EY756028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_METLZ (50S ribosomal protein L18P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl18p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.640e-13 Identity = 55/145 (37.93%), Postives = 71/145 (48.97%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVF 544 RY V+++RRREG+TDY R RLI +N R VVR TN+ I Q+I+A + GD L + EL +G + L N AAY TG+L A R K A YEG + D+GL +TG RVF Sbjct: 6 RYFVQFRRRREGRTDYYQRQRLIVSGRN-------RMVVRKTNRHIIIQLIAAQMDGDYTLVHVNSRELVNFGYKGYLGNTPAAYLTGMLFAVRAQK-----AGYEG---------------------GIADIGLQVASTGARVF 117
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_METPE (50S ribosomal protein L18P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl18p PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.142e-13 Identity = 56/163 (34.36%), Postives = 77/163 (47.24%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEK 598 RY V ++RRREGKTDY R +LI ++ R VVR TN+ I Q+I A + GD L +A + EL YG + +N AAY TG+L A V+A D+ A+LD+GL + T G +VF +PH E+ Sbjct: 6 RYFVPFRRRREGKTDYYKRGKLIVAEQP-------RMVVRKTNRHIIVQMIVAEMEGDKTLVTANSAELLDYGYKGSTSNTPAAYLTGMLFA----------------VKALNADHPA----------AILDIGLNRATYGAKVFAALKGAVEAGLDVPHGEE 135
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_HALWD (50S ribosomal protein L18P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl18p PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.142e-13 Identity = 63/208 (30.29%), Postives = 87/208 (41.83%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHF 733 RY+V +RRRE +TDY R+RL+ K R V R +N+ + AQ+I+ GD +A + L YG E N +AY TG L R ++ G D A+LD+GL T GN+VF IPH+E A +S++ + H+AAY DEP Y S F Sbjct: 6 RYKVPMRRRREVRTDYHQRLRLLKSGKP-------RLVARVSNRHVRAQLITPGPDGDETHVAASSEHLSEYGWEAPTGNLPSAYLTGYLAGMRAIE--------------AGLD------------EAVLDIGLNTATPGNKVFVVQEGAIDAGVSIPHNESVLADWSRNRGE-------------HIAAYAE--QRDEP-LYNSDF 164
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_NATPD (50S ribosomal protein L18P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl18p PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.654e-13 Identity = 61/220 (27.73%), Postives = 89/220 (40.45%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMED------EPEKYQSHFCEIHQR 751 RY V +RRRE +T+Y R+RL+ K R V R +N AQ++ GD +ASA + +L +G E N AAY TGLL +R ++ G D A+LD+GL T GN+VF +PH+E FA + + H+A Y L + + + HF E+ +R Sbjct: 6 RYTVPMRRRREARTNYHQRLRLLKSGKP-------RLVARKSNNQTKAQLVVTGPQGDETVASATSADLEAFGWEAPTGNLPAAYLTGLLAGKRAIE--------------AGLD------------EAVLDIGLNTATPGNKVFAVQEGVIDAGLEVPHNEDVFADWQRTRG-------------AHIAEYAEQLEDGLYSGDFDATELPDHFDEVRER 179
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_THESM (50S ribosomal protein L18P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl18p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.773e-13 Identity = 71/238 (29.83%), Postives = 98/238 (41.18%), Query Frame = 2 Query: 98 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR-YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMED----------------EPEKYQSHFCEIHQRGIE 760 A+ RY+V ++RRREGKT+Y R+ L+ K R VVR T AQI+ + GD + SA+ EL R +G + N +AY GLL+ K LE E A+LD+GL T G+ +F +PHSE+ + G + ++ K H+A Y L ED EPEK HF E+ R IE Sbjct: 2 AHGPRYRVPFRRRREGKTNYHKRLALLKSGKP-------RLVVRKTLNHHVAQIVLYAPEGDKTVVSAHTRELMRDFGWKGHGGNTPSAYLLGLLIG---YKALEKGIE-----------------------EAILDIGLHPPTKGSSIFAVLKGAVDAGLNVPHSEEIYPG--------EERINGK-----HIAEYAKMLKEDDENYKKQFGGYLVKGLEPEKLPEHFEEVKARIIE 193
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_METBU (50S ribosomal protein L18P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl18p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.773e-13 Identity = 49/165 (29.70%), Postives = 77/165 (46.67%), Query Frame = 2 Query: 110 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRF 604 RY+V ++RRREG+TDY R+RL+ ++ R VVR + + + Q+++ GD+ L+SA + EL +YG E N AAY TGLL + L E Y +LD+G+ ++ G+RV+ +PH+ F Sbjct: 6 RYKVAFRRRREGRTDYHQRLRLLLSRED-------RVVVRKSARHMQIQLVAPDANGDVTLSSAISKELAKYGYEGSTGNTTAAYLTGLLFGYKTL----------------AEGYE----------SGVLDIGIQASSAGSRVYAALKGVVDSGLDVPHNSSVF 137
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL5_RABIT (60S ribosomal protein L5 (Fragments) OS=Oryctolagus cuniculus GN=RPL5 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 8.141e-13 Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 2 Query: 80 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKY 214 K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTP + Sbjct: 4 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPAH 48
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_SULSO (50S ribosomal protein L18P OS=Sulfolobus solfataricus GN=rpl18p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.141e-13 Identity = 63/221 (28.51%), Postives = 87/221 (39.37%), Query Frame = 2 Query: 113 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR-YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNL 772 Y+VK +RRREGKT+Y R + + RF+VR TNK + QI GDI++ASA++ EL + +G + N AAY TG L R +K R + D+GL + GNRVF IP D + I H+A Y L + + Y F QRG+ +NL Sbjct: 10 YKVKPRRRREGKTNYYKRYVYVISKQT-------RFIVRITNKYVIVQIAKIDPKGDIMIASAHSAELAKKFGWKGDENNTPAAYLTGYLAGLRAIK--------------------------RGVTECVADIGLHVPSKGNRVFYVIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENSDLYSKLFSRYLQRGLNPENL 183
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_PYRKO (50S ribosomal protein L18P OS=Pyrococcus kodakaraensis GN=rpl18p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.141e-13 Identity = 69/233 (29.61%), Postives = 103/233 (44.21%), Query Frame = 2 Query: 98 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR-YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSE-----------KRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIE 760 A+ RY+V ++RRREGKT+Y R++L+ + K R VVR T AQI+ GD L SA+ EL R +G + N +AY GLL+ + A+ G E A+LD+GL T G+ +F +PHSE + A ++K K+ D ++RK + G++ + EPEK HF E+ + IE Sbjct: 2 AHGPRYRVPFRRRREGKTNYHKRLKLL-------KSKKPRLVVRKTLNHHIAQIVVYDPKGDKTLVSAHTMELMRDFGWKGHGGNTPSAYLLGLLIGYK--------AKQAGIEE------------------AILDIGLHPPTRGSSIFAVLKGAVDAGLNVPHSEEIYPEDYRINGEHIANYAKALKEEDEALYRKQ-FSGYLVKGL------EPEKLPEHFEEVKAKIIE 194
BLAST of EY756028 vs. ExPASy Swiss-Prot
Match: RL18_THEON (50S ribosomal protein L18P OS=Thermococcus onnurineus (strain NA1) GN=rpl18p PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.814e-12 Identity = 64/226 (28.32%), Postives = 96/226 (42.48%), Query Frame = 2 Query: 98 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR-YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMXTLMEDEPEKYQSHFCEIHQRGIEADNL 772 A+ RY+V ++RRREGKT+Y R+ L+ K R VVR + AQI+ GD + SA+ EL R +G + N +AY GLL+ + K G D A+LD+GL T G+ VF +PHSE+ + + ++ E H+A Y L E++ KY+ F +G+E + L Sbjct: 2 AHGPRYRVPFRRRREGKTNYHKRLALLKSGKP-------RLVVRKSLNHHIAQIVVYDPKGDKTIVSAHTRELMRDFGWKGHGGNTPSAYLLGLLIGYKAKK--------------AGID------------EAILDIGLHPPTRGSSVFAVLKGAVDAGLNVPHSEEIY----PEDYRITGE---------HIANYAKALKEEDEGKYRKQFSSYLVKGLEPEKL 181 The following BLAST results are available for this feature:
BLAST of EY756028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756028 ID=EY756028; Name=EY756028; organism=Citrus sinensis; type=EST; length=912bpback to top |