EY755978

Overview
NameEY755978
Unique NameEY755978
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10693 contig Csv1_Contig10693:1003..1796. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755978 vs. ExPASy Swiss-Prot
Match: MAN1_ARATH (Mannan endo-1,4-beta-mannosidase 1 OS=Arabidopsis thaliana GN=MAN1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.098e-23
Identity = 53/130 (40.77%), Postives = 78/130 (60.00%), Query Frame = 1
Query:   25 ATVHSYPDQWL--SSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRDGYEIVLSQSP-STANVITQQAHKLYQIR 405
            AT+H YPD WL   SS   +Q +F++ W+  HI+D ++I++KP+L+ EFGKS K PG+S  +R+  F  VY  IY SA+        +FWQL T       DGYE+ +   P +TA +I  Q+ KL  ++
Sbjct:  272 ATIHIYPDSWLPLQSSRTGEQDTFVDRWIGAHIEDCDNIIKKPLLITEFGKSSKYPGFSLEKRNKFFQRVYDVIYDSARAGGSCTGGVFWQLTTNRTGLLGDGYEVFMQAGPNTTAQLIADQSSKLKNLK 401          
BLAST of EY755978 vs. ExPASy Swiss-Prot
Match: MAN4_ARATH (Putative mannan endo-1,4-beta-mannosidase 4 OS=Arabidopsis thaliana GN=MAN4 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.656e-22
Identity = 48/123 (39.02%), Postives = 75/123 (60.98%), Query Frame = 1
Query:   25 ATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKL 393
            A++H   D W    +   +L+F+  WL+ HI+DA++IL+KP++LAEFG     P Y+   RD +F T Y  IY+SA++       LFW++++EGM  F     I+LS   ST N+I++ A K+
Sbjct:  277 ASMHCGSDLWFQRLDQNSRLAFIKRWLEGHIEDAQNILKKPVILAEFGLGSDTPRYTLANRDGVFTTTYDIIYASAQKGGSAAGALFWEVISEGMSNFAGPSSIILSDKSSTVNIISEHARKM 399          
BLAST of EY755978 vs. ExPASy Swiss-Prot
Match: MAN6_ORYSJ (Mannan endo-1,4-beta-mannosidase 6 OS=Oryza sativa subsp. japonica GN=MAN6 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.531e-22
Identity = 48/128 (37.50%), Postives = 78/128 (60.94%), Query Frame = 1
Query:   25 ATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDP--GYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKLYQI 402
            A+VH+YPD WL  ++  +++ +L+NW+D+H+ D+E IL+KP+L  E G  +       ST  RD++   VY KIY SA++       L WQL+ EG   + D + +V    PST ++IT Q+ +L ++
Sbjct:  299 ASVHAYPDSWLPRASLEEKVRYLSNWVDSHLNDSEQILKKPVLFTEVGYLQHSDANSNSTVDRDIILRIVYDKIYDSARKLQAGSGALIWQLMVEGTHMYGDNFSVVARDRPSTYSLITNQSCRLQRL 426          
BLAST of EY755978 vs. ExPASy Swiss-Prot
Match: MAN6_ARATH (Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis thaliana GN=MAN6 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.917e-22
Identity = 48/130 (36.92%), Postives = 77/130 (59.23%), Query Frame = 1
Query:    4 RVRGIVPATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKL 393
            +V GI  A+VH YPD W+S +     L F ++W+  H++DAE  L  P+L  EFG S  DPG++T  RD+M NTVY    +S ++       L WQ+  +G +   DGY + L+++ + + +I+ Q+ +L
Sbjct:  287 QVLGIDFASVHVYPDSWISPAVSNSFLEFTSSWMQAHVEDAEMYLGMPVLFTEFGVSAHDPGFNTSFRDMMLNTVYKMTLNSTRKGGAGAGSLVWQVFPQGAEFMDDGYAVYLTRAHTASKIISLQSKRL 416          
BLAST of EY755978 vs. ExPASy Swiss-Prot
Match: MAN2_ARATH (Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis thaliana GN=MAN2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.234e-20
Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 1
Query:   25 ATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKLYQI 402
            A+VH YPD W       ++L F+  W+ +HI+D +  L+KP+L  EFG S  +  Y   QRD  + T++  IY SAKR       L WQ L EGM+ F D + IV  +  S   ++ +Q+ +L +I
Sbjct:  290 ASVHIYPDHWFHDQGFEEKLKFVVKWMLSHIEDGDKELKKPVLFTEFGLSNLNKDYDPSQRDRFYRTIFDVIYKSAKRKRSGAGTLVWQFLIEGMEGFNDDFGIVPWEQDSIQRLMIEQSCRLSRI 415          
BLAST of EY755978 vs. ExPASy Swiss-Prot
Match: MAN3_ORYSJ (Mannan endo-1,4-beta-mannosidase 3 OS=Oryza sativa subsp. japonica GN=MAN3 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.234e-19
Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 1
Query:    4 RVRGIVPATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSR-KDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTE-----GMDAFRDGYEIVLSQSPSTANVITQQAHKL 393
            R  G+  AT+H YPD WL  S   +Q +F  NW  +H+ D    L KP+L+ E+GK   K  G +  QR+   + V   IY+SA R        FWQLL +     GMD  RDGYEI+L++    A++I + + +L
Sbjct:  269 RAAGVDFATIHLYPDVWLWGSTADEQAAFFRNWTRSHVHDTAAFLGKPLLVTEYGKFLWKGGGANKTQRNYFLDVVLDAIYASASRGGPLVGGAFWQLLLDDDVVAGMDDLRDGYEIILAEDSRAASIIGEHSEQL 404          
BLAST of EY755978 vs. ExPASy Swiss-Prot
Match: MAN5_ARATH (Mannan endo-1,4-beta-mannosidase 5 OS=Arabidopsis thaliana GN=MAN5 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.105e-19
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 1
Query:   25 ATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRDGYEIVLSQSPSTANVITQQAHKLYQI 402
            A+VH YPD W  +    ++L F+  W+ +HI+D    L+KP+L  EFG S ++  Y   QRD  +  ++  +Y SAKR       L WQL  EGM+ F D + IV  +  S   ++ +Q+ +L ++
Sbjct:  289 ASVHIYPDHWFHNQTFEEKLKFVVKWMQSHIEDGLKELKKPVLFTEFGLSNQNKDYEPSQRDKFYRIIFDVVYKSAKRKKSGAGTLVWQLFMEGMETFNDDFGIVPHEQDSIYKLMIEQSCRLGKV 414          
BLAST of EY755978 vs. ExPASy Swiss-Prot
Match: MAN4_ORYSJ (Mannan endo-1,4-beta-mannosidase 4 OS=Oryza sativa subsp. japonica GN=MAN4 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.184e-18
Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 1
Query:   25 ATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSR-KDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTE-----GMDAFRDGYEIVLSQSPSTANVITQQAHKL 393
            AT+H YPD WL  S+  +Q +F  NW  +HI      L  P+L+ E+GK   K+ G +  QR+   + V   IY+SA R        FWQLL +     GMD+ RDGYEI+L++    A++I + + +L
Sbjct:  269 ATIHLYPDVWLWGSSADEQATFFRNWTRSHIDATAAYLGMPLLVTEYGKFLWKEVGANKAQRNYFLDLVLDAIYASASRGGPLVGGAFWQLLLDGDIVAGMDSLRDGYEIILAEDSRAASIIGEHSEQL 397          
BLAST of EY755978 vs. ExPASy Swiss-Prot
Match: MAN8_ORYSJ (Mannan endo-1,4-beta-mannosidase 8 OS=Oryza sativa subsp. japonica GN=MAN8 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17
Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = 1
Query:   13 GIVPATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRDGYEIVLSQSPSTANVI 372
            GI  A++H Y D WL  S   + L F++ W+  HI DA ++L  PI++ EFG S KD  +    R+    TVY    SS K        L WQL  EG +   DGY ++ ++SPST +++
Sbjct:  244 GIDLASIHVYSDTWLPHSIKENHLQFVDKWMQQHIHDAANLLGMPIVVGEFGVSVKDGKFGNEFREDFMKTVYRIFLSSWKEGVIGGGCLLWQLFPEGAEHMDDGYAVIFAKSPSTLSLL 363          
BLAST of EY755978 vs. ExPASy Swiss-Prot
Match: MAN7_ORYSJ (Mannan endo-1,4-beta-mannosidase 7 OS=Oryza sativa subsp. japonica GN=MAN7 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17
Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = 1
Query:   13 GIVPATVHSYPDQWLSSSNDRDQLSFLNNWLDTHIQDAEHILRKPILLAEFGKSRKDPGYSTYQRDVMFNTVYYKIYSSAKRXXXXXXXLFWQLLTEGMDAFRDGYEIVLSQSPSTANVI 372
            GI  A++H Y D WL  S   + L F++ W+  HI DA ++L  PI++ EFG S KD  +    R+    T+Y    SS K        L WQL  EG +   DGY ++ ++SPST +++
Sbjct:  251 GIDLASIHVYSDIWLPQSIKENHLQFVDKWMQQHIDDAANLLGMPIVVGEFGVSVKDGKFGNEFREDFMKTIYRIFLSSWKEGVIGGGCLLWQLFPEGAEHMDDGYAVIFAKSPSTLSLL 370          
The following BLAST results are available for this feature:
BLAST of EY755978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
MAN1_ARATH4.098e-2340.77Mannan endo-1,4-beta-mannosidase 1 OS=Arabidopsis ... [more]
MAN4_ARATH2.656e-2239.02Putative mannan endo-1,4-beta-mannosidase 4 OS=Ara... [more]
MAN6_ORYSJ4.531e-2237.50Mannan endo-1,4-beta-mannosidase 6 OS=Oryza sativa... [more]
MAN6_ARATH5.917e-2236.92Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis ... [more]
MAN2_ARATH7.234e-2037.30Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis ... [more]
MAN3_ORYSJ1.234e-1938.24Mannan endo-1,4-beta-mannosidase 3 OS=Oryza sativa... [more]
MAN5_ARATH2.105e-1934.92Mannan endo-1,4-beta-mannosidase 5 OS=Arabidopsis ... [more]
MAN4_ORYSJ5.184e-1837.98Mannan endo-1,4-beta-mannosidase 4 OS=Oryza sativa... [more]
MAN8_ORYSJ1.155e-1737.50Mannan endo-1,4-beta-mannosidase 8 OS=Oryza sativa... [more]
MAN7_ORYSJ1.970e-1736.67Mannan endo-1,4-beta-mannosidase 7 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-B10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755978 ID=EY755978; Name=EY755978; organism=Citrus sinensis; type=EST; length=795bp
CCACGCGTCCGGGGCATTGTTCCCGCAACAGTTCATTCCTACCCTGATCA
ATGGTTATCAAGCTCAAATGATCGAGATCAACTTTCTTTCTTGAACAACT
GGCTCGACACACACATCCAAGATGCTGAGCACATTCTTCGGAAGCCAATA
CTCCTAGCAGAATTCGGGAAATCGCGGAAAGATCCTGGTTATAGCACCTA
CCAGAGAGATGTAATGTTTAATACCGTGTACTACAAGATTTATTCTTCGG
CTAAAAGAGGAGGTGCAGCAGCTGGAGGCCTGTTTTGGCAACTTCTGACT
GAAGGAATGGACGCTTTTCGAGATGGTTATGAGATAGTTTTGAGCCAAAG
CCCCTCGACTGCAAATGTTATTACTCAACAGGCTCACAAGTTGTACCAAA
TTCGTAAGATTTTCGCAAGAATGAGAAATGTTGAGAGGCGGAAGAGGTCC
AGGGGCATGAGGAGACGTCAGAGGCAGGGTGGAAACAGGGGAAGGCGCAT
AGGAAACTGAAAATATGTATTTGCTTGAACGAAATGAGACCCGGGTTGTA
TCAGCGCGTGTTGCTATCAACTTAAACGGATAGTCAGTCAGGTTTAGGGA
TAGCAACTGGATCGCTCCATAATAGATATCCATAATATTCATTTAATTAG
ATCGGATAATATTCATCTAAAAATTTTTAGATTTTGAAATGGATATTTTA
AAATTATATCCAGATGGATATGGATGGATATGGATAATTATTTTTACCTA
ATGGATATCCCGTTAACCCCAAAAAAAAAAAAAAANNANANNNNN
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