EY756025

Overview
NameEY756025
Unique NameEY756025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8139 contig Csv1_Contig8139:569..1370. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: SSG1_ORYGL (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza glaberrima GN=WAXY PE=1 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.948e-82
Identity = 152/244 (62.30%), Postives = 183/244 (75.00%), Query Frame = 1
Query:    1 EPLD*QYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYGTXALAEMMKNGMGSDLSWKGPS*KWEETLLNLXVAGSEPXIDGEEFAPLAKE 732
            +P   +YI  KYDA+T ++AK L KEALQAE GLPVDR IP+I FIGRLEEQKG D++AAAIP  ++E+VQI++LGTGKK  EK L+ +E  YP K R V KFN PLAH+I+AGAD + +PSRFEPCGLIQL  MRYGT    ASTGGLVDTV EG TGF MG  SV+C+ V+P DV  V+ T++RA+   GT A  EM++N M  DLSWKGP+  WE  LL L VAGS P I+G+E APLAKE
Sbjct:  361 DPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVNCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKE 604          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: SSG1_SORBI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 8.796e-82
Identity = 152/244 (62.30%), Postives = 181/244 (74.18%), Query Frame = 1
Query:    1 EPLD*QYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYGTXALAEMMKNGMGSDLSWKGPS*KWEETLLNLXVAGSEPXIDGEEFAPLAKE 732
            +P   +YI VKYD ST ++AK L KEALQAEVGLPVDR IP++ FIGRLEEQKG D++AAAIP  ++E++QI++LGTGKK  E+ L   E  YP+K R V KFN  LAH I+AGAD + + SRFEPCGLIQL  MRYGT    ASTGGLVDT+ EG TGF MG  SVDC  V+P DV  V+TT++RA+   GT A  EM+KN M  DLSWKGP+  WE  LL+L VAG EP I+GEE APLAKE
Sbjct:  360 DPSKDKYIAVKYDVSTAVEAKALNKEALQAEVGLPVDRKIPLVAFIGRLEEQKGPDVMAAAIPLLMEEDIQIVLLGTGKKKFERMLMSAEEKYPDKVRAVVKFNAALAHHIMAGADLLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIIEGKTGFHMGRLSVDCNVVEPADVKKVATTLKRAIKVVGTPAYEEMVKNCMIQDLSWKGPAKNWENVLLSLGVAGGEPGIEGEEIAPLAKE 603          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.075e-79
Identity = 151/246 (61.38%), Postives = 181/246 (73.58%), Query Frame = 1
Query:    1 EPLD*QYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYGTXALAEMMKNGMGSDLSWKGPS*KWEETLLNLXVAGSEPXIDGEEFAPLAKE 732
            +P   +YI VKYD ST ++AK L KEALQAEVGLPVDRNIP++ FIGRLEEQKG D++AAAIP  ++  E+VQI++LGTGKK  E+ L   E  +P K R V KFN  LAH I+AGAD + + SRFEPCGLIQL  MRYGT    ASTGGLVDT+ EG TGF MG  SVDC  V+P DV  V+TT++RA+   GT A  EM++N M  DLSWKGP+  WE  LL+L VAG EP ++GEE APLAKE
Sbjct:  355 DPSRDKYIAVKYDVSTAVEAKALNKEALQAEVGLPVDRNIPLVAFIGRLEEQKGPDVMAAAIPQLMEMVEDVQIVLLGTGKKKFERMLMSAEEKFPGKVRAVVKFNAALAHHIMAGADVLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIIEGKTGFHMGRLSVDCNVVEPADVKKVATTLQRAIKVVGTPAYEEMVRNCMIQDLSWKGPAKNWENVLLSLGVAGGEPGVEGEEIAPLAKE 600          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: SSG1_HORVU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 6.969e-79
Identity = 147/245 (60.00%), Postives = 180/245 (73.47%), Query Frame = 1
Query:    1 EPLD*QYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYGTXALAEMMKNGMGSDLSWKGPS*KWEETLLNLXVAGSEPXIDGEEFAPLAKE 732
            +P   +++ V YD +T ++AK L KEALQAEVGLPVDR +P++ FIGRLEEQKG D++ AAIP  +KE +VQII+LGTGKK  EK L+ +E  +P K R V +FN PLAH ++AGAD + + SRFEPCGLIQL  MRYGT  + ASTGGLVDT+ EG TGF MG  SVDC  V+P DV  V+TT++RA+   GT A  EM+KN M  DLSWKGP+  WE+ LL L V GSEP I GEE APLA E
Sbjct:  354 DPTKDKFLAVNYDITTALEAKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKEEDVQIILLGTGKKKFEKLLKSMEEKFPGKVRAVVRFNAPLAHQMMAGADLLAVTSRFEPCGLIQLQGMRYGTPCVCASTGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVATTLKRAVKVVGTPAYQEMVKNCMIQDLSWKGPAKNWEDVLLELGVEGSEPGIVGEEIAPLAME 598          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: SSG1_WHEAT (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WAXY PE=1 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.824e-77
Identity = 144/245 (58.78%), Postives = 178/245 (72.65%), Query Frame = 1
Query:    1 EPLD*QYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYGTXALAEMMKNGMGSDLSWKGPS*KWEETLLNLXVAGSEPXIDGEEFAPLAKE 732
            +P+  +++ V YD +T ++ K L KEALQAEVGLPVDR +P++ FIGRLEEQKG D++ AAIP  +KE +VQI++LGTGKK  E+ L+ +E  +P K R V +FN PLAH ++AGAD + + SRFEPCGLIQL  MRYGT    ASTGGLVDT+ EG TGF MG  SVDC  V+P DV  V TT++RA+   GT A  EM+KN M  DLSWKGP+  WE+ LL L V GSEP I GEE APLA E
Sbjct:  366 DPIKDKFLTVNYDVTTALEGKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEIVKEEDVQIVLLGTGKKKFERLLKSVEEKFPTKVRAVVRFNAPLAHQMMAGADVLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIVEGKTGFHMGRLSVDCNVVEPADVKKVVTTLKRAVKVVGTPAYHEMVKNCMIQDLSWKGPAKNWEDVLLELGVEGSEPGIVGEEIAPLALE 610          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: SSY1_SOLTU (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.883e-40
Identity = 87/204 (42.65%), Postives = 128/204 (62.75%), Query Frame = 1
Query:   52 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTY--GTXALAEMMKNGMGSDLSWKGPS*KWEE 657
            +  K   K  LQ E+GLP+  + P+IGFIGRL+ QKG DI+ +AIP  ++ +VQ+++LG+G+K  E  +   E L+ +K R    FN+P++H I AG D +L+PSRFEPCGL QL+AMRYGT+PIV STGGL DTV++     Q G          P+    +  T++ A+ TY     +   +M+ GMG D SW+  + ++E+
Sbjct:  425 LSGKVQCKTDLQKELGLPIRPDCPLIGFIGRLDYQKGVDIILSAIPELMQNDVQVVMLGSGEKQYEDWMRHTENLFKDKFRAWVGFNVPVSHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPIVHSTGGLRDTVKDFNPYAQEGIGEGTGWTFSPLTSEKLLDTLKLAIGTYTEHKSSWEGLMRRGMGRDYSWENAAIQYEQ 628          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: SSY21_ORYSJ (Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-1 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 4.133e-39
Identity = 94/213 (44.13%), Postives = 126/213 (59.15%), Query Frame = 1
Query:   34 YDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYGTXALAEMMKNGMGSDLSWKGPS*KWEETLL 666
            Y   TV   K   K ALQ E+GLPV  ++PVI FIGRL+ QKG D++A A+P    ++VQ+I+LGTG++ +E  L +LE  + ++ RG   F+I LAH + AGAD +L+PSRFEPCGL QL+AM YGTVP+V + GGL DTVE    +    +G      EA   +D         R   T    +   + K GM  DLSW   +  +EE LL
Sbjct:  535 YSLETVQAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRT----SWEGLQKRGMMQDLSWDNAAKLYEEVLL 743          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: SSY2_SOLTU (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS2 PE=1 SV=3)

HSP 1 Score: 160.999 bits (406), Expect = 7.051e-39
Identity = 88/227 (38.77%), Postives = 129/227 (56.83%), Query Frame = 1
Query:   28 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYGTXALAE--------------MMKNGMGSDLSWKGPS*KWEETLL 666
            + Y   T+   KP  K ALQ E+GLPV  ++P+IGFIGRL+ QKG D++A A+P  + ++VQ+++LGTG++ +E+ L Q E  + +K RG   F++  +H I AGAD +L+PSRFEPCGL QL+AM+YGT+P+V + GGL DTV                +  DP + + +  T  RA  +    AL                +    M  DLSW   +  +EE L+
Sbjct:  551 MNYSLDTLQTGKPQCKAALQKELGLPVRDDVPLIGFIGRLDPQKGVDLIAEAVPWMMGQDVQLVMLGTGRRDLEQMLRQFECQHNDKIRGWVGFSVKTSHRITAGADILLMPSRFEPCGLNQLYAMKYGTIPVVHAVGGLRDTV----------------QPFDPFNESGLGWTFSRAEASQLIHALGNCLLTYREYKKSWEGIQTRCMTQDLSWDNAAQNYEEVLI 761          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSJ (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.203e-38
Identity = 85/204 (41.67%), Postives = 124/204 (60.78%), Query Frame = 1
Query:   52 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTY--GTXALAEMMKNGMGSDLSWKGPS*KWEE 657
            +  K   K  LQ E+GLP+  ++P+IGFIGRL+ QKG D++  AIP  +++N+Q ++LG+G    E  +   E  Y +K RG   F++P++H I AG D +L+PSRFEPCGL QL+AM+YGTVP+V  TGGL DTV E F  F          A  P+ +  +   +R A+ TY     +   +MK GM SD +W   + ++E+
Sbjct:  426 LSGKAKCKAELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTV-ENFNPFAEKGEQGTGWAFSPLTIEKMLWALRMAISTYREHKSSWEGLMKRGMSSDFTWDHAASQYEQ 628          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSI (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=OsI_021017 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.203e-38
Identity = 85/204 (41.67%), Postives = 124/204 (60.78%), Query Frame = 1
Query:   52 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTY--GTXALAEMMKNGMGSDLSWKGPS*KWEE 657
            +  K   K  LQ E+GLP+  ++P+IGFIGRL+ QKG D++  AIP  +++N+Q ++LG+G    E  +   E  Y +K RG   F++P++H I AG D +L+PSRFEPCGL QL+AM+YGTVP+V  TGGL DTV E F  F          A  P+ +  +   +R A+ TY     +   +MK GM SD +W   + ++E+
Sbjct:  426 LSGKAKCKAELQEELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTV-ENFNPFAEKGEQGTGWAFSPLTIEKMLWALRMAISTYREHKSSWEGLMKRGMSSDFTWDHAASQYEQ 628          
The following BLAST results are available for this feature:
BLAST of EY756025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
SSG1_ORYGL3.948e-8262.30Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_SORBI8.796e-8262.30Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_MAIZE1.075e-7961.38Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_HORVU6.969e-7960.00Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_WHEAT3.824e-7758.78Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSY1_SOLTU4.883e-4042.65Soluble starch synthase 1, chloroplastic/amyloplas... [more]
SSY21_ORYSJ4.133e-3944.13Soluble starch synthase 2-1, chloroplastic/amylopl... [more]
SSY2_SOLTU7.051e-3938.77Granule-bound starch synthase 2, chloroplastic/amy... [more]
SSY1_ORYSJ1.203e-3841.67Soluble starch synthase 1, chloroplastic/amyloplas... [more]
SSY1_ORYSI1.203e-3841.67Soluble starch synthase 1, chloroplastic/amyloplas... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-G05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756025 ID=EY756025; Name=EY756025; organism=Citrus sinensis; type=EST; length=801bp
GAACCCCTTGACTGACAATATATAGGTGTCAAATATGATGCTTCAACTGT
GATGGATGCGAAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGT
TGCCTGTCGATAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAA
GAGCAGAAAGGCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAA
AGAGAATGTTCAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGA
AGCAGCTTGAACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTA
GCGAAATTCAATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTT
TATTTTGATTCCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATG
CCATGCGTTATGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTT
GACACTGTGGAAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGT
TGACTGTGAGGCTGTGGATCCAGTAGATGTGGCTGCAGTGTCCACAACCG
TCAGAAGAGCTCTTGNCACCTATGGTACTNCAGCTTTGGCTGAAATGATG
AAAAATGGCATGGGCTCAGATCTTTCATGGAAAGGACCCAGCTAGAAATG
GGAGGAGACCCTACTTAACCTGNAAGTTGCTGGTAGTGAACCTGNAATTG
ACGGCGAAGAATTTGCTCCTCTTGCCAAGGAAATGTGGNCACTCCCTGAT
CGGAGCTACAAAATCTCCACTTTTATTTGGACCGCAAACATGTCCTGTAT
T
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