EY755965

Overview
NameEY755965
Unique NameEY755965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5506 contig Csv1_Contig5506:35..683. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_CHLCV (Fumarate hydratase class II OS=Chlamydophila caviae GN=fumC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.190e-17
Identity = 31/65 (47.69%), Postives = 46/65 (70.77%), Query Frame = 2
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 340
            ++ + L  SLMLVT+L P +GYD  + +A KA  +   LK+A +++G L++EEFD LVVPE M+G
Sbjct:  394 RLKEYLDNSLMLVTALTPVLGYDKCSKMALKAFHDNINLKEACIQMGYLSAEEFDRLVVPESMVG 458          

HSP 2 Score: 42.3578 bits (98), Expect = 1.190e-17
Identity = 20/49 (40.82%), Postives = 29/49 (59.18%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            +GGS G+FELNV KP+I    L S+ +L     +F    V G++ N+ R
Sbjct:  346 MGGSRGNFELNVMKPVIIYNFLQSVDILAGGMQAFADYFVSGLRVNKPR 394          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_BLOFL (Fumarate hydratase class II OS=Blochmannia floridanus GN=fumC PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.012e-17
Identity = 32/66 (48.48%), Postives = 48/66 (72.73%), Query Frame = 2
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            +I KLL++SLMLVT+L+  IGYD +A +A+ A+  G TLK A+++ G +  ++FD+ V PE MI P
Sbjct:  381 RIEKLLNKSLMLVTALSSHIGYDKSAQIAQTAYLNGITLKAASIQSGYVTEKQFDDWVCPENMIYP 446          

HSP 2 Score: 43.8986 bits (102), Expect = 2.012e-17
Identity = 19/49 (38.78%), Postives = 31/49 (63.27%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            +GGS+G  +LN ++P+I    L S+RLL D+  +F   C+ GI+   +R
Sbjct:  333 LGGSSGQLQLNTYRPLIIYNFLQSIRLLTDSIKNFHDYCIVGIRPKFKR 381          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC2_BRAJA (Fumarate hydratase class II 2 OS=Bradyrhizobium japonicum GN=fumC2 PE=3 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 1.260e-16
Identity = 34/66 (51.52%), Postives = 42/66 (63.64%), Query Frame = 2
Query:  146 KISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            KI + +  SLMLVT+L P IGYD A+ +A  A     TLK AALKLG +   EFD +V P KM+ P
Sbjct:  397 KIKEYVERSLMLVTALAPVIGYDKASRIAHYAMDNDLTLKSAALKLGFVTEPEFDRIVDPAKMVKP 462          

HSP 2 Score: 41.9726 bits (97), Expect = 1.260e-16
Identity = 17/48 (35.42%), Postives = 29/48 (60.42%), Query Frame = 3
Query:    6 GGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRER 149
            GG+ G+ E+NV+KP+I   +  S+ +L D   +F    V G + NR++
Sbjct:  350 GGAGGYLEMNVYKPLIIHNIAQSVTILTDGCTNFRTFLVEGTEPNRKK 397          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_CHLMU (Fumarate hydratase class II OS=Chlamydia muridarum GN=fumC PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.027e-15
Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 2
Query:  143 GKISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 340
            G++ + +  SLMLVT+L P +GYD  + +A KA  E  +LK+A + LG L+ +EFD  VVP  M+G
Sbjct:  393 GQLQQNVERSLMLVTALAPVLGYDKCSKIALKAFHENLSLKEACVSLGFLSEQEFDTHVVPGLMLG 458          

HSP 2 Score: 41.9726 bits (97), Expect = 1.027e-15
Identity = 21/45 (46.67%), Postives = 27/45 (60.00%), Query Frame = 3
Query:    9 GSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANR 143
            G+ G+FELNV KP+I    L S+ LL  A  SF    V G++ NR
Sbjct:  348 GTKGNFELNVMKPVIIYDFLQSVNLLSGAMRSFADYFVSGLKVNR 392          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_CHLTR (Fumarate hydratase class II OS=Chlamydia trachomatis GN=fumC PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.947e-15
Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 2
Query:  143 GKISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 340
            G++ + +  SLMLVT+L P +GYD  + +A KA  E  +LK+A + LG L+ +EFD  V+P  M+G
Sbjct:  393 GQLQQNVERSLMLVTALAPVLGYDKCSKIALKAFHENLSLKEACVSLGFLSEKEFDEHVIPGLMVG 458          

HSP 2 Score: 40.0466 bits (92), Expect = 4.947e-15
Identity = 20/45 (44.44%), Postives = 27/45 (60.00%), Query Frame = 3
Query:    9 GSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANR 143
            G+ G+FELNV KP+I    L S+ LL  A  SF    V G++ N+
Sbjct:  348 GTKGNFELNVMKPVIIYDFLQSVNLLAGAMRSFADYFVCGLKVNK 392          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_BRUSU (Fumarate hydratase class II OS=Brucella suis GN=fumC PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.363e-15
Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 2
Query:   62 SPTFTEIAGRCICFF*EELCERNSS**GKISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            S T    A  C+     E  E N++   +I +LL  SLMLVT+L P IGYDNAA +AK AHK GTTL++ AL  G+++ E++D LV  E+MI P
Sbjct:  377 SDTMVSFADHCV-----EGIEPNTA---RIKELLERSLMLVTALAPAIGYDNAARIAKTAHKNGTTLREEALASGLVSEEDYDRLVRAERMIAP 462          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_BRUME (Fumarate hydratase class II OS=Brucella melitensis GN=fumC PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 6.363e-15
Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 2
Query:   62 SPTFTEIAGRCICFF*EELCERNSS**GKISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            S T    A  C+     E  E N++   +I +LL  SLMLVT+L P IGYDNAA +AK AHK GTTL++ AL  G+++ E++D LV  E+MI P
Sbjct:  377 SDTMVSFADHCV-----EGIEPNTA---RIKELLERSLMLVTALAPAIGYDNAARIAKTAHKNGTTLREEALASGLVSEEDYDRLVRAERMIAP 462          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: FUMC_PROMP (Fumarate hydratase class II OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=fumC PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.808e-14
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 2
Query:  161 LHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 337
            L  SLMLVT+L PKIGY+ AA +A  A  E   LK+A +KLG L + EF++ +   KMI
Sbjct:  403 LENSLMLVTALVPKIGYEKAAEIANLAFNESINLKEATIKLGYLTANEFEDAINTNKMI 461          

HSP 2 Score: 37.7354 bits (86), Expect = 8.808e-14
Identity = 16/46 (34.78%), Postives = 28/46 (60.87%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQAN 140
            +  ++G  ++N +KP+I   +L S++LL  A ++F    V GIQ N
Sbjct:  350 IANASGTLQMNEYKPLIGFNILTSIKLLNHAISNFRLKLVEGIQPN 395          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: ASPA_HELPY (Aspartate ammonia-lyase OS=Helicobacter pylori GN=aspA PE=3 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.930e-13
Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 2
Query:  155 KLLHE----SLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            K+ H+    S+ +VT+LNP IGY+ +A +AK+A K   ++ D AL+  +L  E+ D++  PE M+ P
Sbjct:  394 KICHDYVFNSIGIVTALNPHIGYEKSAMIAKEALKSDRSIYDIALEKKILTKEQLDDIFKPENMLSP 460          

HSP 2 Score: 42.3578 bits (98), Expect = 1.930e-13
Identity = 20/48 (41.67%), Postives = 27/48 (56.25%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRE 146
            +    G  +LNVF+P+IA  L HS  +LG A  +    CV GI AN +
Sbjct:  347 LAAEGGQLQLNVFEPVIAYKLFHSFVILGRAIETLTTKCVEGITANEK 394          
BLAST of EY755965 vs. ExPASy Swiss-Prot
Match: ASPA_HELPJ (Aspartate ammonia-lyase OS=Helicobacter pylori J99 GN=aspA PE=3 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.930e-13
Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 2
Query:  155 KLLHE----SLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 343
            K+ H+    S+ +VT+LNP IGY+ +A +AK+A K   ++ D AL+  +L  E+ D++  PE M+ P
Sbjct:  394 KICHDYVFNSIGIVTALNPHIGYEKSAMIAKEALKSDRSIYDIALEKKILTKEQLDDIFKPENMLSP 460          

HSP 2 Score: 42.3578 bits (98), Expect = 1.930e-13
Identity = 20/48 (41.67%), Postives = 27/48 (56.25%), Query Frame = 3
Query:    3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRE 146
            +    G  +LNVF+P+IA  L HS  +LG A  +    CV GI AN +
Sbjct:  347 LAAEGGQLQLNVFEPVIAYKLFHSFVILGRAIETLTTKCVEGITANEK 394          
The following BLAST results are available for this feature:
BLAST of EY755965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
FUMC_CHLCV1.190e-1747.69Fumarate hydratase class II OS=Chlamydophila cavia... [more]
FUMC_BLOFL2.012e-1748.48Fumarate hydratase class II OS=Blochmannia florida... [more]
FUMC2_BRAJA1.260e-1651.52Fumarate hydratase class II 2 OS=Bradyrhizobium ja... [more]
FUMC_CHLMU1.027e-1545.45Fumarate hydratase class II OS=Chlamydia muridarum... [more]
FUMC_CHLTR4.947e-1543.94Fumarate hydratase class II OS=Chlamydia trachomat... [more]
FUMC_BRUSU6.363e-1547.87Fumarate hydratase class II OS=Brucella suis GN=fu... [more]
FUMC_BRUME6.363e-1547.87Fumarate hydratase class II OS=Brucella melitensis... [more]
FUMC_PROMP8.808e-1450.85Fumarate hydratase class II OS=Prochlorococcus mar... [more]
ASPA_HELPY1.930e-1338.81Aspartate ammonia-lyase OS=Helicobacter pylori GN=... [more]
ASPA_HELPJ1.930e-1338.81Aspartate ammonia-lyase OS=Helicobacter pylori J99... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-A09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755965 ID=EY755965; Name=EY755965; organism=Citrus sinensis; type=EST; length=647bp
CAGTGGGTGGATCAAATGGCCATTTTGAACTAAATGTATTCAAGCCAATG
ATTGCTAGTGGTCTCCTACATTCACTGAGATTGCTGGGAGATGCATCTGC
TTCTTTTGAGAAGAACTGTGTGAGAGGAATTCAAGCTAATAGGGAAAGAT
TTCCAAATTGCTGCACGAGTCATTGATGCTTGTCACATCCTTGAATCCTA
AAATTGGTTATGACAATGCTGCGGCAGTTGCCAAGAAGGCTCACAAGGAG
GGAACTACACTTAAGGATGCTGCATTGAAACTCGGAGTACTCAATAGTGA
AGAATTTGATAATCTTGTGGTACCTGAGAAAATGATTGGCCCATCCGACT
AACCAGCTTATGTGGGTTAAACTCCTGGGATTTGCTTTTGGCTTTTGTAT
CATTTTGCGGGATATCTGTTTCTGCGCCGTTTCTCTCCCTCAAGGCCTCA
ACTGAATCACTTGATAGGGATCCAAATAGTGATTTTGCTTTTATTTAAAA
AAACAAAGAAAGGGGCAACCAAAAAAAAACTATATTCTTGAGGNTTTCCC
AGGAGGAGGCTTCGGTGATATGTCATTTCACGTGGTGACAGAATAGCGAT
TGGTAGGCCCACAAAGGAAGACCTCCCTCATTTTTTGTGCGACAGTG
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