EY756025

Overview
NameEY756025
Unique NameEY756025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8139 contig Csv1_Contig8139:569..1370. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: GLGA_PSEAE (Glycogen synthase OS=Pseudomonas aeruginosa GN=glgA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.253e-18
Identity = 45/120 (37.50%), Postives = 72/120 (60.00%), Query Frame = 1
Query:  121 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 480
            P+   + RL +QKG D+        ++   +++ +G G+  +EK + +L   +P +      F+   A  I AG+DF+L+PSR+EPCGL QL+A  +G++PI   TGGL DT+ +G TGF
Sbjct:  326 PLFAVVSRLVQQKGIDLTLEISDALLQAGGRLVSIGRGEPNLEKAMLELARRHPGQVGVHIGFDETEARRIYAGSDFLLMPSRYEPCGLSQLYAQCFGSLPIARCTGGLADTIVDGVTGF 445          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: MOK12_SCHPO (Cell wall alpha-1,3-glucan synthase mok12 OS=Schizosaccharomyces pombe GN=mok12 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.933e-12
Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = 1
Query:   37 DASTVMDAK-PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGT-----GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL 447
            D   V++AK  LLK+  Q    L VD +  ++ F+GR   QKG D++A   P  + E NVQ+I +G      G+   EK LEQ+   +P +      F   +   + AG DF LIPSR EP GL+ +   R G + I + TGGL
Sbjct: 1436 DVDFVLEAKRKLLKKQTQEWANLDVDPSAQLLVFVGRWSHQKGIDLIADLAPKLLTEHNVQLITIGPVIDLHGQFAAEK-LEQIAKRFPTRVLCKPVFTA-VPPFLFAGTDFALIPSRDEPFGLVAVEFGRKGVLCIGSRTGGL 1577          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: MOK14_SCHPO (Cell wall alpha-1,3-glucan synthase mok14 OS=Schizosaccharomyces pombe GN=mok14 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.347e-12
Identity = 54/157 (34.39%), Postives = 77/157 (49.04%), Query Frame = 1
Query:   73 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGT-----GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDC 507
            K   Q   GL +D    ++ F+GR   QKG DILA   P  +++ N+Q+IV+G      GK   EK +  +E  YP +     +F + L   I  GADF LIPSR EP GL+ +   R G + I +  GGL +      +VE   T + +      C
Sbjct:  532 KRKAQEWAGLTIDDEADLLVFVGRWSVQKGIDILADLAPTLLEKFNIQLIVVGPLIDLYGKFAAEKFMYIME-RYPGRVFSKPEF-VHLPPFIFEGADFALIPSRDEPFGLVAVEFGRRGAICIGSRVGGLGEMPGWWYSVESSSTAYLLKQLEKSC 686          
BLAST of EY756025 vs. ExPASy Swiss-Prot
Match: AGS1_SCHPO (Cell wall alpha-1,3-glucan synthase ags1 OS=Schizosaccharomyces pombe GN=ags1 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.138e-11
Identity = 55/158 (34.81%), Postives = 75/158 (47.47%), Query Frame = 1
Query:   73 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGT-----GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCE 510
            K   Q   GL V+    ++ F+GR   QKG D++A   P  ++   VQ+I +G      GK   EK L+ L+  YP +     KF   L   I +GADF LIPSR EP GL+ +   R G + I A  GGL        +VE   T   +  F   C+
Sbjct: 1422 KRLAQEWAGLEVNEKYDLLVFVGRWSSQKGIDLIADIAPSLLESYKVQLICVGPIIDLYGKFAAEK-LDVLQKKYPTRVFSQPKFT-QLPPYIFSGADFALIPSRDEPFGLVAVEFGRKGALGIGARVGGLGQMPGWWYSVESSATPHLLKQFEQACQ 1577          
The following BLAST results are available for this feature:
BLAST of EY756025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_PSEAE5.253e-1837.50Glycogen synthase OS=Pseudomonas aeruginosa GN=glg... [more]
MOK12_SCHPO1.933e-1237.50Cell wall alpha-1,3-glucan synthase mok12 OS=Schiz... [more]
MOK14_SCHPO7.347e-1234.39Cell wall alpha-1,3-glucan synthase mok14 OS=Schiz... [more]
AGS1_SCHPO2.138e-1134.81Cell wall alpha-1,3-glucan synthase ags1 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-G05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756025 ID=EY756025; Name=EY756025; organism=Citrus sinensis; type=EST; length=801bp
GAACCCCTTGACTGACAATATATAGGTGTCAAATATGATGCTTCAACTGT
GATGGATGCGAAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGT
TGCCTGTCGATAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAA
GAGCAGAAAGGCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAA
AGAGAATGTTCAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGA
AGCAGCTTGAACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTA
GCGAAATTCAATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTT
TATTTTGATTCCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATG
CCATGCGTTATGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTT
GACACTGTGGAAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGT
TGACTGTGAGGCTGTGGATCCAGTAGATGTGGCTGCAGTGTCCACAACCG
TCAGAAGAGCTCTTGNCACCTATGGTACTNCAGCTTTGGCTGAAATGATG
AAAAATGGCATGGGCTCAGATCTTTCATGGAAAGGACCCAGCTAGAAATG
GGAGGAGACCCTACTTAACCTGNAAGTTGCTGGTAGTGAACCTGNAATTG
ACGGCGAAGAATTTGCTCCTCTTGCCAAGGAAATGTGGNCACTCCCTGAT
CGGAGCTACAAAATCTCCACTTTTATTTGGACCGCAAACATGTCCTGTAT
T
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