EY755974

Overview
NameEY755974
Unique NameEY755974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY755974_ssr332 microsatellite EY755974_ssr332:332..343. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10133 contig Csv1_Contig10133:1..680. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY755974 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPAL (Ubiquitin OS=Lupinus albus PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:   53 MQIFVKTLTGKTTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 280
            MQIFVKTLTGKT TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY755974 vs. ExPASy Swiss-Prot
Match: UBIQ_LINUS (Ubiquitin OS=Linum usitatissimum PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:   53 MQIFVKTLTGKTTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 280
            MQIFVKTLTGKT TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY755974 vs. ExPASy Swiss-Prot
Match: UBIQ_HORVU (Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:   53 MQIFVKTLTGKTTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 280
            MQIFVKTLTGKT TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY755974 vs. ExPASy Swiss-Prot
Match: UBIQ_HELAN (Ubiquitin OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:   53 MQIFVKTLTGKTTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 280
            MQIFVKTLTGKT TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY755974 vs. ExPASy Swiss-Prot
Match: UBIQ_DESAN (Ubiquitin OS=Deschampsia antarctica PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:   53 MQIFVKTLTGKTTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 280
            MQIFVKTLTGKT TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY755974 vs. ExPASy Swiss-Prot
Match: UBIQ_DAUCA (Ubiquitin OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:   53 MQIFVKTLTGKTTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 280
            MQIFVKTLTGKT TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY755974 vs. ExPASy Swiss-Prot
Match: UBIQ_BRARA (Ubiquitin OS=Brassica rapa PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:   53 MQIFVKTLTGKTTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 280
            MQIFVKTLTGKT TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY755974 vs. ExPASy Swiss-Prot
Match: UBIQ_AVESA (Ubiquitin OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:   53 MQIFVKTLTGKTTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 280
            MQIFVKTLTGKT TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY755974 vs. ExPASy Swiss-Prot
Match: UBIQ_AVEFA (Ubiquitin OS=Avena fatua PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:   53 MQIFVKTLTGKTTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 280
            MQIFVKTLTGKT TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY755974 vs. ExPASy Swiss-Prot
Match: UBIQ_ASPOF (Ubiquitin OS=Asparagus officinalis PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 2 
Query:   53 MQIFVKTLTGKTTTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 280
            MQIFVKTLTGKT TLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EY755974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
UBIQ_LUPAL2.763e-3598.68Ubiquitin OS=Lupinus albus PE=3 SV=1[more]
UBIQ_LINUS2.763e-3598.68Ubiquitin OS=Linum usitatissimum PE=3 SV=1[more]
UBIQ_HORVU2.763e-3598.68Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1[more]
UBIQ_HELAN2.763e-3598.68Ubiquitin OS=Helianthus annuus PE=3 SV=1[more]
UBIQ_DESAN2.763e-3598.68Ubiquitin OS=Deschampsia antarctica PE=2 SV=1[more]
UBIQ_DAUCA2.763e-3598.68Ubiquitin OS=Daucus carota PE=3 SV=1[more]
UBIQ_BRARA2.763e-3598.68Ubiquitin OS=Brassica rapa PE=3 SV=1[more]
UBIQ_AVESA2.763e-3598.68Ubiquitin OS=Avena sativa PE=1 SV=1[more]
UBIQ_AVEFA2.763e-3598.68Ubiquitin OS=Avena fatua PE=3 SV=1[more]
UBIQ_ASPOF2.763e-3598.68Ubiquitin OS=Asparagus officinalis PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-B06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755974 ID=EY755974; Name=EY755974; organism=Citrus sinensis; type=EST; length=686bp
TCGACAACCGACGCGTCCGTGAAATTTGTTGCGTCTCTCCTCATCTGCAG
CCATGCAGATCTTCGTGAAAACCCTAACGGGAAAGACCACCACCCTAGAG
GTCGAATCATCGGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAA
GGAGGGGATTCCACCGGACCAGCAGCGTCTCATCTTCGCCGGAAAGCAGC
TCGAGGACGGCAGAACCCTAGCCGACTACAACATCCAAAAGGAGTCAACA
CTCCACCTCGTCCTCCGTCTCCGTGGTGGCGCGAAGAAGCGTAAGAAGAA
GACCTACACCAAGCCGAAAAAGATCAAGCACAAGAAGAAGAAGGTCAAGC
TCGCCGTCTTGCAGTTTTACAAGGTCGATGATTCTGGAAAGGTCCAGAGG
CTGAGGAAGGAGTGTCCGAATGCTGAGTGTGGAGCCGGCACCTTCATGGC
TAACCACTTTGACAGGCACTACTGCGGCAAGTGTGGACTCACCTATGTTT
ACCAGAAGGCTGGCGGTGATTGATCGAGATTAGGTGGTTGTTTTGCTATT
TTTAATTAGTATTAATTACTATGGTTTTTGTGGTTCAAAATTATGACTCT
TTCGTAATTTTGTTTGACTATATACTTGTTTGCTTGAGCGTTTTAATTAA
ATGGTTATCTGTTTTAAATTTTAAAAAAAAAAAAAA
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