EY756028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_METVA (50S ribosomal protein L18P OS=Methanococcus vannielii GN=rpl18p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.938e-14 Identity = 66/221 (29.86%), Postives = 102/221 (46.15%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNL 772 +++V ++RRREGKTD+R R+ L+ K R V R + +I AQ+++ GDIVL SA++ EL + G + N AAY TGLLL ++ ++ EG E A+LD GL + T G +F IP E+ A D ++L+ H+ Y L EDE E Y+ F + ++G+ ++L Sbjct: 8 KHRVPFRRRREGKTDFRQRLGLLLSGKP-------RLVARKSLNNIIAQLMAYDEKGDIVLVSAHSRELVKMGYKGHCGNLPAAYLTGLLLGKKAVE--------EGLEE------------------AILDKGLHRATKGAAIFAVLKGALDAGMDIPCGEEIIA----DEERLNGT---------HIKQYAELLKEDE-EAYKKQFSKYLEKGLNPEDL 181
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_KORCO (50S ribosomal protein L18P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl18p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.531e-14 Identity = 57/161 (35.40%), Postives = 75/161 (46.58%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHS 592 RY+VK++RRREGKTDY R+ L+ K R VVR TN+ I Q I GD V+A A++ EL +YG G N AAY TG L A R A+ G E A+LD+G +T G+R++ +PHS Sbjct: 6 RYKVKFRRRREGKTDYMKRLALLKSRKP-------RVVVRRTNRYIIVQFIGFKGEGDEVIAYAFSKELEKYGWPYGGKNLPAAYLTGYLAAMR--------AKKAGVTE------------------AILDIGRFPSTKGSRLYAALKGVLDAGIDVPHS 133
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_HALMA (50S ribosomal protein L18P OS=Haloarcula marismortui GN=rpl18p PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 2.531e-14 Identity = 67/222 (30.18%), Postives = 95/222 (42.79%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKY---IYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEAD 766 RY+V +RRRE +TDY R+RL+ K R V R +NK + AQ+++ GD LASA++ +L YG E N +AY TGLL R E VE A+LD+GL T G++VF IPH++ A + + AE + +Y G A D PE HF E+ + ++ D Sbjct: 6 RYKVPMRRRREARTDYHQRLRLLKSGKP-------RLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRA---------QEAGVE-----------------EAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDA------ADLPE----HFDELRETLLDGD 184
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_IGNH4 (50S ribosomal protein L18P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl18p PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.317e-14 Identity = 65/221 (29.41%), Postives = 99/221 (44.80%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADN 769 RY+V +RRREGKT+Y R + K RFVVR +NK + Q+I + GD V+A+A++ EL +YG + + A Y TG+L A R K G Y+V D+GL K T G RVF +P + D ++ E H+A+Y +L + PE+YQ F ++ +RG++ ++ Sbjct: 6 RYKVPRRRRREGKTNYYKRYTMALSRKP-------RFVVRKSNKYVWVQVIEFAPEGDKVIAAAHSKELEKKYGWKGYGNSLPAVYLTGMLAALRAKK--------------AGIQYAVP------------DIGLHKPTKGARVFAAIKAANDVGLEVPVGD-----VVPDESRIRGE---------HIASYAESLKNENPEEYQRRFAKLLERGLKPED 179
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_METS5 (50S ribosomal protein L18P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl18p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.638e-14 Identity = 64/239 (26.78%), Postives = 99/239 (41.42%), Query Frame = 2 Query: 98 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNLERVYXKYMLPSVQT 814 A+ Y+VKY+RRREGKT+Y R + + R VVR TNK + Q + GDI +A+A++ EL ++G + N A Y TG L R K G A+ D+GL T G R+F +P D V+ + H+A Y L +++P+KY+ F RG++ +L + K +L S+++ Sbjct: 2 AHGPNYKVKYRRRREGKTNYYRRYTYVLNRSD-------RVVVRLTNKYVIVQFVKFDPKGDITVAAAHSRELMKFGWKGDENNSTACYLTGYLAGLRAKKA--------GMTSASA------------------DLGLFTPTKGARIFYVLKGVIDSGVKVPMG--------------DVGVNNDRLAGKHIAEYAKKLEQEDPDKYRGLFSRYLARGLDPKDLP-AHFKEVLNSIKS 192
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_METKA (50S ribosomal protein L18P OS=Methanopyrus kandleri GN=rpl18p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.638e-14 Identity = 65/222 (29.28%), Postives = 96/222 (43.24%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNL 772 RY+V ++RRREGKT+Y R LI D R V R T AQI+ + GD+ LASA++ EL ++G + N AAY TG L R L+ R RA++D+GL + G+RVF IPH E+ + I H+A + E++PE+Y+ F + +RG++ + L Sbjct: 9 RYRVPFRRRREGKTNYYKRRELIKADAP-------RLVARKTLNHNIAQIVDFAPHGDVTLASAHSIELRNKFGWKGHCGNTPAAYLTGYLCGLRALE--------------------------RGIERAVIDIGLHRPVRGSRVFAMLKGALDAGMDIPHGEEVLPPEDR-------------IRGEHIANLARQIKEEDPEEYERRFSKYLERGLKPEEL 184
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_THEPD (50S ribosomal protein L18P OS=Thermofilum pendens (strain Hrk 5) GN=rpl18p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.256e-13 Identity = 64/221 (28.96%), Postives = 96/221 (43.44%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNL 772 RY+V KRRREGKT+Y R +LI K R VVR ++ QI A+ GD+V+ASA+++EL +YG + N A Y G L A++ LK +G E A++D+GL + +RVF IP + G + ++ E H+A Y L E PE ++ F G++ ++L Sbjct: 6 RYRVPLKRRREGKTNYYKRRKLIISGKP-------RLVVRVLSRTAIVQIAKATPKGDVVIASAHSNELKKYGWKGYRRNTPALYLLGFLAAKKALK--------QGVTE------------------AIVDIGLHRPVKASRVFAAVKGALDAGLKIPVGD----GVLPEDDRVRGE---------HIANYAKMLKESNPELFKLRFSGYLSAGLDPESL 180
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_SULTO (50S ribosomal protein L18P OS=Sulfolobus tokodaii GN=rpl18p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.256e-13 Identity = 66/226 (29.20%), Postives = 96/226 (42.48%), Query Frame = 2 Query: 98 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNL 772 A+ Y+VKY+RRREGKT+Y R + + R VVR TNK I AQI + GD+++ +A++ EL ++G + L N AAY TG LL R LK G E A+ D+GL G+R+F IP D + I H+A+Y L + PE ++ F + +RG+ +L Sbjct: 2 AHGPNYRVKYRRRREGKTNYYKRYTYVINNTT-------RLVVRLTNKYIIAQIAKFNPKGDVIVVAAHSMELAKKFGWKGDLNNTPAAYLTGYLLGVRALK--------AGIKE------------------AVADIGLFVPVKGSRIFTAIKGAIDAGLSIPVG--------------DLGIKEDRIKGVHIASYAQKLEAENPELFKRLFSKYLERGLHPKDL 180
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_NANEQ (50S ribosomal protein L18P OS=Nanoarchaeum equitans GN=rpl18p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.256e-13 Identity = 64/225 (28.44%), Postives = 97/225 (43.11%), Query Frame = 2 Query: 98 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNL 772 A+ RY+V ++RRREGKT YR R++L+ K R VVR N +I AQ++ GD V+ + +++ L +YG + N +AY GL+ LK G+ E A+LD+G K+T GN ++ IPHSE + I H+A Y L E+E E Y+ F + G++ + L Sbjct: 2 AHGPRYRVPFRRRREGKTVYRKRLKLLLSGKP-------RLVVRRFNSNILAQLVEYDPKGDRVIFTIHSNVLKKYGWKGHRGNLPSAYLVGLIAGYEALK--------RGYKE------------------AVLDIGRYKSTKGNALYAVLKGALDAGLNIPHSETILPSEDR-------------IRGEHIANYAKMLKENE-ELYKKQFSRYLKEGLDPEQL 179
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_METMJ (50S ribosomal protein L18P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.640e-13 Identity = 54/162 (33.33%), Postives = 73/162 (45.06%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSE 595 RY V ++RR EGKTDY R+ L++ TP R VVR TN+ I Q++ + GD L +AY+ EL YG E + AAY TG+L A V+A Y A+LD+GL + G RVF +P+ E Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAGYGYEGSTASTPAAYLTGMLFA----------------VKALNAGYG----------EAILDIGLARAKPGARVFAALKGAVDAGLDVPYGE 134 The following BLAST results are available for this feature:
BLAST of EY756028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756028 ID=EY756028; Name=EY756028; organism=Citrus sinensis; type=EST; length=912bpback to top |