74%), Postives = 117/246 (47.56%), Query Frame = 3
Query:   63 SAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSAS----------FKVEAKGEWLPG------LASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGK---AEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQD------PIFKQYSLPSNEVGYPGG-IFNPLNFAPT-------------DXAKEXGACHGRLAMXAFLGF 683
            SAAV    +S   FLTG  G  ++ +   P+++                 AK  W+P       L  P +L+GSLPGD GFDPLGL +DP  LKWY +AEL++ RWAM  V+G+ + + ++ I       W++AG    A    S  TL   + IL  +VE +RW D  +P S + +         + ++  + E GYPGG  F+PL  A T             +  K     H RLAM A L F
Sbjct:    5 SAAVLNGLSSS--FLTG--GNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIF 240          
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.868e-21
Identity = 82/248 (33.06%), Postives = 119/248 (47.98%), Query Frame = 3
Query:   48 VTTQASAAVFRPCASKSRFLTG---SSGKLNREVALKPVSSS----ASFKVEAKGEWLPGLAS------PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGK---AEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQD------PIFKQYSLPSNEVGYPGG-IFNPLNFAPT-------------DXAKEXGACHGRLAMXAFLGF 683
            +TT ++ AV    +S   FLTG   +   L   V  +  +      A+  V  K  W+P + S      P +L+GSLPGD GFDPLGL +DP  LKWY +AEL++ RWAM  V+G+ + + ++ I       W++AG    A    S  +L   + +L  +VE +RW D  +  S + D         + ++  + E GYPGG  F+PL  A T             +  K     H RLAM A L F
Sbjct:    1 MTTTSATAVLNGLSSS--FLTGGKKTQALLGAHVTARVTTPKRFVVAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIF 240          
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.566e-19
Identity = 81/250 (32.40%), Postives = 120/250 (48.00%), Query Frame = 3
Query:   39 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPSNEVG---YPGGIFNPLNFAPTDXA----KEXGACHGRLAMXAFLGFIVQXHVTGKGHLKTSCTYL 740
            MA  T   S+  F   A K    +  +TG+     R+   KPV+SS+ +    + ++L   +  SP+YL G  PGD G+D  GL+ DPE      + E+++ RWAMLG +G + PE+  + G+      W+ AG ++ F+     ++    L H   I   W   +   G+V     ++    P  EV    YPGG F+PL  A    A    K     +GRLAM +  GF VQ  VTGKG L+    +L
Sbjct:    1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG---YRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 246          
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.045e-19
Identity = 82/255 (32.16%), Postives = 121/255 (47.45%), Query Frame = 3
Query:   39 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPSNEVG------YPGGIFNPLNFAPTDXA----KEXGACHGRLAMXAFLGFIVQXHVTGKGHLKTSCTYL 740
            MAT T   S++ F   A K    S  +TG+     R+ A K  P SS + +    + ++L   +  SP+YL G  PGD G+D  GL+ DPE      + E+++ RWAMLG +G + PE+  + G+      W+ AG ++ F+     ++    L H   I   W   +   G+V      + Y +    +G      YPGG F+PL  A    A    K     +GRLAM +  GF VQ  VTGKG L+    +L
Sbjct:    1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV------EGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248          
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.489e-19
Identity = 73/214 (34.11%), Postives = 99/214 (46.26%), Query Frame = 3
Query:  114 SSGKLNREVALKPVSSSASFKVEAKGEWLPGL---ASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPSNEVG------YPGGIFNPLNFA--PTDXA--KEXGACHGRLAMXAFLGFIVQXHVTGKG 713
            ++GK     A  P SS   F    + +WL      A+P YL G  PGD G+D  GL+ DPE  K Y + EL+++RWAMLG +G   PE+  K G       W+ AG A+ F+     ++    L H   I     ++    V    + + Y +     G      YPG  F+PL  A  P   A  K     +GRLA  +  GF VQ  VTGKG
Sbjct:   17 ATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAG-AQIFSEGGLDYLGNPSLVHAQNIVATSAVQ----VILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKG 225          
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.489e-19
Identity = 83/252 (32.94%), Postives = 121/252 (48.02%), Query Frame = 3
Query:   39 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVA--LKPVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPSNEVG---YPGGIFNPLNFAPTDXA----KEXGACHGRLAMXAFLGFIVQXHVTGKGHLKTSCTYL 740
            MA  T   S++ F   A K    S  +TG+     R+ A   KPVSSS+ +    + ++L   +  SP+YL G  PGD G+D  GL+ DPE      + E+++ RWAMLG +G + PE+  + G+      W+  G ++ F+     ++    L H   I   W   +   G+V     ++    P  EV    YPGG F+PL  A    A    K     +GRLAM +  GF VQ  VTGKG L+    +L
Sbjct:    1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGG-SQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248          
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.489e-19
Identity = 82/253 (32.41%), Postives = 118/253 (46.64%), Query Frame = 3
Query:   39 MATVTTQASAAVF-RPCASKSRFLTGSSGKLNREVALKP---VSSSASFKVEAKGEWLPGLAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPSNEVG------YPGGIFNPLNFAPTDXA----KEXGACHGRLAMXAFLGFIVQXHVTGKGHLKTSCTYL 740
            MA  T   S+ V  R   S S  L G +    R+ A KP    SS + +    +  +L  L+   P+YL G  PGD G+D  GL+ DPE      + E+++SRWAMLG +G + PE+  + G+      W+ AG ++ F+     ++    L H   I   W   +   G+V      + Y +    +G      YPGG F+PL  A    A    K     +GRLAM +  GF VQ  VTGKG L+    +L
Sbjct:    1 MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAV------EGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 246          
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.556e-19
Identity = 84/255 (32.94%), Postives = 124/255 (48.63%), Query Frame = 3
Query:   39 MATVTTQASAAVFRPCASKSRFLTGSSGKL--NREVAL-------KPVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPSNEVG---YPGGIFNPLNFAPTDXA----KEXGACHGRLAMXAFLGFIVQXHVTGKGHLKTSCTYL 740
            MA  TT  S+    P A K+  L+ SS ++  N +V +       KPVSS + +    + ++L   +  SP+YL G  PGD G+D  GL+ DPE      + E+++ RWAMLG +G + PE+  + G+      W+ AG ++ F+     ++    L H   I   W   +   G+V     ++    P  EV    YPGG F+PL  A    A    K     +GRLAM +  GF VQ  VTGKG L+    +L
Sbjct:    1 MAASTTALSS----PFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHL 247          
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.556e-19
Identity = 80/262 (30.53%), Postives = 119/262 (45.42%), Query Frame = 3
Query:   39 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGK-------AEYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPSNEVGYPGGIFNPLNFAPTDXA----KEXGACHGRLAMXAFLGFIVQXHVTGKGHLKTSCTYL 740
            MA  T   S++ F     K    S  +TG+     R+ A K  PVSS + +    + ++L   +  +P+YL G  PGD G+D  GL+ DPE      + E+++ RWAMLG +G + PE+F + G+      W  AG         +Y  + S         ++  + +L   VE   ++    P  V  DP+            YPGG F+PL  A    A    K     +GRLAM +  GF +Q  VTGKG L+    +L
Sbjct:    1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVE--GYRVAGGPLGVVVDPL------------YPGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHL 248          
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.951e-19
Identity = 83/252 (32.94%), Postives = 120/252 (47.62%), Query Frame = 3
Query:   39 MATVTTQASAAVFRPCA----SKSRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPSNEV---GYPGGIFNPLNFAPTDXA----KEXGACHGRLAMXAFLGFIVQXHVTGKGHLKTSCTYL 740
            MA  T   S++ F   A    S S  +TG+     R+   K  P SSS+ +    + ++L   +  +P+YL G  P D G+D  GL+ DPE      + E+++ RWAMLG +G + PE+F + GI      W+ AG A+ F+     ++    L H   I   W   +   G+V     ++    P  EV    YPGG F+PL  A    A    K     +GRLAM +  GF VQ  VTGKG L+    +L
Sbjct:    1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAG-AQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248          
The following BLAST results are available for this feature:
BLAST of EY756035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
CB4A_SOLLC3.371e-2233.74Chlorophyll a-b binding protein CP24 10A, chloropl... [more]
CB4B_SOLLC4.868e-2133.06Chlorophyll a-b binding protein CP24 10B, chloropl... [more]
CB22_TOBAC1.566e-1932.40Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB2G_SOLLC2.045e-1932.16Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB2_CHLRE3.489e-1934.11Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB23_NICPL3.489e-1932.94Chlorophyll a-b binding protein C, chloroplastic O... [more]
CB21_ORYSJ3.489e-1932.41Chlorophyll a-b binding protein 1, chloroplastic O... [more]
CB25_NICPL4.556e-1932.94Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB22_PETSP4.556e-1930.53Chlorophyll a-b binding protein 22L, chloroplastic... [more]
CB23_PETSP5.951e-1932.94Chlorophyll a-b binding protein 22R, chloroplastic... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-H03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756035 ID=EY756035; Name=EY756035; organism=Citrus sinensis; type=EST; length=929bp
CCACGCGTCCGCGAGGCTCATAACTCTCGTCGGGAAACATGGCAACCGTC
ACAACACAAGCCTCGGCCGCTGTGTTCCGGCCATGCGCATCCAAATCCAG
GTTCCTTACTGGGTCTTCGGGTAAATTAAATAGGGAAGTGGCCTTGAAAC
CAGTGAGCTCAAGCGCTTCTTTCAAAGTTGAAGCCAAGGGGGAGTGGTTA
CCGGGCTTGGCCTCGCCAACTTACCTCAACGGCAGCCTCCCCGGTGACAA
TGGATTTGACCCCTTGGGGCTTGCCGAGGATCCTGAGAACTTGAAGTGGT
ATGTGCAAGCCGAGCTTGTGAATTCGCGCTGGGCCATGTTGGGTGTTGTT
GGAATGTTGTTGCCCGAAGTTTTCACAAAGATTGGAATTATTAATGTTCC
TCAATGGTATGATGCTGGGAAGGCTGAGTACTTTGCATCATCATCGACCC
TTTTCGTGATCGAGTTCATCTTGTTCCACTATGTGGAGATAAGAAGATGG
CAAGACATAAAGAACCCAGGAAGTGTCAACCAAGACCCCATTTTCAAGCA
GTACAGCTTGCCNTCAAACGAAGTTGGGTACCCCGGTGGCATCTTCAACC
CACTCAACTTTGCACCCACTGATGANGCAAAGGAGAANGGAGCTTGCCAT
GGGAGATTGGCAATGNTGGCATTCTTGGGATTTATTGTTCAGCANCATGT
GACAGGCAAAGGGCATTTGAAAACCTCCTGCACATATCTCTGACCATGGC
ACACACCATCGTCCAGACACTTAGTGGTAATTTATCAAAGATGGATGGGC
ATTCGGGATCCTGTTCTTTCCTTTGTAACATGATCTGTAGTTTTTGAGGG
AGATTGACATCATTGAAACATGGAAACCTCATGGACGGGGAACTATGATG
GATTTATTTACCTTTTACCCCAAAAAAAA
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