EY756025

Overview
NameEY756025
Unique NameEY756025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8139 contig Csv1_Contig8139:569..1370. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: GLGA_PETMO (Glycogen synthase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=glgA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.287e-28
Identity = 63/131 (48.09%), Postives = 87/131 (66.41%), Query Frame = 1
Query:   73 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 465
            K +LQ  +GL  D NI +I FIGRL EQKG D+++  +   +  ++Q ++LGTG K  E+    L  LYP+K      F++ LA  I AG+D  L+PS++EPCGL Q+++MRYGTVP+V  TGGL DTV E
Sbjct:  279 KTSLQEYLGLTKDENITLISFIGRLFEQKGIDLISKIMDLLLLNDIQFVLLGTGDKKYEEYFVTLTKLYPKKISINITFDVDLAQKIYAGSDIFLMPSKYEPCGLGQMYSMRYGTVPVVRYTGGLKDTVSE 409          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: GLGA_THICR (Glycogen synthase OS=Thiomicrospira crunogena (strain XCL-2) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.599e-28
Identity = 76/182 (41.76%), Postives = 102/182 (56.04%), Query Frame = 1
Query:  106 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYGTXAL-AEMMKNGMGSDLSW 630
            VD + PVIG +GRL  QKG D++   +P  I++ NV+ +++GTG    E QL +L   YPE+      ++  LAH + AGAD  L+PSRFEPCGL QL+++ YGT PIV STGGL DTV     E   TG   G    D          A+ +T+  AL  +       ++ KNGM  D SW
Sbjct:  301 VDADDPVIGLVGRLVPQKGIDLVLEVLPELIEQTNVRFVIVGTGDSLFEYQLTELAHQYPERLMIYIGYSESLAHKVEAGADLFLMPSRFEPCGLNQLYSLAYGTPPIVHSTGGLSDTVVNATKENLATGQATGFVFYDPSR------HALKSTILHALHLFSKKGTWQKLQKNGMRQDFSW 476          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: GLGA_LACS1 (Glycogen synthase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.599e-28
Identity = 76/198 (38.38%), Postives = 106/198 (53.54%), Query Frame = 1
Query:   73 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYG-TXALAEMMKNGMGSDLSWKGPS 642
            K ALQ E GLP  +++PVI  + RL  QKG  ++ + + + ++ +VQ+IVLGTG    E         YP+K      F++ LA  I AGAD  L+PS FEPCGL Q+ +MRYGT+PIV   GGL D+V+       EG TGF    FS             +   ++ AL  Y  + A  +++K  M  D SW+  S
Sbjct:  279 KLALQKEFGLPQRKDVPVIAMVSRLTAQKGFQLVVSEMQNLVQFDVQVIVLGTGDANFEHDFRYFADTYPDKVGAAITFDVGLAQRIYAGADMFLMPSAFEPCGLSQMISMRYGTLPIVHQIGGLQDSVQPFNPVTGEG-TGFGFHDFS----------GFYMMQEIQEALRLYAESVAWTKVVKQAMSQDFSWETAS 465          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: GLGA_DESRM (Glycogen synthase OS=Desulfotomaculum reducens (strain MI-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.599e-28
Identity = 78/225 (34.67%), Postives = 119/225 (52.89%), Query Frame = 1
Query:   19 YIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYGTXAL-AEMMKNGMGSDLSWKGPS*KWEETLLNLXVAG 684
            +I V +   TV D K + KE+LQ  + LP+  ++PV G + RL  QKG +++ + +   +  +VQ++VLG+G+K  E         YP+K      F   LAH I AG+D  L+PS FEPCGL Q+ A+RYG++PIV  TGGL DT++    +TG   G       A D         T++R +  Y    + + ++ N M  D SW   + K+++    L   G
Sbjct:  261 HICVNFSRETV-DKKHINKESLQKILCLPMRPDVPVFGMVSRLVSQKGLELIGSVLDDILALDVQLVVLGSGEKHYEDMFRSASRRYPDKVSVNIMFGNTLAHRIYAGSDIYLMPSAFEPCGLSQMIALRYGSIPIVRETGGLRDTIQPYNEYTGEGNGFSFTHFNAQD------FLYTLKRTISFYRQRNIWSIIVSNAMQCDFSWYKSAQKYQDLYKKLLFNG 478          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: GLGA_THIDA (Glycogen synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgA PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 7.313e-28
Identity = 77/216 (35.65%), Postives = 117/216 (54.17%), Query Frame = 1
Query:    1 EPLD*QYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR---NIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYGTXAL-AEMMKNGMGSDLSWK 633
            +P D  ++  +Y A  ++  K   K+AL        D      P++G +GRL EQKG D + AA+P  + E + + ++LG+G+   E++L +L   +P +      ++  LAH I AGAD  L+PSRFEPCGL Q++++RYGT+PIV  TGGL DT+ +      +   S +    D  DVA     VRRAL  Y   +L   + + GM     W+
Sbjct:  259 DPADDPHLRARYTAGRILPGKRRDKQALLERFLPAADEAALQAPLVGLVGRLVEQKGIDWVLAAMPLLLAETDARFVLLGSGQAAYEQRLTRLARQHPTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMYSLRYGTLPIVFKTGGLADTIVD-TNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWR 473          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: GLGA_SYNP6 (Glycogen synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.551e-28
Identity = 78/197 (39.59%), Postives = 114/197 (57.87%), Query Frame = 1
Query:   73 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYG-TXALAEMMKNGMGSDLSWKGPS*KWEE 657
            K ALQ E+GL V+ +  +IGF+ RL EQKG D+L   +  F+   + Q +VLGTG++  E QL +L   YP +      ++  L+  I AG+D  L+PSRFEPCG+ Q+ A+RYG+VPIV  TGGLVDTV         G+     +  +P+D   + T + RA  +Y       ++ + GM  DLSWK  +  +E+
Sbjct:  257 KLALQKEMGLEVNPDRFLIGFVARLVEQKGIDLLLQILDRFLSYSDAQFVVLGTGERYYETQLWELATRYPGRMSTYLMYDEGLSRRIYAGSDAFLVPSRFEPCGITQMLALRYGSVPIVRRTGGLVDTVFHHDPRHAEGN-GYCFDRYEPLD---LYTCLVRAWESYQYQPQWQKLQQRGMAVDLSWKQSAIAYEQ 449          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPT (Glycogen synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.551e-28
Identity = 82/216 (37.96%), Postives = 109/216 (50.46%), Query Frame = 1
Query:   22 IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYGTXALAEMMKNGMGSDLSWKGPS 642
            I   YD  ++  A+   K+ LQA  GL  +    + G I RL  QKG D+L  A+P  I    Q+ +LG+G   +E+        YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV +           TG Q    + D        + A   T  RAL      A   +  NGM +D+SWK P+
Sbjct:  264 ISATYDVESIA-ARARNKKVLQARFGLKPEPGALLYGVISRLSWQKGLDLLLQALPQLIGGGAQLALLGSGDAELEQGYAAAARKYPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMATATGVATGVQFAPVTTDAL------IKAFGKT--RALFA-DVVAWRNLQINGMTTDVSWKNPA 469          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPA (Glycogen synthase OS=Rhodopseudomonas palustris GN=glgA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.551e-28
Identity = 82/216 (37.96%), Postives = 109/216 (50.46%), Query Frame = 1
Query:   22 IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYGTXALAEMMKNGMGSDLSWKGPS 642
            I   YD  ++  A+   K+ LQA  GL  +    + G I RL  QKG D+L  A+P  I    Q+ +LG+G   +E+        YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV +           TG Q    + D        + A   T  RAL      A   +  NGM +D+SWK P+
Sbjct:  264 ISATYDVESIA-ARARNKKVLQARFGLKPEPGALLYGVISRLSWQKGLDLLLEALPQLIGGGAQLALLGSGDAELEQGYAAAARKYPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMATATGVATGVQFAPVTTDAL------IKAFGKT--RALFA-DVVAWRNLQINGMTTDVSWKNPA 469          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: GLGA_CLOBB (Glycogen synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.551e-28
Identity = 74/211 (35.07%), Postives = 112/211 (53.08%), Query Frame = 1
Query:    4 PLD*QYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTYGTXALAEMMKNGMGSDLSW 630
            P +   I   YD + + D K   K  LQ+E+GL V+ NIP+I  + RL  QKG D+L       ++ ++Q++++GTG K  E   + L+  Y  K     +F+  LAH   A +D  L+PS FEPCGL QL A+RYG++PIV  TGGL DT+     +TG   G    +  A + + +   +  +      Y     + ++KN M S+ SW
Sbjct:  257 PKNDSLINKNYDVNNIND-KYENKRNLQSELGLSVNENIPMIAMVTRLTSQKGLDLLVHISERLLQNDIQLVIVGTGDKHYEDHFKWLDYKYGNKVSANIRFDNNLAHKAYAASDMFLMPSLFEPCGLGQLIALRYGSIPIVRETGGLKDTIRAYNEYTGEGNGFSFYNYNADELLHIIEYALKI-----YYDKNKWSNLVKNAMNSNNSW 461          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: GLGA_ALKMQ (Glycogen synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=glgA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.551e-28
Identity = 74/195 (37.95%), Postives = 107/195 (54.87%), Query Frame = 1
Query:   73 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALXTY-GTXALAEMMKNGMGSDLSWK 633
            K  LQ  + L VD  IP+IG + RL EQKG D++A  +   ++E +Q++VLGTG    E+   Q  I YPE+      F+  LA  I  G+DF L+PS FEPCGL QL A+RYGTVPIV  TGGL DT++       EG  GF   +++             +  T++ A+  Y       ++++N M + + W+
Sbjct:  278 KLGLQERLNLAVDAKIPMIGMVTRLVEQKGLDLVANQLEKLMEEEIQLVVLGTGDHQYEEIFRQAAIKYPERISTNLFFDEVLAQQIYGGSDFFLMPSLFEPCGLGQLIALRYGTVPIVRETGGLKDTIQYYDEVSKEG-NGFTFTNYNAH----------DMFNTIKEAIRLYPDKRKFNKVVRNAMNTKVGWE 461          
The following BLAST results are available for this feature:
BLAST of EY756025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_PETMO4.287e-2848.09Glycogen synthase OS=Petrotoga mobilis (strain DSM... [more]
GLGA_THICR5.599e-2841.76Glycogen synthase OS=Thiomicrospira crunogena (str... [more]
GLGA_LACS15.599e-2838.38Glycogen synthase OS=Lactobacillus salivarius subs... [more]
GLGA_DESRM5.599e-2834.67Glycogen synthase OS=Desulfotomaculum reducens (st... [more]
GLGA_THIDA7.313e-2835.65Glycogen synthase OS=Thiobacillus denitrificans (s... [more]
GLGA_SYNP69.551e-2839.59Glycogen synthase OS=Synechococcus sp. (strain ATC... [more]
GLGA_RHOPT9.551e-2837.96Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_RHOPA9.551e-2837.96Glycogen synthase OS=Rhodopseudomonas palustris GN... [more]
GLGA_CLOBB9.551e-2835.07Glycogen synthase OS=Clostridium botulinum (strain... [more]
GLGA_ALKMQ9.551e-2837.95Glycogen synthase OS=Alkaliphilus metalliredigens ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-G05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756025 ID=EY756025; Name=EY756025; organism=Citrus sinensis; type=EST; length=801bp
GAACCCCTTGACTGACAATATATAGGTGTCAAATATGATGCTTCAACTGT
GATGGATGCGAAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGT
TGCCTGTCGATAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAA
GAGCAGAAAGGCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAA
AGAGAATGTTCAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGA
AGCAGCTTGAACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTA
GCGAAATTCAATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTT
TATTTTGATTCCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATG
CCATGCGTTATGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTT
GACACTGTGGAAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGT
TGACTGTGAGGCTGTGGATCCAGTAGATGTGGCTGCAGTGTCCACAACCG
TCAGAAGAGCTCTTGNCACCTATGGTACTNCAGCTTTGGCTGAAATGATG
AAAAATGGCATGGGCTCAGATCTTTCATGGAAAGGACCCAGCTAGAAATG
GGAGGAGACCCTACTTAACCTGNAAGTTGCTGGTAGTGAACCTGNAATTG
ACGGCGAAGAATTTGCTCCTCTTGCCAAGGAAATGTGGNCACTCCCTGAT
CGGAGCTACAAAATCTCCACTTTTATTTGGACCGCAAACATGTCCTGTAT
T
back to top