EY755964

Overview
NameEY755964
Unique NameEY755964
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2639 contig Csv1_Contig2639:252..949. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755964 vs. ExPASy Swiss-Prot
Match: RS6A_SCHPO (40S ribosomal protein S6-A OS=Schizosaccharomyces pombe GN=rps6a PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29
Identity = 79/175 (45.14%), Postives = 98/175 (56.00%), Query Frame = 2
Query:   11 GVLSPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 532
            GVL P RVRLLL  G PC+                 CIV  DL+VL L I+K+GE D+PGLTD   P+  GPKRASKIR+ FNLSKEDDVR++V   R     K GKK  +KAPKIQRLVTP TL                      E+ +L+A R+ E +++R    A++ S L
Sbjct:   66 GVLLPHRVRLLLRAGHPCYRPRRDGERKRKSVRG--CIVGQDLAVLALAIIKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRVAEAKQKREVVKARRASSL 237          
BLAST of EY755964 vs. ExPASy Swiss-Prot
Match: RS6_AEDAE (40S ribosomal protein S6 OS=Aedes aegypti GN=RpS6 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.998e-29
Identity = 77/174 (44.25%), Postives = 98/174 (56.32%), Query Frame = 2
Query:    5 RPGVLSPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKV-SKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKR 523
            + GVL+  RVRLLL +G  C+                 CIV  +LS L L++VKKGE D+PGLTDT  PR  GPKRAS IRKL+NL+KEDDVR++V   +R    K GKK  +KAPKIQRL+TP+ L                      EY K+L  R +++R RR   L+  R
Sbjct:   64 KQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRG--CIVDQNLSALALIVVKKGEKDIPGLTDTTVPRRLGPKRASNIRKLYNLTKEDDVRQFV--VKRPLPEKDGKKARTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQERIRRRSRLSSMR 233          
BLAST of EY755964 vs. ExPASy Swiss-Prot
Match: RS6B_SCHPO (40S ribosomal protein S6-B OS=Schizosaccharomyces pombe GN=rps6b PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.222e-29
Identity = 78/175 (44.57%), Postives = 98/175 (56.00%), Query Frame = 2
Query:   11 GVLSPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKK-VSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 532
            GVL P RVRLLL  G PC+                 CIV  DL+VL L IVK+GE D+PGLTD   P+  GPKRASKIR+ FNLSKEDDVR++V   R     K GKK  +KAPKIQRLVTP TL                      E+ +L+A R+ E ++++    A++ S +
Sbjct:   66 GVLLPHRVRLLLRAGHPCYRPRRDGERKRKSVRG--CIVGQDLAVLALAIVKQGEQDIPGLTDVTVPKRLGPKRASKIRRFFNLSKEDDVRQFV-IRREVVPKKEGKKPYTKAPKIQRLVTPRTLQHKRHRFALKRRQAEKNREEAAEFAQLMAKRVAEAKQKKEVVKARRASSM 237          
BLAST of EY755964 vs. ExPASy Swiss-Prot
Match: RS6_AEDAL (40S ribosomal protein S6 OS=Aedes albopictus GN=RpS6 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.385e-28
Identity = 77/174 (44.25%), Postives = 97/174 (55.75%), Query Frame = 2
Query:    5 RPGVLSPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKV-SKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKR 523
            + GVL+  RVRLLL +G  C+                 CIV  +LS L L++VKKGE D+PGLTDT   R  GPKRAS IRKL+NL+KEDDVR+YV   +R    K GKK  +KAPKIQRL+TP+ L                      EY K+L  R +++R RR   L+  R
Sbjct:   64 KQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRG--CIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV--VKRPLPEKDGKKPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQERIRRRSRLSSMR 233          
BLAST of EY755964 vs. ExPASy Swiss-Prot
Match: RS6_DEBHA (40S ribosomal protein S6 OS=Debaryomyces hansenii GN=RPS6 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.742e-27
Identity = 74/176 (42.05%), Postives = 97/176 (55.11%), Query Frame = 2
Query:    5 RPGVLSPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 532
            + GV+ P RV+LLL +G  C+                 CIV+ DL+VL L +VK+G+ D+ GLTDT  P+  GPKRA+ IRK F L+KEDDVR++V    R    K  KK +KAPKIQRLVTP TL                      EY +LLA RL E++  R+E   ++ S L
Sbjct:   64 KQGVMHPTRVKLLLAKGHSCYRPRRTGERKRKSVRG--CIVAQDLAVLALSVVKQGDSDIEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFV---VRREVVKGDKKYTKAPKIQRLVTPQTLQRKRALKAQKVKNAQQQRDAAAEYAQLLAQRLHERKAERAEIKKRRASSL 234          
BLAST of EY755964 vs. ExPASy Swiss-Prot
Match: RS6_YEAST (40S ribosomal protein S6 OS=Saccharomyces cerevisiae GN=RPS6A PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.337e-27
Identity = 76/176 (43.18%), Postives = 94/176 (53.41%), Query Frame = 2
Query:    5 RPGVLSPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 532
            + GVL P R++LLL +   C+                  IV PDL+VL LVIVKKGE +L GLTDT  P+  GPKRA+ IRK F LSKEDDVR +V    R   TK  K  +KAPKIQRLVTP  L                      EY +LLA RL E++  ++E   ++ S L
Sbjct:   64 KQGVLLPTRIKLLLTKNVSCYRPRRDGERKRKSVRG--AIVGPDLAVLALVIVKKGEQELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFV---IRREVTKGEKTYTKAPKIQRLVTPQRLQRKRHQRALKVRNAQAQREAAAEYAQLLAKRLSERKAEKAEIRKRRASSL 234          
BLAST of EY755964 vs. ExPASy Swiss-Prot
Match: RS6_CANGA (40S ribosomal protein S6 OS=Candida glabrata GN=RPS6A PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26
Identity = 75/176 (42.61%), Postives = 96/176 (54.55%), Query Frame = 2
Query:    5 RPGVLSPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 532
            + GVL P RV+LLL +G  C+                  IV PDL+VL+LVIVKKGE +L G+TD   P+  GPKRA+ IRK F L+KEDDVR +V    R   TK  K  +KAPKIQRLVTP  L                      EY +LLA RL E++  ++E+  ++ S L
Sbjct:   64 KQGVLLPTRVKLLLAKGHSCYRPRRSGERKRKSVRG--AIVGPDLAVLSLVIVKKGEQELEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFV---IRREVTKGEKTYTKAPKIQRLVTPQRLQRKRYQRNLKVRNAQAQREAAAEYAQLLAKRLAERKAEKAETRKRRASSL 234          
BLAST of EY755964 vs. ExPASy Swiss-Prot
Match: RS6_CAEEL (40S ribosomal protein S6 OS=Caenorhabditis elegans GN=rps-6 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.426e-26
Identity = 73/174 (41.95%), Postives = 97/174 (55.75%), Query Frame = 2
Query:    5 RPGVLSPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRS 526
            + G+L+ GRVRLLL +G  C+                 CIV  ++S L+LVIVKKG+ ++ GLTD+  PR  GPKRASKIRKLFNL+K DDV KYV T+ +TF     K +  APKIQRL+TP  +                       Y KLLA   KE+ + +   +A++RS
Sbjct:   64 KQGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRG--CIVDANMSALSLVIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGVTKTI--APKIQRLITPARIARKKYLLRQKRNQKIKMRDDAAAYHKLLAKYSKEEHDAK---IARRRS 230          
BLAST of EY755964 vs. ExPASy Swiss-Prot
Match: RS6_KLULA (40S ribosomal protein S6 OS=Kluyveromyces lactis GN=RPS6 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.054e-25
Identity = 72/176 (40.91%), Postives = 93/176 (52.84%), Query Frame = 2
Query:    5 RPGVLSPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQRERRSESLAKKRSRL 532
            + GVL P RV+LLL +G  C+                  IV PDL+VL L+I KKGE ++ G+T+   P+  GPKRA+ IRK F L+KEDDVR YV    R   TK  K  +KAPKIQRLVTP  L                      EY +LLA RL E++  ++E   ++ S L
Sbjct:   64 KQGVLLPTRVKLLLAKGHSCYRPRRNGERKRKSVRG--AIVGPDLAVLALIITKKGEQEIEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYV---IRREVTKGDKSYTKAPKIQRLVTPQRLQRKRQQKSLKIKNAQAQREAAAEYAQLLAKRLSERKAEKAEVRKRRASSL 234          
BLAST of EY755964 vs. ExPASy Swiss-Prot
Match: RS6_KLUMA (40S ribosomal protein S6 OS=Kluyveromyces marxianus GN=RPS6 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25
Identity = 75/173 (43.35%), Postives = 94/173 (54.34%), Query Frame = 2
Query:    5 RPGVLSPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLXXXXXXXXXXXXXXXXXXXXXXEYQKLLATRLKEQ----RERRSESL 511
            + GVL P RV+LL+ +GT C+                  IV PDL+VL LVIVKKG+ ++ G+T+   P+  GPKRA+ IRK F L+KEDDVR YV    R   TK  K  +KAPKIQRLVTP  L                      EY +LLA RL E+    R+RR+ SL
Sbjct:   64 KQGVLLPTRVKLLMAKGTSCYRPRRNGERKRKSVRG--AIVGPDLAVLALVIVKKGDQEIEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYV---IRREVTKGEKTYTKAPKIQRLVTPQRLQRKRQQKALKIKNAQAQREAAAEYAQLLAKRLAERKAEVRKRRASSL 231          
The following BLAST results are available for this feature:
BLAST of EY755964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
RS6A_SCHPO1.795e-2945.1440S ribosomal protein S6-A OS=Schizosaccharomyces ... [more]
RS6_AEDAE3.998e-2944.2540S ribosomal protein S6 OS=Aedes aegypti GN=RpS6 ... [more]
RS6B_SCHPO5.222e-2944.5740S ribosomal protein S6-B OS=Schizosaccharomyces ... [more]
RS6_AEDAL3.385e-2844.2540S ribosomal protein S6 OS=Aedes albopictus GN=Rp... [more]
RS6_DEBHA3.742e-2742.0540S ribosomal protein S6 OS=Debaryomyces hansenii ... [more]
RS6_YEAST8.337e-2743.1840S ribosomal protein S6 OS=Saccharomyces cerevisi... [more]
RS6_CANGA1.422e-2642.6140S ribosomal protein S6 OS=Candida glabrata GN=RP... [more]
RS6_CAEEL2.426e-2641.9540S ribosomal protein S6 OS=Caenorhabditis elegans... [more]
RS6_KLULA2.054e-2540.9140S ribosomal protein S6 OS=Kluyveromyces lactis G... [more]
RS6_KLUMA2.682e-2543.3540S ribosomal protein S6 OS=Kluyveromyces marxianu... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-A07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755964 ID=EY755964; Name=EY755964; organism=Citrus sinensis; type=EST; length=698bp
CACGCGTCCGGGAGTGCTGTCTCCCGGCCGTGTTCGTCTTCTGCTCCACC
GTGGTACCCCTTGCTTCCGTGGGTATGGCAGGAGAGATGGAGAGCGCAGG
AGGAAGTCTGTTCGTGGATGCATAGTTAGTCCAGATCTCTCCGTGTTGAA
TTTGGTCATTGTGAAAAAGGGAGAACATGACCTTCCTGGACTTACCGATA
CAGAAAAGCCCAGAATGAGAGGTCCCAAGAGAGCATCGAAGATCAGGAAG
TTGTTCAACCTTTCCAAGGAGGATGATGTTAGGAAGTACGTTAACACCTA
TCGTAGGACCTTCACAACAAAATCTGGTAAGAAGGTTAGCAAGGCACCGA
AAATTCAGAGGTTGGTAACTCCTTTGACTCTGCAAAGGAAGCGTGCAAGA
ATTGCAGAAAAGAAGCAGAGAATTGCCAAGGCCAAGGCTGAAGCAGCGGA
ATACCAGAAGCTCCTTGCTACCAGGTTGAAGGAGCAGCGTGAACGCCGCA
GTGAGAGTTTGGCAAAGAAGAGGTCTAGGCTCTCTGCTGCTTCAAAGCCA
TCTATTGCAGCTTAGATTAGATTCTTTGCTATAGTTGTTCTTTGGTCGGT
TATGTATTGTCCTGCTGAATTCTTTTCTATAGGTTGAGGAAATTTCGAGT
GTTTTTGACTTTATATCCCATGGAATGTGATACAATAACCTTCATGGN
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