EY755955

Overview
NameEY755955
Unique NameEY755955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: GABD_SYNY3 (Probable succinate-semialdehyde dehydrogenase [NADP+] OS=Synechocystis sp. (strain PCC 6803) GN=gabD PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.650e-12
Identity = 39/114 (34.21%), Postives = 56/114 (49.12%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            G +  PT+ +DV  +    + E FGPV         ++ I  AN   FGL A  +T + +    ++R + AG V+IN     D  IPFGG K SG GRE G   +  ++  K V
Sbjct:  338 GNYYPPTLLTDVPPNAPTYRQEFFGPVALGFTVDNLEEAIALANDIPFGLGASAWTTNPENQQKLIRGIEAGAVFINGMTKSDPRIPFGGIKRSGFGRELGRMGILEFVNAKTV 451          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_GEOKA (1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus kaustophilus GN=rocA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.073e-12
Identity = 35/103 (33.98%), Postives = 53/103 (51.46%), Query Frame = -2
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            G+F+QPTVF+DV  +  I Q+EIFGPV +  K ++ D  +  AN T +GL   V +++             G ++ N  C        PFGG+ +SG   + G
Sbjct:  395 GFFIQPTVFADVDPNARIMQEEIFGPVVAFAKARDFDHALEIANNTEYGLTGAVISRNRANLEKARHEFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: IOLA_LISIN (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria innocua GN=iolA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.073e-12
Identity = 43/117 (36.75%), Postives = 60/117 (51.28%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINC-YDVFDAAIPFGGYKLSGIG--REKGIYSLNAYLQVKAV 607
            GYFV PT+  DVT DM I +DEIF PV S+++ K   + +R AN++ F   A +FT +A         + AG + +N       A  PF G+K S  G     G  S++ Y   K V
Sbjct:  361 GYFVGPTILEDVTTDMTIWKDEIFAPVLSVIRVKNLQEAVRVANQSEFANGACIFTNNAKAIRYFREKIDAGMLGVNLGVPAPMAFFPFSGWKSSFYGTLHANGKDSVDFYTHKKVV 477          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ALDHX_YEAST (Aldehyde dehydrogenase 1, mitochondrial OS=Saccharomyces cerevisiae GN=ALD1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.073e-12
Identity = 40/108 (37.04%), Postives = 63/108 (58.33%), Query Frame = -2
Query:  278 FVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQ 601
            ++ PT+ + +TD+  I ++E+F P+ +IL  K  D+ I+R N ++FGLAA V TK       +  AL+   ++I C  +    IPFGG K SG+G E G  +L  Y +
Sbjct:  398 YLYPTLSATLTDECRIMKEEVFAPIITILCVKTVDEAIQRGNNSKFGLAAYV-TKENVHGIILSTALKTVKLFIICVHLASYQIPFGGNKNSGMGAELGKRALENYTE 504          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_BACWK (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus weihenstephanensis (strain KBAB4) GN=rocA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.932e-12
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = -2
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++ N  C        PFGG+ +SG   + G
Sbjct:  395 GWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVLSNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_BACHK (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus thuringiensis subsp. konkukian GN=rocA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.932e-12
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = -2
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++ N  C        PFGG+ +SG   + G
Sbjct:  395 GWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_BACCZ (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=rocA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.932e-12
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = -2
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++ N  C        PFGG+ +SG   + G
Sbjct:  395 GWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_BACCQ (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain Q1) GN=rocA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.932e-12
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = -2
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++ N  C        PFGG+ +SG   + G
Sbjct:  395 GWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_BACC7 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain AH187) GN=rocA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.932e-12
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = -2
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++ N  C        PFGG+ +SG   + G
Sbjct:  395 GWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_BACC3 (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus (strain 03BB102) GN=rocA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.932e-12
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = -2
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + + D           G ++ N  C        PFGG+ +SG   + G
Sbjct:  395 GWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRDHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497          
The following BLAST results are available for this feature:
BLAST of EY755955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
GABD_SYNY34.650e-1234.21Probable succinate-semialdehyde dehydrogenase [NAD... [more]
ROCA_GEOKA6.073e-1233.981-pyrroline-5-carboxylate dehydrogenase OS=Geobaci... [more]
IOLA_LISIN6.073e-1236.75Methylmalonate semialdehyde dehydrogenase [acylati... [more]
ALDHX_YEAST6.073e-1237.04Aldehyde dehydrogenase 1, mitochondrial OS=Sacchar... [more]
ROCA_BACWK7.932e-1233.011-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACHK7.932e-1233.011-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACCZ7.932e-1233.011-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACCQ7.932e-1233.011-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC77.932e-1233.011-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ROCA_BACC37.932e-1233.011-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755955 ID=EY755955; Name=EY755955; organism=Citrus sinensis; type=EST; length=623bp
TTCGGTCGACCACGCGTCCGTTTTTTTTTTCTTTTTACAATAACACTCCA
TACCATTCAAATTTCAGTGAAAGCTGCCTTGATCAACAGACAGGCATCAT
TGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATCCAT
TTGCTCCATAATTACAAGCTGATATTAGCACGCTGTCCTTATTCATAAAC
ACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAAAGCCATGCTGGGTT
CTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGCTGT
AAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAAGGA
ATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGCTCT
CAGTGCACGCATCATGGTGTTTGCAGTGTCTGCACTCTTGGTGAAAACCC
CAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCATCA
GTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATCCTG
TGCTATCAACATGTCATCCGTAACATCTGAGAAGACAGTTGGCTGAACAA
AGTAGCCCTAGTTCTAGATCGCG
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