EY755955

Overview
NameEY755955
Unique NameEY755955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: BADH_SCHPO (Probable betaine aldehyde dehydrogenase OS=Schizosaccharomyces pombe GN=meu8 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.708e-14
Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = -2
Query:  254 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 607
            GYF+ PTVF++V     I ++EIFGPV ++  F   ++ +  AN + +GL +GVF+ +  T       + AG   +N Y V    +P+ G+K SG+G     +  N Y+++K + Q V
Sbjct:  382 GYFIPPTVFTNVQTHNKIWREEIFGPVLAVKTFHTNEEALELANDSEYGLGSGVFSTNPKTLEFFSNNIEAGMCSLNNYHVVTHELPWIGWKHSGLGVGLSKHGYNEYMRLKQITQYV 499          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: SSDH_MOUSE (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh5a1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.230e-14
Identity = 41/114 (35.96%), Postives = 62/114 (54.39%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            G F +PT+ S+VT DML   +E FGP+  ++KF + ++ +  AN    GLA   +++       +   L  G V +N   +     PFGG K SG+GRE   Y ++ YL+VK V
Sbjct:  405 GNFFEPTLLSNVTRDMLCITEETFGPLAPVIKFDKEEEAVAIANAAEVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLEVKYV 518          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ALDH5_BACSU (Putative aldehyde dehydrogenase yfmT OS=Bacillus subtilis GN=yfmT PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.230e-14
Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = -2
Query:  272 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAA-IPFGGYKLSGIGREKGIYSLNAYLQVK 607
            G  V+PT+  DV   M IA++E+FGPV S +KF   D+ +  AN+T FGL+  V T + +      + +  G + +N   + D   + FGG K SG+GR  G +SL  +  +K
Sbjct:  360 GTIVEPTILKDVKPFMSIAKEELFGPVVSFMKFDSEDEAVDIANETPFGLSGAVHTSNLERGVAFAKRIETGMIHVNDTTINDEPNVAFGGEKQSGLGRLNGEWSLEEFTTLK 472          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_BACLD (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rocA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.489e-14
Identity = 37/103 (35.92%), Postives = 55/103 (53.40%), Query Frame = -2
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI--NCYDVFDAAIPFGGYKLSGIGREKG 607
            GYF++PT+F+D+     + Q+EIFGPV +  K    D+ +  AN T +GL   V TK+ D  N   +    G ++   NC        PFGG+K+SG   + G
Sbjct:  396 GYFIEPTIFADLDPKARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: AL221_ARATH (Aldehyde dehydrogenase 22A1 OS=Arabidopsis thaliana GN=ALDH22A1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.888e-13
Identity = 42/116 (36.21%), Postives = 65/116 (56.03%), Query Frame = -2
Query:  260 FVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCY--DVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQ 601
            +  PTV  +V  +M I ++E FGP+  I++F   ++VI+ AN +R+ L   VF+ S   A  +   ++ G   IN +  +    ++PFGG K SG GR  GI  L A   VK+VV+
Sbjct:  414 YFPPTVLINVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYALGCAVFSGSKHRAKQIASQIQCGVAAINDFASNYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVE 529          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: SSDH_PONPY (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pongo pygmaeus GN=ALDH5A1 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.220e-13
Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = -2
Query:  266 FVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 601
            F +PT+  +VT DML   +E FGP+  ++KF   ++ I  AN    GLA   +++       +   L  G V +N   +     PFGG K SG+GRE   Y ++ YL++K V
Sbjct:  419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFNTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 530          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_BACP2 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus pumilus (strain SAFR-032) GN=rocA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.220e-13
Identity = 37/103 (35.92%), Postives = 53/103 (51.46%), Query Frame = -2
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI--NCYDVFDAAIPFGGYKLSGIGREKG 607
            GYF+ PTVF+D+     + Q+EIFGPV +  K    D+ +  AN T +GL   V T + D  N   +    G ++   NC        PFGG+K+SG   + G
Sbjct:  395 GYFIHPTVFADLEPTSRLMQEEIFGPVLAFSKVSSFDEALEVANNTEYGLTGAVITNNRDHINRAKQEFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 497          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: SSDH_PANTR (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan troglodytes GN=ALDH5A1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.206e-13
Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = -2
Query:  266 FVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 601
            F +PT+  +VT DML   +E FGP+  ++KF   ++ I  AN    GLA   +++       +   L  G V +N   +     PFGG K SG+GRE   Y ++ YL++K V
Sbjct:  419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 530          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: SSDH_PANPA (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan paniscus GN=ALDH5A1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.206e-13
Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = -2
Query:  266 FVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 601
            F +PT+  +VT DML   +E FGP+  ++KF   ++ I  AN    GLA   +++       +   L  G V +N   +     PFGG K SG+GRE   Y ++ YL++K V
Sbjct:  419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 530          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: SSDH_HYLLA (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Hylobates lar GN=ALDH5A1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.206e-13
Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = -2
Query:  266 FVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 601
            F +PT+  +VT DML   +E FGP+  ++KF   ++ I  AN    GLA   +++       +   L  G V +N   +     PFGG K SG+GRE   Y ++ YL++K V
Sbjct:  419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 530          
The following BLAST results are available for this feature:
BLAST of EY755955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
BADH_SCHPO1.708e-1433.90Probable betaine aldehyde dehydrogenase OS=Schizos... [more]
SSDH_MOUSE2.230e-1435.96Succinate-semialdehyde dehydrogenase, mitochondria... [more]
ALDH5_BACSU2.230e-1436.28Putative aldehyde dehydrogenase yfmT OS=Bacillus s... [more]
ROCA_BACLD6.489e-1435.921-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
AL221_ARATH1.888e-1336.21Aldehyde dehydrogenase 22A1 OS=Arabidopsis thalian... [more]
SSDH_PONPY3.220e-1334.82Succinate-semialdehyde dehydrogenase, mitochondria... [more]
ROCA_BACP23.220e-1335.921-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
SSDH_PANTR4.206e-1334.82Succinate-semialdehyde dehydrogenase, mitochondria... [more]
SSDH_PANPA4.206e-1334.82Succinate-semialdehyde dehydrogenase, mitochondria... [more]
SSDH_HYLLA4.206e-1334.82Succinate-semialdehyde dehydrogenase, mitochondria... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755955 ID=EY755955; Name=EY755955; organism=Citrus sinensis; type=EST; length=623bp
TTCGGTCGACCACGCGTCCGTTTTTTTTTTCTTTTTACAATAACACTCCA
TACCATTCAAATTTCAGTGAAAGCTGCCTTGATCAACAGACAGGCATCAT
TGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATCCAT
TTGCTCCATAATTACAAGCTGATATTAGCACGCTGTCCTTATTCATAAAC
ACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAAAGCCATGCTGGGTT
CTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGCTGT
AAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAAGGA
ATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGCTCT
CAGTGCACGCATCATGGTGTTTGCAGTGTCTGCACTCTTGGTGAAAACCC
CAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCATCA
GTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATCCTG
TGCTATCAACATGTCATCCGTAACATCTGAGAAGACAGTTGGCTGAACAA
AGTAGCCCTAGTTCTAGATCGCG
back to top