EY756028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_THENV (50S ribosomal protein L18P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl18p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.434e-17 Identity = 68/223 (30.49%), Postives = 97/223 (43.50%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNLER 778 RY+V ++RRREG T+YR R RLI K R VVR TNK I AQ++ A GD+ + L ++G N +AAY GL+ A Y+ + E A+LD+GL + G+RVF IPH E+ + S + HVA Y L E+ PE Y++ F QRG++ ++L + Sbjct: 6 RYKVPFRRRREGLTNYRKRRRLILSRKP-------RLVVRKTNKHIIAQVVVAKPQGDVTIVGVDTRALAKFGWRGDENNTSAAYLLGLV------------AGYKARLRGVRE--------------AVLDIGLHRPVAGSRVFAVLKGALDAGLEIPHGEEVLPEDDRVSGK-------------HVAEYAAKLKEENPELYKARFSRYLQRGVQPEDLPK 182
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_METTH (50S ribosomal protein L18P OS=Methanobacterium thermoautotrophicum GN=rpl18p PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.434e-17 Identity = 69/214 (32.24%), Postives = 97/214 (45.33%), Query Frame = 2 Query: 98 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCE 739 A+ RY++ ++RRREGKTDYRAR +++ T K R VVR T + AQII+ + GD L SA++ +L + G G +N AAAY TG L +R LK EG E A+LD+GL G++VF +PH E D ++ E H+ Y +L E+E K S + E Sbjct: 2 AHGPRYKLAFRRRREGKTDYRARYKMVE-------TGKSRLVVRITTYHVIAQIINVGMNGDETLVSAHSKQLQKMGWLGGTSNTAAAYLTGYLCGKRALK--------EGIEE------------------AVLDIGLRPAIRGSKVFAALKGAVDAGLNVPHGE----SVLPDESRIRGE---------HIMEYAESLDEEELRKRFSKYLE 169
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL5_SOLME (60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.872e-17 Identity = 46/84 (54.76%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 614 SKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNLERVYXK-YMLPSVQTLPERI*EEASAEHRRY 862 SKDSKQLDAEVHRKYIY GHVAAYM LMEDEPEKYQSHF + + DN+E +Y K + P++ ++ H+RY Sbjct: 2 SKDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQKQPPKTHKRY 85
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_METHJ (50S ribosomal protein L18P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl18p PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.171e-17 Identity = 63/163 (38.65%), Postives = 81/163 (49.69%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEK 598 RY V ++RRREG+T+Y AR RL+ K R VVR TN+ I QII+A + GD +A + EL ++G E L N AAY TG+LLA R LK A EG A+LD+GL + T G RVF IPH+E+ Sbjct: 6 RYFVAFRRRREGRTNYHARTRLVVATKP-------RMVVRKTNRHIICQIITAHMEGDRTHVAANSSELRKFGYEGSLNNTPAAYLTGMLLAVRALK-----AGQEG---------------------AILDIGLHRATPGARVFAALKGAVEAGFDIPHNEE 135
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_PYRAR (50S ribosomal protein L18P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl18p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.115e-17 Identity = 68/221 (30.77%), Postives = 95/221 (42.99%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNL 772 RY+V ++RRREG T+YR R +L+ K R VVR TNK I AQI+ A GD +A A L ++G N +AAY GL++ Y+ + E A+LD+GL + T G RVF IPH E+ + I H+A Y L E+ P+ Y++ F QRG+E + L Sbjct: 6 RYKVPFRRRREGLTNYRKRRKLVISKKP-------RLVVRKTNKHIIAQIVVAKPIGDETVAGADTRILTKFGWRGDENNTSAAYLLGLVVG------------YKARMRGVEE--------------AILDIGLHRPTPGARVFAVLKGALDAGLKIPHGEEVLPSDER-------------IRGEHIAEYAAKLKEENPDAYKARFSRYLQRGLEPERL 180
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_METJA (50S ribosomal protein L18P OS=Methanocaldococcus jannaschii GN=rpl18p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16 Identity = 64/220 (29.09%), Postives = 98/220 (44.55%), Query Frame = 2 Query: 113 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNL 772 Y+VK++RRRE KTDYR R++L+ K R V R T AQI+ GD + SA++ EL + G + N +AY TG LL ++ L +G+ E A+LD+GL + T GN +F IPH E+ +++ E H+ AY L E + E+Y+ F + ++G+E + L Sbjct: 7 YRVKFRRRREAKTDYRKRLKLLLSRKP-------RLVARRTLNHCIAQIVLYDEKGDKTVVSAHSRELIKLGYKGHTGNLPSAYLTGYLLGKKALA--------KGYTE------------------AVLDIGLHRATKGNAIFAILKGALDAGMEIPHGEE----ILPSEERIRGE---------HIKAYAEMLKEQDEERYKKQFSKYLEKGLEPEKL 180
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_META3 (50S ribosomal protein L18P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl18p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.704e-16 Identity = 67/225 (29.78%), Postives = 101/225 (44.89%), Query Frame = 2 Query: 98 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNL 772 A+ +Y+V ++RRREGKT++R R++L+ TP R V R + +I AQI+ GD ++ SA++ E+ + G + N AAY TGLLL ++ LK EG+ E A+LD+GL T G V IPHSE+ G + I HV Y L ++ EKY F + + G+ ++L Sbjct: 2 AHGAKYRVPFRRRREGKTNFRLRLKLLLS-----RTP--RLVARKSLNNIVAQIVEYDEVGDKIVVSAHSKEIVKLGYKGHCGNVPAAYLTGLLLGKKALK--------EGNEE------------------AILDLGLNSATKGAAVLAILKGAVDAGMDIPHSEEILPGEDR-------------INGSHVKEYAELLKVEDEEKYNKQFSKYLKNGLNPEDL 180
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_PYRIL (50S ribosomal protein L18P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl18p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.612e-16 Identity = 63/221 (28.51%), Postives = 94/221 (42.53%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNL 772 RY+V ++RRREG T+YR R +L+ K R VVR TNK I AQ++ A GD+ + L ++G + N AAY GL++ Y+ + E A+LD+GL + G+RVF IPH E+ + S + H+A Y L ++ PE Y++ F QRG+ + L Sbjct: 6 RYKVPFRRRREGLTNYRKRRKLLLSKKP-------RLVVRKTNKHIIAQVVVAKPQGDVTIVGIDTRALAKFGWKGDENNTPAAYLLGLIVG------------YKARIRGVKE--------------AVLDIGLHRPVAGSRVFAVLKGALDAGLEIPHGEEIIPSDDRISGK-------------HIAEYAEKLKKENPELYKTRFSRYLQRGLAPEEL 180
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_METMP (50S ribosomal protein L18P OS=Methanococcus maripaludis GN=rpl18p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.289e-15 Identity = 65/221 (29.41%), Postives = 102/221 (46.15%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNL 772 +++V ++RRREGKTD+R R+ L+ K R V R + ++TAQ+++ GD+VL SA++ EL + G + N AAY TGLLL + +K ED A+LD GL + T G +F IPH +K A D ++L+ HV Y +L ED + Y+ F + ++G+ ++L Sbjct: 6 KFRVPFRRRREGKTDFRQRLGLLLSGKP-------RLVARKSLNNVTAQLMAYDEKGDVVLVSAHSKELVKMGYKGHCGNLPAAYLTGLLLGAKAVK----------------EDVK----------EAVLDKGLHRATKGAAIFAVLKGALDAGMDIPHGDKIIA----DEERLNGT---------HVKNYAESLKED-ADAYKKQFSKYLEKGLNPEDL 179
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_METM5 (50S ribosomal protein L18P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl18p PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.289e-15 Identity = 65/221 (29.41%), Postives = 103/221 (46.61%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNL 772 +++V ++RRREGKTD+R R+ L+ K R V R + ++TAQ++S GD+VL SA+ EL + G + N AAY TGLLL ++ +K EG E A+LD GL + T G +F IPH ++ A + ++L+ HV Y +L ED + Y+ F + ++G+ ++L Sbjct: 6 KFRVPFRRRREGKTDFRQRLGLLLSGKP-------RLVARKSLNNVTAQLMSYDEKGDVVLVSAHTKELVKMGYKGHCGNLPAAYLTGLLLGKKAVK--------EGAEE------------------AILDKGLHRATKGAAIFAVLKGALDAGMDIPHGDEIIA----EEERLNGT---------HVKNYAESLKED-ADAYKKQFSKYLEKGLNPEDL 179 The following BLAST results are available for this feature:
BLAST of EY756028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756028 ID=EY756028; Name=EY756028; organism=Citrus sinensis; type=EST; length=912bpback to top |