EY756016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY756016 vs. ExPASy Swiss-Prot
Match: RL6_PYRAE (50S ribosomal protein L6P OS=Pyrobaculum aerophilum GN=rpl6p PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.675e-16 Identity = 53/169 (31.36%), Postives = 94/169 (55.62%), Query Frame = 2 Query: 53 MKTILSSETMEIPEGVKVKINAK-----IIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVKDELILDGNDIELVSRSAALI 544 M+ + S E +EIP+GV V I I++V+GP G++++ FK+ + L DG ++ ++ + ++ A + T ++N+ GVT+G+RYK++ +Y HFP+ + + I NFLG K + + GV V K K++++++G D ELVS AA + Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQ-DG-----KIVMEVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPMLVKVQG--NQLVIENFLGRKSKITLNIPKGVKV--EVKGKEDIVIEGIDRELVSTFAAAV 159
BLAST of EY756016 vs. ExPASy Swiss-Prot
Match: RL6_PICTO (50S ribosomal protein L6P OS=Picrophilus torridus GN=rpl6p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.644e-14 Identity = 53/176 (30.11%), Postives = 96/176 (54.55%), Query Frame = 2 Query: 80 MEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYV 604 +++P+ V+ + ++++G G+ SR F+ + ++ +G + +KI ++ T + T S + LI GVTKG+ Y M+ + HFP+ S+ DK I + NFLGEK R +++DG V VK D + ++G D + +AA I + ++++ D R F DGI++ Sbjct: 10 IKLPDDVQATMENNELKIKGKLGEASRIFRDNYVKAYI--EGSS----VKIATSKNNKYTKGIVGTWYSETKLLIEGVTKGFEYHMKIDFTHFPMRVSV-RGDKLI-VENFLGEKSPRSAKIVDGCKV----SVKGDRITINGIDKRKIGETAANIERATYIRHFDARVFQDGIFL 173
BLAST of EY756016 vs. ExPASy Swiss-Prot
Match: RL6_THEVO (50S ribosomal protein L6P OS=Thermoplasma volcanium GN=rpl6p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.248e-14 Identity = 55/183 (30.05%), Postives = 93/183 (50.82%), Query Frame = 2 Query: 71 SETMEIPEGVKVKINAKIIEVEGPRGKLSRNFKHLNLDFHLMTDGETGKRRLKIDAWFGSRKTSAAIRTALSHVQNLITGVTKGYRYKMRFVYAHFPINASIANADKSIEIRNFLGEKKVRRVEMLDGVTVLRSDKVK-DELILDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKG 616 + +EIP+ VKV ++ ++ + KL + F N L+ D ++KI + + + T S + N++ G+ +G++Y+M+ Y+HFP+ S+ K++ I NF GE+ R E++ V VK D L L+G + V +AA I + +K D R F DGIY+ KG Sbjct: 7 ASVIEIPKDVKVGLSGTMLSMTFGNKKLEKKFAD-NYVRLLVEDN-----KIKIVKSKNNSRERGIVGTWASEISNMVKGLKEGFQYEMKIDYSHFPMRVSVKG--KTVVIENFFGERSPRTAEIVGETQV----SVKGDRLFLNGPSKKDVGETAANIERATIIKGFDPRVFQDGIYLISKG 177 The following BLAST results are available for this feature:
BLAST of EY756016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756016 ID=EY756016; Name=EY756016; organism=Citrus sinensis; type=EST; length=821bpback to top |