EY755955

Overview
NameEY755955
Unique NameEY755955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_STAAE (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain Newman) GN=rocA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = -2 
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            GYFV+PT+ S +     I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +     +     G +++N  C        PFGG+K+SG   + G
Sbjct:  394 GYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAKTG 496
[Close]
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_STAAC (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain COL) GN=rocA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = -2 
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            GYFV+PT+ S +     I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +     +     G +++N  C        PFGG+K+SG   + G
Sbjct:  394 GYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAKTG 496
[Close]
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_STAAB (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=rocA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = -2 
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            GYFV+PT+ S +     I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +     +     G +++N  C        PFGG+K+SG   + G
Sbjct:  394 GYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAKTG 496
[Close]
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_STAA9 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain JH9) GN=rocA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = -2 
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            GYFV+PT+ S +     I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +     +     G +++N  C        PFGG+K+SG   + G
Sbjct:  394 GYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAKTG 496
[Close]
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_STAA8 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325) GN=rocA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = -2 
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            GYFV+PT+ S +     I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +     +     G +++N  C        PFGG+K+SG   + G
Sbjct:  394 GYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAKTG 496
[Close]
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_STAA3 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=rocA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = -2 
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            GYFV+PT+ S +     I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +     +     G +++N  C        PFGG+K+SG   + G
Sbjct:  394 GYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAKTG 496
[Close]
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_STAA2 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain JH1) GN=rocA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = -2 
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            GYFV+PT+ S +     I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +     +     G +++N  C        PFGG+K+SG   + G
Sbjct:  394 GYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAKTG 496
[Close]
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_STAA1 (1-pyrroline-5-carboxylate dehydrogenase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=rocA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = -2 
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            GYFV+PT+ S +     I Q+EIFGPV   +K  + D+ I  AN T +GL   V T + +     +     G +++N  C        PFGG+K+SG   + G
Sbjct:  394 GYFVEPTIISGLKSKDRIMQEEIFGPVVGFVKVNDFDEAIEVANDTDYGLTGAVITNNREHWIKAVNEFDVGNLYLNRGCTSAVVGYHPFGGFKMSGTDAKTG 496
[Close]
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: LADH_METVS (Lactaldehyde dehydrogenase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0796 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 38/113 (33.63%), Postives = 62/113 (54.87%), Query Frame = -2 
Query:  263 VQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF-DAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV 598
            + P V + + +D ++++ E FGP+  ILK K+ +  +  AN +++GL AG+FT   + A      L  G V +N    F    +PFGG K SG+G+E   Y++    + K VV
Sbjct:  350 ISPAVLN-IDEDNILSKVEAFGPILPILKAKDDEHALNIANNSKYGLQAGIFTNDINKAMKFANKLEYGGVIVNGSPTFRKDNMPFGGIKKSGLGKEGIKYAVEEMCETKTVV 461
[Close]
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: IOLA2_BACWK (Methylmalonate semialdehyde dehydrogenase [acylating] 2 OS=Bacillus weihenstephanensis (strain KBAB4) GN=iolA2 PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.937e-11
Identity = 40/98 (40.82%), Postives = 53/98 (54.08%), Query Frame = -2 
Query:  317 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINC-YDVFDAAIPFGGYKLSGIG 607
            GYFV PT+F +VT +M I QDEIF PV SI++ K+  + I  AN + F   A ++T SA         + AG + +N       A  PF GYK S  G
Sbjct:  363 GYFVGPTIFDNVTQEMKIWQDEIFAPVLSIVRVKDLMEAIHVANASPFANGACLYTNSAKAIREFREEIDAGMLGVNLGVPAPMAFFPFSGYKKSFYG 460
The following BLAST results are available for this feature:
BLAST of EY755955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
ROCA_STAAE3.937e-1134.951-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAAC3.937e-1134.951-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAAB3.937e-1134.951-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAA93.937e-1134.951-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAA83.937e-1134.951-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAA33.937e-1134.951-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAA23.937e-1134.951-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
ROCA_STAA13.937e-1134.951-pyrroline-5-carboxylate dehydrogenase OS=Staphyl... [more]
LADH_METVS3.937e-1133.63Lactaldehyde dehydrogenase OS=Methanococcus vannie... [more]
IOLA2_BACWK3.937e-1140.82Methylmalonate semialdehyde dehydrogenase [acylati... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755955 ID=EY755955; Name=EY755955; organism=Citrus sinensis; type=EST; length=623bp
TTCGGTCGACCACGCGTCCGTTTTTTTTTTCTTTTTACAATAACACTCCA
TACCATTCAAATTTCAGTGAAAGCTGCCTTGATCAACAGACAGGCATCAT
TGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATCCAT
TTGCTCCATAATTACAAGCTGATATTAGCACGCTGTCCTTATTCATAAAC
ACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAAAGCCATGCTGGGTT
CTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGCTGT
AAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAAGGA
ATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGCTCT
CAGTGCACGCATCATGGTGTTTGCAGTGTCTGCACTCTTGGTGAAAACCC
CAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCATCA
GTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATCCTG
TGCTATCAACATGTCATCCGTAACATCTGAGAAGACAGTTGGCTGAACAA
AGTAGCCCTAGTTCTAGATCGCG
back to top