EY756019
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756019 vs. ExPASy Swiss-Prot
Match: COPB_CHICK (Coatomer subunit beta OS=Gallus gallus GN=COPB1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.467e-23 Identity = 60/166 (36.14%), Postives = 91/166 (54.82%), Query Frame = 1 Query: 13 SNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLR 510 +N A+A DV+ FVRE I+ LR I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++ LGE+P SE ++ K + V GTYATQSA S S PT + LR LL GDFF+ A +A TLTK+ LR Sbjct: 412 NNEAAAADVLEFVREAIQRFDNLRPLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRSLGEIPIVE-SEIKKEAGELKPEEEVTVGPV----QKLVTEMGTYATQSALSS---SRPTKKEEDRPP--LRGFLLDGDFFVAASLATTLTKIALR 567 HSP 2 Score: 40.0466 bits (92), Expect = 1.467e-23 Identity = 18/56 (32.14%), Postives = 35/56 (62.50%), Query Frame = 3 Query: 558 QALLIMVSMLQLXQSPVLPHPIDNDSFDRIVVCIRLLCNTG*YIRKIWLQSCRRAL 725 +A+L+M ++L L +S + PI +D DRI +C+++L + I+ + CR++L Sbjct: 584 EAMLLMATILHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSL 639
BLAST of EY756019 vs. ExPASy Swiss-Prot
Match: COPB_YEAST (Coatomer subunit beta OS=Saccharomyces cerevisiae GN=SEC26 PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.469e-23 Identity = 53/176 (30.11%), Postives = 93/176 (52.84%), Query Frame = 1 Query: 16 NVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEV 543 N +A +I F++E+IE P+LR +I+ ++ ++R+A+ ALWI+GEY + SE+++ I+ +GE+P SE + T + + P +L DGTYAT+SA + + +R +L+GDF+ A++A T+ KLVL+ E V ++ + Sbjct: 414 NSVAASGIIAFIKEVIEKYPQLRANILENMVQTLDKVRSAKAYRGALWIMGEYAEGESEIQHCWKHIRNSVGEVPILQ-SEIKKLTQNQEHTEENEVDATAKPTGPVILPDGTYATESAFDVKTSQKSVTDEERDSRPPIRRFVLSGDFYTAAILANTIIKLVLKFENVSKNKTVI 588 HSP 2 Score: 34.2686 bits (77), Expect = 5.469e-23 Identity = 15/37 (40.54%), Postives = 27/37 (72.97%), Query Frame = 3 Query: 558 QALLIMVSMLQLXQSPVLPHPIDNDSFDRIVVCIRLL 668 +ALLI+VS++++ QS ++ ID DS +R++ I +L Sbjct: 594 EALLILVSIVRVGQSSLVEKKIDEDSLERVMTSISIL 630
BLAST of EY756019 vs. ExPASy Swiss-Prot
Match: COPB_SCHPO (Coatomer subunit beta OS=Schizosaccharomyces pombe GN=sec26 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.263e-23 Identity = 56/164 (34.15%), Postives = 89/164 (54.27%), Query Frame = 1 Query: 25 SAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEE-GEDTDSSKKXXXXXXXXXXXXRRPAVLADGTYATQSAASETAFSPPTI-VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLR 510 SA V+ F++E++E P LR S IT+LL + ++RA ++ +WI GEYC + ++ +I+ LGE+P + E+ +D + + VL DGTYAT+SA + A S + LR+ +L+GD++L AV+A LTKLV+R Sbjct: 408 SASSVLSFIKEVMEKFPDLRSSNITKLLLSLKELRAGKIFRGVIWIAGEYCLTEDDIRVAWKSIRASLGEVPILASEEQLLKDVSNVPEDDLLIDISAPASTSRKVLPDGTYATESAVTSEALSAARLEAVKASKKPPLRTQILSGDYYLAAVLASALTKLVMR 571 HSP 2 Score: 36.1946 bits (82), Expect = 9.263e-23 Identity = 16/37 (43.24%), Postives = 27/37 (72.97%), Query Frame = 3 Query: 558 QALLIMVSMLQLXQSPVLPHPIDNDSFDRIVVCIRLL 668 +A LIM S++++ QS + + ID+DS +RI+ CIR + Sbjct: 588 EACLIMTSIIRVGQSKFVKYTIDDDSVERIMNCIRAI 624 The following BLAST results are available for this feature:
BLAST of EY756019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756019 ID=EY756019; Name=EY756019; organism=Citrus sinensis; type=EST; length=875bpback to top |