EY755920

Overview
NameEY755920
Unique NameEY755920
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_STAES (DNA topoisomerase 4 subunit B OS=Staphylococcus epidermidis (strain ATCC 12228) GN=parE PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.603e-19
Identity = 51/139 (36.69%), Postives = 81/139 (58.27%), Query Frame = 3 
Query:   36 MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKG----KLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            +G DF I+   Y++I+  TDAD  GAHI  L+LTFF+KY   L     +++ +PPLYK +KG    K V+  + D +L N+        +  +QR  GL  M P ++W TT+NP+ R L ++ ++D  ++    ++LMG
Sbjct:  484 VGTDFKIEDSNYNRIIIMTDADTDGAHIQVLLLTFFFKYMKPLVQAGRVFIALPPLYKLEKGKGKNKKVEYAWTDEELENLQKQLGKGFI--LQRYKGLGEMNPEQLWETTMNPETRTLIRVQVEDEVRSSKRVTTLMG 620
[Close]
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_STAEQ (DNA topoisomerase 4 subunit B OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=parE PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.603e-19
Identity = 51/139 (36.69%), Postives = 81/139 (58.27%), Query Frame = 3 
Query:   36 MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKG----KLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            +G DF I+   Y++I+  TDAD  GAHI  L+LTFF+KY   L     +++ +PPLYK +KG    K V+  + D +L N+        +  +QR  GL  M P ++W TT+NP+ R L ++ ++D  ++    ++LMG
Sbjct:  484 VGTDFKIEDSNYNRIIIMTDADTDGAHIQVLLLTFFFKYMKPLVQAGRVFIALPPLYKLEKGKGKNKKVEYAWTDEELENLQKQLGKGFI--LQRYKGLGEMNPEQLWETTMNPETRTLIRVQVEDEVRSSKRVTTLMG 620
[Close]
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_BACSU (DNA topoisomerase 4 subunit B OS=Bacillus subtilis GN=parE PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.603e-19
Identity = 52/141 (36.88%), Postives = 81/141 (57.45%), Query Frame = 3 
Query:   30 GEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKG----KLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            G +G DF I  + Y +I+  TDAD  GAHI  L+LTFFY+Y   L +   +++ +PPLYK  KG    ++++  + D ++ +V          +IQR  GL  M   ++W TT+NP+ R L ++ IDDA +     ++LMG
Sbjct:  481 GGVGADFSIDDINYDKIIIMTDADTDGAHIQVLLLTFFYRYMKPLIEHGKVFIALPPLYKVSKGSGKKEIIEYAWSDEEMGDVLKKVGKG--YTIQRYKGLGEMNADQLWETTMNPESRTLVRVKIDDAARVERRVTTLMG 619
[Close]
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_STAAW (DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain MW2) GN=parE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.557e-19
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = 3 
Query:   36 MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKG----KLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            +G DF I+   Y++++  TDAD  GAHI  L+LTFF+KY   L     +++ +PPLYK +KG    K V+  + D +LN +          ++QR  GL  M P ++W TT+NP+ R L ++ ++D  ++    ++LMG
Sbjct:  484 VGTDFKIEDSNYNRVIIMTDADTDGAHIQVLLLTFFFKYMKPLVQAGRVFIALPPLYKLEKGKGKTKRVEYAWTDEELNKLQKELGKGF--TLQRYKGLGEMNPEQLWETTMNPETRTLIRVQVEDEVRSSKRVTTLMG 620
[Close]
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_STAAU (DNA topoisomerase 4 subunit B OS=Staphylococcus aureus GN=parE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.557e-19
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = 3 
Query:   36 MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKG----KLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            +G DF I+   Y++++  TDAD  GAHI  L+LTFF+KY   L     +++ +PPLYK +KG    K V+  + D +LN +          ++QR  GL  M P ++W TT+NP+ R L ++ ++D  ++    ++LMG
Sbjct:  484 VGTDFKIEDSNYNRVIIMTDADTDGAHIQVLLLTFFFKYMKPLVQAGRVFIALPPLYKLEKGKGKTKRVEYAWTDEELNKLQKELGKGF--TLQRYKGLGEMNPEQLWETTMNPETRTLIRVQVEDEVRSSKRVTTLMG 620
[Close]
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_STAAS (DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain MSSA476) GN=parE PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.557e-19
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = 3 
Query:   36 MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKG----KLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            +G DF I+   Y++++  TDAD  GAHI  L+LTFF+KY   L     +++ +PPLYK +KG    K V+  + D +LN +          ++QR  GL  M P ++W TT+NP+ R L ++ ++D  ++    ++LMG
Sbjct:  484 VGTDFKIEDSNYNRVIIMTDADTDGAHIQVLLLTFFFKYMKPLVQADRVFIALPPLYKLEKGKGKTKRVEYAWTDEELNKLQKELGKGF--TLQRYKGLGEMNPEQLWETTMNPETRTLIRVQVEDEVRSSKRVTTLMG 620
[Close]
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_STAAR (DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain MRSA252) GN=parE PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.557e-19
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = 3 
Query:   36 MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKG----KLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            +G DF I+   Y++++  TDAD  GAHI  L+LTFF+KY   L     +++ +PPLYK +KG    K V+  + D +LN +          ++QR  GL  M P ++W TT+NP+ R L ++ ++D  ++    ++LMG
Sbjct:  484 VGTDFKIEDSNYNRVIIMTDADTDGAHIQVLLLTFFFKYMKPLVQAGRVFIALPPLYKLEKGKGKTKRVEYAWTDEELNKLQKELGKGF--TLQRYKGLGEMNPEQLWETTMNPETRTLIRVQVEDEVRSSKRVTTLMG 620
[Close]
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_STAAN (DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain N315) GN=parE PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.557e-19
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = 3 
Query:   36 MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKG----KLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            +G DF I+   Y++++  TDAD  GAHI  L+LTFF+KY   L     +++ +PPLYK +KG    K V+  + D +LN +          ++QR  GL  M P ++W TT+NP+ R L ++ ++D  ++    ++LMG
Sbjct:  484 VGTDFKIEDSNYNRVIIMTDADTDGAHIQVLLLTFFFKYMKPLVQAGRVFIALPPLYKLEKGKGKTKRVEYAWTDEELNKLQKELGKGF--TLQRYKGLGEMNPEQLWETTMNPETRTLIRVQVEDEVRSSKRVTTLMG 620
[Close]
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_STAAM (DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=parE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.557e-19
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = 3 
Query:   36 MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKG----KLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            +G DF I+   Y++++  TDAD  GAHI  L+LTFF+KY   L     +++ +PPLYK +KG    K V+  + D +LN +          ++QR  GL  M P ++W TT+NP+ R L ++ ++D  ++    ++LMG
Sbjct:  484 VGTDFKIEDSNYNRVIIMTDADTDGAHIQVLLLTFFFKYMKPLVQAGRVFIALPPLYKLEKGKGKTKRVEYAWTDEELNKLQKELGKGF--TLQRYKGLGEMNPEQLWETTMNPETRTLIRVQVEDEVRSSKRVTTLMG 620
[Close]
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_STAAC (DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain COL) GN=parE PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.557e-19
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = 3 
Query:   36 MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKG----KLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            +G DF I+   Y++++  TDAD  GAHI  L+LTFF+KY   L     +++ +PPLYK +KG    K V+  + D +LN +          ++QR  GL  M P ++W TT+NP+ R L ++ ++D  ++    ++LMG
Sbjct:  484 VGTDFKIEDSNYNRVIIMTDADTDGAHIQVLLLTFFFKYMKPLVQAGRVFIALPPLYKLEKGKGKTKRVEYAWTDEELNKLQKELGKGF--TLQRYKGLGEMNPEQLWETTMNPETRTLIRVQVEDEVRSSKRVTTLMG 620
The following BLAST results are available for this feature:
BLAST of EY755920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PARE_STAES5.603e-1936.69DNA topoisomerase 4 subunit B OS=Staphylococcus ep... [more]
PARE_STAEQ5.603e-1936.69DNA topoisomerase 4 subunit B OS=Staphylococcus ep... [more]
PARE_BACSU5.603e-1936.88DNA topoisomerase 4 subunit B OS=Bacillus subtilis... [more]
PARE_STAAW9.557e-1935.97DNA topoisomerase 4 subunit B OS=Staphylococcus au... [more]
PARE_STAAU9.557e-1935.97DNA topoisomerase 4 subunit B OS=Staphylococcus au... [more]
PARE_STAAS9.557e-1935.97DNA topoisomerase 4 subunit B OS=Staphylococcus au... [more]
PARE_STAAR9.557e-1935.97DNA topoisomerase 4 subunit B OS=Staphylococcus au... [more]
PARE_STAAN9.557e-1935.97DNA topoisomerase 4 subunit B OS=Staphylococcus au... [more]
PARE_STAAM9.557e-1935.97DNA topoisomerase 4 subunit B OS=Staphylococcus au... [more]
PARE_STAAC9.557e-1935.97DNA topoisomerase 4 subunit B OS=Staphylococcus au... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-D11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755920 ID=EY755920; Name=EY755920; organism=Citrus sinensis; type=EST; length=892bp
CCCGCGTCCGAATTCGTGTTCCCGGACTTGGAGAAATGGGAGAGGATTTT
ATGATACAGGCTCTGCGATATCATCAGATCCTCACATCAACAGATGCTGA
CGGCTACGGTGCTCACATCCTAACGCTGATGTTGACATTTTTCTACAAAT
ATCAAAACACCTTATTTGATGACTGTTGGATTTATGTCTGCGTTCCACCC
CTCTACAAAGACGACAAGGGAAAGCTGGTACAGGGCTGCTATGATGATGC
ACAGCTGAATAATGTCCATAGCTCCTTCCCTTCACATGCTTTGAATAGCA
TTCAAAGGCTCTCAGGCCTGAGATACATGATGCCTGTGCGGATGTGGTAG
ACAACACTGAACCCTCAGATCCGAATGCTTAGGCAACTGGCGATTGACGA
TGCAACACAAACACATGTTGTGTTCTCCTCCCTCATGGGGGCCATGGCGG
ACACTCTGAAGGGACTCATACAGAATGCTGCAAACCTCCTAAACCTGCAA
CATCTTGAGATCTAAGCCATCACTTAGAATGAGATCGTCATTCTTTGCAT
GTGAAACTCTGGAGAACATTGCTCCTTTATCGGAGAGCACAATGAAGATG
ATTCTATTCTTGAACATAGCTATCTGAACAGCCGTGCTAGTGTTAATACG
CAAGATTTATGTACTTTCTGCACAGTTCTTAGGGCTAGATGGATATTGAC
ATTGCATAGTTGCATATTAAAATTTACTGGCTCTGATGTAACGTGAACAG
TATGTGGATTTATCTCAAACTGATATCCTGAANATTTAATTTCGGAGATG
ACACAAAGATGCCCGACCCTCTGGAGGATCGAGGTAGCATATCTCTGATG
CAAAATATAACCCATCGAATGTGCCCCGCATTCATTCACTGG
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