EY755990

Overview
NameEY755990
Unique NameEY755990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY755990_ssr711 microsatellite EY755990_ssr711:711..725. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.619e-11
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 3
Query:   54 GYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 371
            G+S    + AEI+ T + +  +  ATD +        P  APL IG A+ +++L +IPIT T +NPARS   A+  N   A +  W FWV P IG  +    ++ +
Sbjct:  128 GFSLQSAIVAEIVLTAIFLIVIIGATDRRAP------PGFAPLAIGLALVLINLISIPITNTSVNPARSTAVAIFQN-TWALEQLWFFWVMPIIGGIVGGGIYRLL 226          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11
Identity = 38/112 (33.93%), Postives = 59/112 (52.68%), Query Frame = 3
Query:   39 NELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            N L  G S G     EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARS   A++    + + + W++WVGP IGA + +  + F+L
Sbjct:  119 NTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPVIGAGLGSLLYDFLL 223          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11
Identity = 38/112 (33.93%), Postives = 59/112 (52.68%), Query Frame = 3
Query:   39 NELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            N L  G S G     EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARS   A++    + + + W++WVGP IGA + +  + F+L
Sbjct:  119 NTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPVIGAGLGSLLYDFLL 223          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.467e-11
Identity = 37/112 (33.04%), Postives = 58/112 (51.79%), Query Frame = 3
Query:   39 NELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            N L  G S G     EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARS   A++    + + + W++WVGP IG  + +  + F+L
Sbjct:  117 NTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFSNHWVYWVGPIIGGGLGSLLYDFLL 221          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.467e-11
Identity = 40/112 (35.71%), Postives = 57/112 (50.89%), Query Frame = 3
Query:   39 NELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            N L  G S G     EI  T   V  +F+  D +R+ R   V     L IGF++ + HL  +  TG  +NPARS   AV+    + + + W++WVGP IG A+    + FIL
Sbjct:  119 NTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVS----LAIGFSLTLGHLFGLYYTGASMNPARSFAPAVL---TRNFTNHWVYWVGPIIGGALGGLVYDFIL 223          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.467e-11
Identity = 37/112 (33.04%), Postives = 58/112 (51.79%), Query Frame = 3
Query:   39 NELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            N L  G S G     EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARS   A++    + + + W++WVGP IG  + +  + F+L
Sbjct:  119 NTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFSNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.834e-11
Identity = 37/112 (33.04%), Postives = 58/112 (51.79%), Query Frame = 3
Query:   39 NELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            N L  G S G     EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARS   A++    + + + W++WVGP IG  + +  + F+L
Sbjct:  119 NTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.951e-11
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 3
Query:   54 GYSTGVGLAA-EIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 374
            G  TG G +  E +  FVLVYTVF+A+DP+R      +P+ + P+ IGF      LA  P +G  +NPA + G+A++Y   K   +Q ++WVGP +G A AA  +  ++
Sbjct:  139 GEMTGFGASVLEGVLAFVLVYTVFTASDPRRG-----LPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFK---NQAVYWVGPLLGGATAALVYDNVV 239          
BLAST of EY755990 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.951e-11
Identity = 40/107 (37.38%), Postives = 57/107 (53.27%), Query Frame = 3
Query:   54 GYSTGVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 371
            G S    L  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    L      G  +NPA S G A++      W  QW++WVGP IG  +A   ++ +
Sbjct:  137 GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWEWGYQWVYWVGPLIGGGLAGVIYELL 236          
The following BLAST results are available for this feature:
BLAST of EY755990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
AQPZ_PHOLL2.619e-1134.91Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
MIP_SHEEP3.420e-1133.93Lens fiber major intrinsic protein OS=Ovis aries G... [more]
MIP_BOVIN3.420e-1133.93Lens fiber major intrinsic protein OS=Bos taurus G... [more]
MIP_RAT4.467e-1133.04Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_RANPI4.467e-1135.71Lens fiber major intrinsic protein OS=Rana pipiens... [more]
MIP_MOUSE4.467e-1133.04Lens fiber major intrinsic protein OS=Mus musculus... [more]
MIP_CANFA5.834e-1133.04Lens fiber major intrinsic protein OS=Canis famili... [more]
TIP51_ARATH9.951e-1138.53Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]
TIP11_MAIZE9.951e-1137.38Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755990 ID=EY755990; Name=EY755990; organism=Citrus sinensis; type=EST; length=913bp
CCACGCGTCCGTACTACACAATGCACGGAGGTGGGGCCAACGAGCTGGCC
GATGGGTACAGCACAGGCGTTGGATTGGCCGCCGAGATCATCGGCACCTT
TGTGTTGGTTTACACTGTCTTCTCGGCCACTGATCCCAAGAGAAGCGCCA
GAGACTCCCATGTCCCCGTTTTGGCACCGCTCCCCATTGGATTTGCTGTG
TTCATGGTACACTTGGCCACAATCCCAATCACTGGCACTGGCATTAACCC
AGCAAGGAGTCTCGGGGCCGCTGTTATTTACAACAAGGACAAGGCTTGGG
ATGATCAATGGCTCTTCTGGGTTGGACCCTTCATCGGTGCAGCAATTGCG
GCTTTCTACCACCAATTCATCTTGAGAGCTGGAGCTGTCAAGGCTCTTGG
TTCATTCAGGAGCCAATCCCGTGTCTGATTTTAGTTTCGACAAGTGGATT
ATCCACATCTTCATGGGGTTAATGATTTAAAATTGGAAAGAAAAAACTGG
GAAGGAGTAGAGGTGTGTTAAGTTTCAAAAAGTGAATAATGAGGGGGGGT
GTGATTTGTGCTTTCAAGGAGTTGTAGGCAAAAAGTCTCTTAGACAATGA
GGGGGCTTGCTTTTTTGTAATCCCCTCTGTTGTTTTCAAGCACTTTCCTT
AGAATTCACTTCTTCAATGTTTCTGTCTCTTTCTACTTTGTATTATTTTC
TCCGNATGTGATTATTATTATTATTGTTGTGCTTTTAGGAAAAAAAAAAA
TATTACCTATGTTGTCATTTTAACAANCCAACCACCCACCTACACCTCTC
CATCACAACTATAACCACCTTTTACACACCTTTACCACACACCACTCTTC
TCTTCCCCCCCTTCCCACCCTTTACCTCTCAAGAGGGGGCCCCCTCTAAG
AGACCCCTCTCCC
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