EY755920

Overview
NameEY755920
Unique NameEY755920
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_STAA8 (DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain NCTC 8325) GN=parE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.557e-19
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = 3
Query:   36 MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKG----KLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            +G DF I+   Y++++  TDAD  GAHI  L+LTFF+KY   L     +++ +PPLYK +KG    K V+  + D +LN +          ++QR  GL  M P ++W TT+NP+ R L ++ ++D  ++    ++LMG
Sbjct:  484 VGTDFKIEDSNYNRVIIMTDADTDGAHIQVLLLTFFFKYMKPLVQAGRVFIALPPLYKLEKGKGKTKRVEYAWTDEELNKLQKELGKGF--TLQRYKGLGEMNPEQLWETTMNPETRTLIRVQVEDEVRSSKRVTTLMG 620          
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_MYCPN (DNA gyrase subunit B OS=Mycoplasma pneumoniae GN=gyrB PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.248e-18
Identity = 51/132 (38.64%), Postives = 76/132 (57.58%), Query Frame = 3
Query:   45 DFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            DF ++ LRY++I+  TDAD  GAHI TL+LTFF+++   L +   IY+  PPLYK            D QL       P+   N +QR  GL  M  +++W TT++P++R L ++ ++DA+     FS LMG
Sbjct:  498 DFELEKLRYNKIIIMTDADVDGAHIRTLLLTFFFRFMYPLVEQGNIYIAQPPLYKVSYSNKDLYMQTDVQLEEWKQQHPNLKYN-LQRYKGLGEMDAIQLWETTMDPKVRTLLKVTVEDASIADKAFSLLMG 628          
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_MYCGA (DNA gyrase subunit B OS=Mycoplasma gallisepticum GN=gyrB PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.630e-18
Identity = 52/146 (35.62%), Postives = 83/146 (56.85%), Query Frame = 3
Query:    6 VRIRVPGLGE-MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            +R  +  +G  +  +F +  +RY++I+  TDAD  GAHI  L+LTFF+++   L +   +Y+  PPLY+    K  +  Y DAQL    +  P +    +QR  GL  M  V++W TT++P+ R L +++I+DA      FS LMG
Sbjct:  482 IRTLITAIGAGVNPEFSLDKIRYNKIIIMTDADVDGAHIRILLLTFFFRHMFPLIEKGHVYIAQPPLYRVSYNKQNKYIYSDAQLEEWKNQNP-NVRYELQRYKGLGEMDDVQLWETTMDPEKRTLLKVSINDAANADKTFSLLMG 626          
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_HALSQ (DNA gyrase subunit B OS=Haloferax sp. (strain Aa 2.2) GN=gyrB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.129e-18
Identity = 46/137 (33.58%), Postives = 78/137 (56.93%), Query Frame = 3
Query:   30 GEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            G +G++F I+  RY +++  TDAD  GAHI TL+LT  Y++   L +  ++Y   PPLY+           D+A+ + +     +     +QR  GL  M P ++W TT+NP+ R+L+++ ++DA     +F+ LMG
Sbjct:  481 GGVGDEFDIEKARYQRLILMTDADVDGAHIRTLLLTLLYRHMRPLIEAGYVYAAQPPLYRVRYRGNTYDAMDEAERDRIIEEECNGNPTQVQRFKGLGEMNPDQLWDTTMNPENRVLKRITVEDAAAADRMFNILMG 617          
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_MYCGE (DNA gyrase subunit B OS=Mycoplasma genitalium GN=gyrB PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.802e-17
Identity = 50/132 (37.88%), Postives = 76/132 (57.58%), Query Frame = 3
Query:   45 DFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            DF ++ LRY +I+  TDAD  GAHI TL+LTFF+++   L +   I++  PPLYK          + D QL    S  P+     +QR  GL  M  +++W TT++P++R L ++ ++DA+     FS LMG
Sbjct:  498 DFELEKLRYSKIVIMTDADVDGAHIRTLLLTFFFRFMYPLVEQGNIFIAQPPLYKVSYSHKDLYMHTDVQLEQWKSQNPNVKF-GLQRYKGLGEMDALQLWETTMDPKVRTLLKVTVEDASIADKAFSLLMG 628          
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_MYCPN (DNA topoisomerase 4 subunit B OS=Mycoplasma pneumoniae GN=parE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.244e-17
Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3
Query:   36 MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYK-DDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLKGLI 470
            +G +F I+  +Y +I+  TDAD  GAHI  L+LTFFY+Y   L +   IY+ +PPLYK + + K  +  + + +L    +    H+  ++QR  GL  M   ++W TT+NP  R L Q+ +D+  Q     +  MG   +  K  I
Sbjct:  483 IGNNFTIRDRKYDKIIIMTDADNDGAHIQILLLTFFYRYMKPLIEKGHIYLALPPLYKFEGRDKKARYLWTEQELEQYRA---KHSHFNVQRYKGLGEMNADQLWETTMNPMTRKLIQVKLDNFIQAEKQINVFMGDKTELRKSWI 625          
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_MYCGE (DNA topoisomerase 4 subunit B OS=Mycoplasma genitalium GN=parE PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.526e-16
Identity = 52/141 (36.88%), Postives = 75/141 (53.19%), Query Frame = 3
Query:   45 DFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYK--DDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLK 461
            +F I+ L+Y +I+  TDAD  GAHI  L+LTFFY+Y   L +   +Y+ +PPLYK      K V+  + D +L +V     +  L   QR  GL  M   ++W TT+NP  R L Q+ +DD        +  MG  +D  K
Sbjct:  483 NFNIKDLKYGKIIIMTDADNDGAHIQILLLTFFYRYMQPLIELGHVYLALPPLYKLETKDRKTVKYLWSDLELESVKLKLNNFTL---QRYKGLGEMNADQLWDTTMNPTTRKLVQVKLDDLINAEKQINIFMGEKSDLRK 620          
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_MYCCT (DNA gyrase subunit B OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=gyrB PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.526e-16
Identity = 51/138 (36.96%), Postives = 79/138 (57.25%), Query Frame = 3
Query:   36 MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYK---DDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440
            +G+DF I  + Y +I+  TDAD  GAHI TL+LTFFY++   L     +Y+ +PPLYK   +DK  +    +D+ +LN  + +  +     IQR  GL  M   ++W TT++P+ R + Q+ I D      +F +LMG
Sbjct:  480 VGKDFDISDINYGKIIIMTDADTDGAHIQTLLLTFFYRHMKDLIIHKKVYIALPPLYKITFNDKSFIY--LWDEEELNKFNKT--NTKKYEIQRYKGLGEMNADQLWQTTMDPKNRKIIQVTISDGLLAERMFKTLMG 613          
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_MYCLE (DNA gyrase subunit B OS=Mycobacterium leprae GN=gyrB PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.993e-16
Identity = 49/149 (32.89%), Postives = 81/149 (54.36%), Query Frame = 3
Query:   42 EDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKL-VQGCYDDAQLNNVHSS-----FPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLKGLI 470
            ++F I  LRYH+I+   DAD  G HI TL+LT  +++   L +  ++++  PPLYK    ++  +  Y D++ + +  +        +  + IQR  GL  M    +W TT++P +R+LRQ+ +DDA     +FS LMG   D  +  I
Sbjct:  518 DEFDISRLRYHKIVLMADADVDGQHISTLLLTLLFRFMRPLIEHGYVFLAQPPLYKLKWQRMDPEFAYSDSERDGLLETGLKLGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFI 666          
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_STRP8 (DNA gyrase subunit B OS=Streptococcus pyogenes serotype M18 GN=gyrB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.292e-15
Identity = 45/150 (30.00%), Postives = 78/150 (52.00%), Query Frame = 3
Query:   39 GEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLY-----KDDKGKLVQGCYDDAQLNNVHSSFP-SHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLKGLI 470
            G DF +   RY +++  TDAD  GAHI TL+LT  Y++   + +  ++Y+  PP+Y      + K  +  G   + QL      +    +  ++QR  GL  M   ++W TT++P+ R++ ++ +DDA +   VF  LMG   +  +  I
Sbjct:  490 GADFDVSKARYQKLVIMTDADVDGAHIRTLLLTLIYRFMRPVLEAGYVYIAQPPIYGVKVGSEIKEYIQPGIDQEDQLKTALEKYSIGRSKPTVQRYKGLGEMDDHQLWETTMDPENRLMARVTVDDAAEADKVFDMLMGDRVEPRRDFI 639          
The following BLAST results are available for this feature:
BLAST of EY755920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PARE_STAA89.557e-1935.97DNA topoisomerase 4 subunit B OS=Staphylococcus au... [more]
GYRB_MYCPN1.248e-1838.64DNA gyrase subunit B OS=Mycoplasma pneumoniae GN=g... [more]
GYRB_MYCGA1.630e-1835.62DNA gyrase subunit B OS=Mycoplasma gallisepticum G... [more]
GYRB_HALSQ2.129e-1833.58DNA gyrase subunit B OS=Haloferax sp. (strain Aa 2... [more]
GYRB_MYCGE1.802e-1737.88DNA gyrase subunit B OS=Mycoplasma genitalium GN=g... [more]
PARE_MYCPN5.244e-1734.25DNA topoisomerase 4 subunit B OS=Mycoplasma pneumo... [more]
PARE_MYCGE1.526e-1636.88DNA topoisomerase 4 subunit B OS=Mycoplasma genita... [more]
GYRB_MYCCT1.526e-1636.96DNA gyrase subunit B OS=Mycoplasma capricolum subs... [more]
GYRB_MYCLE1.993e-1632.89DNA gyrase subunit B OS=Mycobacterium leprae GN=gy... [more]
GYRB_STRP81.292e-1530.00DNA gyrase subunit B OS=Streptococcus pyogenes ser... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-D11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755920 ID=EY755920; Name=EY755920; organism=Citrus sinensis; type=EST; length=892bp
CCCGCGTCCGAATTCGTGTTCCCGGACTTGGAGAAATGGGAGAGGATTTT
ATGATACAGGCTCTGCGATATCATCAGATCCTCACATCAACAGATGCTGA
CGGCTACGGTGCTCACATCCTAACGCTGATGTTGACATTTTTCTACAAAT
ATCAAAACACCTTATTTGATGACTGTTGGATTTATGTCTGCGTTCCACCC
CTCTACAAAGACGACAAGGGAAAGCTGGTACAGGGCTGCTATGATGATGC
ACAGCTGAATAATGTCCATAGCTCCTTCCCTTCACATGCTTTGAATAGCA
TTCAAAGGCTCTCAGGCCTGAGATACATGATGCCTGTGCGGATGTGGTAG
ACAACACTGAACCCTCAGATCCGAATGCTTAGGCAACTGGCGATTGACGA
TGCAACACAAACACATGTTGTGTTCTCCTCCCTCATGGGGGCCATGGCGG
ACACTCTGAAGGGACTCATACAGAATGCTGCAAACCTCCTAAACCTGCAA
CATCTTGAGATCTAAGCCATCACTTAGAATGAGATCGTCATTCTTTGCAT
GTGAAACTCTGGAGAACATTGCTCCTTTATCGGAGAGCACAATGAAGATG
ATTCTATTCTTGAACATAGCTATCTGAACAGCCGTGCTAGTGTTAATACG
CAAGATTTATGTACTTTCTGCACAGTTCTTAGGGCTAGATGGATATTGAC
ATTGCATAGTTGCATATTAAAATTTACTGGCTCTGATGTAACGTGAACAG
TATGTGGATTTATCTCAAACTGATATCCTGAANATTTAATTTCGGAGATG
ACACAAAGATGCCCGACCCTCTGGAGGATCGAGGTAGCATATCTCTGATG
CAAAATATAACCCATCGAATGTGCCCCGCATTCATTCACTGG
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