EY756014

Overview
NameEY756014
Unique NameEY756014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756014 vs. ExPASy Swiss-Prot
Match: GPMB_ECO55 (Probable phosphoglycerate mutase gpmB OS=Escherichia coli (strain 55989 / EAEC) GN=gpmB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.154e-14
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 3
Query:  159 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAGSVAERLAKEFKISVIYSSDLKRALKTAQTIANRCGGLKAVEDPELRERHLGDLQGLAFREAAKVCPIAYQAFLSRKTDQDIPGGGESLDQLYRRSTSALQRIAMKHIGERIVDVTHG 614
            ++ +VRHGET WN + +IQG  D  L   G +QA  VA R AKE  I+ I SSDL R  +TA+ IA  C G   + D  LRE ++G L+        +      +  ++   D  IP  GES+ +L  R  +AL+       G R + V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATR-AKELGITHIISSDLGRTRRTAEIIAQAC-GCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIP-EGESMQELSDRVNAALESCRDLPQGSRPLLVSHG 151          
BLAST of EY756014 vs. ExPASy Swiss-Prot
Match: GPMB_ECO45 (Probable phosphoglycerate mutase gpmB OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=gpmB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.154e-14
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 3
Query:  159 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAGSVAERLAKEFKISVIYSSDLKRALKTAQTIANRCGGLKAVEDPELRERHLGDLQGLAFREAAKVCPIAYQAFLSRKTDQDIPGGGESLDQLYRRSTSALQRIAMKHIGERIVDVTHG 614
            ++ +VRHGET WN + +IQG  D  L   G +QA  VA R AKE  I+ I SSDL R  +TA+ IA  C G   + D  LRE ++G L+        +      +  ++   D  IP  GES+ +L  R  +AL+       G R + V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATR-AKELGITHIISSDLGRTRRTAEIIAQAC-GCDIIFDSRLRELNMGVLETRNIDSLTEEEENWRRQLVNGTVDGRIP-EGESMQELSDRVNAALESCRDLPQGSRPLLVSHG 151          
BLAST of EY756014 vs. ExPASy Swiss-Prot
Match: GPMB_ECO24 (Probable phosphoglycerate mutase gpmB OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=gpmB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.154e-14
Identity = 56/152 (36.84%), Postives = 79/152 (51.97%), Query Frame = 3
Query:  159 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAGSVAERLAKEFKISVIYSSDLKRALKTAQTIANRCGGLKAVEDPELRERHLGDLQGLAFREAAKVCPIAYQAFLSRKTDQDIPGGGESLDQLYRRSTSALQRIAMKHIGERIVDVTHG 614
            ++ +VRHGET WN + +IQG  D  L   G +QA  VA R AKE  I+ I SSDL R  +TA+ IA  C G   + D  LRE ++G L+        +      +  ++   D  IP  GES+ +L  R  +AL+       G R + V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATR-AKELGITHIISSDLGRTRRTAEIIAQAC-GCDIIFDSRLRELNMGVLEKRHIDSLTEEEENWRRQLVNGTVDGRIP-EGESMQELSDRVNAALESCRDLPQGSRPLLVSHG 151          
BLAST of EY756014 vs. ExPASy Swiss-Prot
Match: GPMB_ENTS8 (Probable phosphoglycerate mutase gpmB OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=gpmB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.039e-13
Identity = 55/152 (36.18%), Postives = 78/152 (51.32%), Query Frame = 3
Query:  159 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAGSVAERLAKEFKISVIYSSDLKRALKTAQTIANRCGGLKAVEDPELRERHLGDLQGLAFREAAKVCPIAYQAFLSRKTDQDIPGGGESLDQLYRRSTSALQRIAMKHIGERIVDVTHG 614
            ++ +VRHGET WN + +IQG  D  L E G  QA  VA+R AK   I+ I +SDL R  +TA+ IA  C G   + DP LRE  +G L+       ++      +  ++   D  IP  GES+ ++  R   AL        G R + V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTEKGERQAMQVAQR-AKALGITHIITSDLGRTQRTAEIIAQGC-GCDVILDPRLRELDMGILERRHLDTLSEEEEGWRRQLVNGTPDGRIP-QGESMQEVSERMHGALNACLDLPPGSRPLLVSHG 151          
BLAST of EY756014 vs. ExPASy Swiss-Prot
Match: GPMB_SHIDS (Probable phosphoglycerate mutase gpmB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=gpmB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 55/152 (36.18%), Postives = 78/152 (51.32%), Query Frame = 3
Query:  159 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAGSVAERLAKEFKISVIYSSDLKRALKTAQTIANRCGGLKAVEDPELRERHLGDLQGLAFREAAKVCPIAYQAFLSRKTDQDIPGGGESLDQLYRRSTSALQRIAMKHIGERIVDVTHG 614
            ++ +VRHGET WN + +IQG  D  L   G +QA  VA R AKE  I+ I SSDL R  +T + IA  C G   + D  LRE ++G L+        +      +  ++   D  IP  GES+ +L  R  +AL+       G R + V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATR-AKELGITHIISSDLGRTRRTVEIIAQAC-GCDIIFDSRLRELNMGVLEKSHIDSLTEEEENWRRQLVNGTVDGRIP-EGESMQELSDRVNAALESCRDLPQGSRPLLVSHG 151          
BLAST of EY756014 vs. ExPASy Swiss-Prot
Match: GPMA_RHILO (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Rhizobium loti GN=gpmA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 53/162 (32.72%), Postives = 79/162 (48.77%), Query Frame = 3
Query:  162 IIVVRHGETPWNVQGKIQGHLDVELNEVGREQAGSVAERL-AKEFKISVIYSSDLKRALKTAQTIANRCG--GLKAVEDPELRERHLGDLQGLAFREAAKVCPIAYQAFLSRKTDQDIPGGGESLDQLYRRSTSALQRIAMKHI--GERIVDVTHGGVIRTL 632
            +++VRHG++ WN++    G  DV+L E G  +A +  ++L A+  K  + ++S L RA KT Q I +  G   LK + D  L ER  GDL GL   +A K      Q  + R++    P GGESL     R           H+  G  ++   HG  +R L
Sbjct:    5 LVLVRHGQSEWNLKNLFTGWRDVDLTEQGHAEAKAAGQKLKARGLKFDIAFTSALSRAQKTCQHILDAVGQSDLKTIRDQALNERDYGDLSGLNKDDARKKWG-EEQVHVWRRSYDVSPPGGESLKDTGARVWPYYLHDLQPHVLRGGTVLVAAHGNSLRAL 165          
BLAST of EY756014 vs. ExPASy Swiss-Prot
Match: GPMB_SALCH (Probable phosphoglycerate mutase gpmB OS=Salmonella choleraesuis GN=gpmB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.543e-13
Identity = 55/152 (36.18%), Postives = 76/152 (50.00%), Query Frame = 3
Query:  159 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAGSVAERLAKEFKISVIYSSDLKRALKTAQTIANRCGGLKAVEDPELRERHLGDLQGLAFREAAKVCPIAYQAFLSRKTDQDIPGGGESLDQLYRRSTSALQRIAMKHIGERIVDVTHG 614
            ++ +VRHGET WN + +IQG  D  L   G +QA  V ER A+   I+ I SSDL R  +TA+ IA  C G     D  LRE  +G L+        +      +  ++   D  IP GGES+ +L  R  +AL        G R + V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVGER-ARSLSITHIISSDLGRTKRTAEIIAQAC-GCDITFDSRLRELDMGVLEKRQIDSLTEEEEGWRRQLVNGTQDGRIP-GGESMQELSDRVHAALASCLELPQGSRPLLVSHG 151          
BLAST of EY756014 vs. ExPASy Swiss-Prot
Match: GPMB_ERWT9 (Probable phosphoglycerate mutase gpmB OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=gpmB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.543e-13
Identity = 52/158 (32.91%), Postives = 81/158 (51.27%), Query Frame = 3
Query:  159 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAGSVAERLAKEFKISVIYSSDLKRALKTAQTIANRCGGLKAVEDPELRERHLGDLQGLAFREAAKVCPIAYQAFLSRKTDQDIPGGGESLDQLYRRSTSALQRIAMKHIGERIVDVTHGGVIRTL 632
            ++ +VRHGET WN   +IQG  D  L E G +QA  V +R+ ++  I+ + +SDL R  +TA+ IA+ C G   V DP LRE ++G L+       +       +A +    +  IP  GES+ ++ +R   AL          R + V+HG  +  L
Sbjct:    3 QVYLVRHGETLWNAARRIQGQSDSALTEKGEQQAYQVGQRV-RDLGITHVIASDLGRTRRTAEIIADAC-GCSVVLDPRLRELNMGVLEQRKLDSLSAEEESWRKALVDGTENGRIP-QGESMSEMAQRMRQALDACLSLPENSRPLIVSHGMALGVL 157          
BLAST of EY756014 vs. ExPASy Swiss-Prot
Match: GPMB_ENT38 (Probable phosphoglycerate mutase gpmB OS=Enterobacter sp. (strain 638) GN=gpmB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.933e-13
Identity = 55/152 (36.18%), Postives = 78/152 (51.32%), Query Frame = 3
Query:  159 EIIVVRHGETPWNVQGKIQGHLDVELNEVGREQAGSVAERLAKEFKISVIYSSDLKRALKTAQTIANRCGGLKAVEDPELRERHLGDLQGLAFREAAKVCPIAYQAFLSRKTDQDIPGGGESLDQLYRRSTSALQRIAMKHIGERIVDVTHG 614
            ++ +VRHGET WN + +IQG  D  L   G +QA  VAER A+   I+ I +SDL R  +TA+ IA+ C G   + DP LRE  +G L+               +  ++   D  IP  GES+ +L  R  +AL        G R + V+HG
Sbjct:    3 QVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQARQVAER-ARTLGITHIIASDLGRTQQTARIIADAC-GCDIILDPRLRELDMGVLEKRHVDSLTDEEEGWRRTLVNGTEDGRIP-DGESMQELSVRVQAALADCLKLPEGSRPLLVSHG 151          
BLAST of EY756014 vs. ExPASy Swiss-Prot
Match: GPMA_OCHA4 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=gpmA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.933e-13
Identity = 53/162 (32.72%), Postives = 78/162 (48.15%), Query Frame = 3
Query:  162 IIVVRHGETPWNVQGKIQGHLDVELNEVGREQAGSVAERL-AKEFKISVIYSSDLKRALKTAQTIANRCG--GLKAVEDPELRERHLGDLQGLAFREAAKVCPIAYQAFLSRKTDQDIPGGGESLDQLYRRSTSALQRIAMKHI--GERIVDVTHGGVIRTL 632
            +++VRHG++ WN++    G  D  L E G  +A +  +RL A   K  + Y+S L RA  T Q I ++ G   LK + D  L ER  GDL GL  ++ A+      Q  + R++    P GGESL     R           H+  GE ++   HG  +R L
Sbjct:    5 LVLVRHGQSEWNLKNLFTGWRDPGLTEQGHAEAKAAGQRLKAAGLKFDIAYTSALSRAQVTCQHILDQLGQSDLKTIRDQALNERDYGDLSGLN-KDDARAKWGEEQVHIWRRSYDVPPPGGESLKDTGARVWPYYLHTVQPHVLRGETVLVAAHGNSLRAL 165          
The following BLAST results are available for this feature:
BLAST of EY756014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
GPMB_ECO559.154e-1436.84Probable phosphoglycerate mutase gpmB OS=Escherich... [more]
GPMB_ECO459.154e-1436.84Probable phosphoglycerate mutase gpmB OS=Escherich... [more]
GPMB_ECO249.154e-1436.84Probable phosphoglycerate mutase gpmB OS=Escherich... [more]
GPMB_ENTS82.039e-1336.18Probable phosphoglycerate mutase gpmB OS=Enterobac... [more]
GPMB_SHIDS2.663e-1336.18Probable phosphoglycerate mutase gpmB OS=Shigella ... [more]
GPMA_RHILO2.663e-1332.722,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
GPMB_SALCH4.543e-1336.18Probable phosphoglycerate mutase gpmB OS=Salmonell... [more]
GPMB_ERWT94.543e-1332.91Probable phosphoglycerate mutase gpmB OS=Erwinia t... [more]
GPMB_ENT385.933e-1336.18Probable phosphoglycerate mutase gpmB OS=Enterobac... [more]
GPMA_OCHA45.933e-1332.722,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756014 ID=EY756014; Name=EY756014; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGATTCTTGCATGCGCAAAAATCCCAAAACATTTTTGCGCG
GAATCGGAACGGATTCAGAGGCACTCAAAACCCGGGAACATGGGCGAGTC
AACGGAGTCTCCAGCAGTCATGAACGGCAGCTCTGCCTCTGTTGGGCCTG
ATTATTGTGAGATCATTGTGGTGCGTCACGGTGAAACGCCTTGGAACGTT
CAAGGAAAAATTCAAGGGCATTTAGATGTTGAATTGAATGAAGTTGGAAG
AGAGCAAGCTGGTTCTGTGGCTGAGCGGCTGGCTAAGGAATTTAAAATTT
CTGTTATCTATTCTTCTGACCTGAAGCGAGCACTCAAAACCGCACAGACA
ATTGCAAACAGATGTGGCGGGCTAAAGGCCGTTGAAGATCCTGAACTAAG
GGAAAGACATCTTGGAGATCTTCAAGGCCTTGCTTTCCGTGAAGCAGCCA
AAGTCTGTCCTATAGCATATCAAGCATTTTTATCTCGCAAGACAGATCAA
GATATCCCTGGTGGCGGAGAAAGTCTTGATCAACTTTATCGACGGAGCAC
GTCTGCATTGCAGAGAATTGCTATGAAGCATATAGGAGAGCGAATAGTAG
ATGTGACTCATGGTGGCGTAATCAGAACACTCTACCAACGGGCTTGCCCA
AACGACAAGCCTGAAAGTAAGGTCCTGAATACATCTATCAACATATGTAC
GTTGACTGAGAACACTAGTGGGTCTTAGAACCTGGGGCGATGCAGTCATC
TCATCAAACACGATTTCTAAAGTCTGGTTTGGGTGGGACTCAACTCTAGN
TAGGTCTGCGCGGTGCTTCGATGTGGCTACTGCTGCATTANTATTTCAGA
CATGTGATGCTGAAATATCTTCGATTTTGCATTTC
back to top