EY755920
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_MYCPA (DNA gyrase subunit B OS=Mycobacterium paratuberculosis GN=gyrB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.758e-15 Identity = 49/149 (32.89%), Postives = 78/149 (52.35%), Query Frame = 3 Query: 42 EDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYK-DDKGKLVQGCYDDAQLN-----NVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLKGLI 470 ++F I LRYH+I+ DAD G HI TL+LT +++ L + +++ PPLYK + + Y D + + + + + + IQR GL M +W TT++P +R+LRQ+ +DDA +FS LMG D + I Sbjct: 517 DEFDITKLRYHKIVLMADADVDGQHISTLLLTLLFRFMRPLIEHGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKKINKDDGIQRYKGLGEMDAKELWETTMDPTVRVLRQVTLDDAAAADELFSILMGEDVDARRSFI 665
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRBS_STRSH (DNA gyrase subunit B, novobiocin-sensitive OS=Streptomyces sphaeroides GN=gyrBS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.428e-14 Identity = 53/148 (35.81%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 42 EDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYK-----DDKGKLVQGCYDDAQLNNVHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMGAMADTLKGLI 470 EDF I+ LRYH+I+ DAD G HI TL+LTF +++ L + +Y+ PPLYK DD DA + + +SIQR GL M + TT++ R+L Q+ +DDA Q +FS LMG + + I Sbjct: 525 EDFDIEKLRYHKIILMADADVDGQHINTLLLTFLFRFMRPLVEAGHVYLSRPPLYKIKWGRDDFEYAYSDRERDALVELGKQNGKRIKEDSIQRFKGLGEMNAEELRITTMDVDHRVLGQVTLDDAAQADDLFSVLMGEDVEARRSFI 672
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRBR_STRSH (DNA gyrase subunit B, novobiocin-resistant OS=Streptomyces sphaeroides GN=gyrBR PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.428e-14 Identity = 51/138 (36.96%), Postives = 74/138 (53.62%), Query Frame = 3 Query: 42 EDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDD-KGKLVQGCYDDAQLNNVHSSFPSHAL----NSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440 EDF I LRYH+I+ DAD G HI TL+LTF +++ L ++ +++ PPLYK + V+ Y D + N + +SIQR GL M + TT++P R+L Q+ +DDA +FS LMG Sbjct: 518 EDFDIAKLRYHKIILMADADVDGQHISTLLLTFLFRFMRPLVEEGHVHLSRPPLYKIKWSREHVEYAYSDRERNTLLERGRRDGRRIRDDSIQRFKGLGEMNAEELRVTTMDPDHRVLGQVTLDDAAFADDLFSVLMG 655
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_RICPR (DNA topoisomerase 4 subunit B OS=Rickettsia prowazekii GN=parE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13 Identity = 42/135 (31.11%), Postives = 74/135 (54.81%), Query Frame = 3 Query: 42 EDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYK-DDKGKLVQGCYDDAQLNNVHS-SFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440 +++ + LRY +I+ TDAD GAHI +L++TFF+ L ++ +Y+ PPLY+ K+ C ++ ++ + S S A + R GL MMP ++ TT++P+ R L ++ ++D + LMG Sbjct: 501 KNYKKENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPKLVEEGHLYLAKPPLYRLTQSNKIYYACDEEEKIKLTYKLSKASKAKIEVGRFKGLGEMMPAQLKETTMHPEKRSLLKVTLEDVQNVDKIVDDLMG 635
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_RICTY (DNA topoisomerase 4 subunit B OS=Rickettsia typhi GN=parE PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13 Identity = 42/135 (31.11%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 42 EDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYK-DDKGKLVQGCYDDAQLNNVHS-SFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440 +++ + LRY +I+ TDAD GAHI +L++TFF+ L + +Y+ PPLY+ K+ C ++ ++ + S S A + R GL MMP ++ TT++P+ R L ++ ++D + LMG Sbjct: 502 KNYKKENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPQLVKEGHLYLAKPPLYRLTQSNKIYYACDEEEKIKLTYKLSKTSKAKIEVGRFKGLGEMMPAQLKETTMHPEKRSLLKVTLEDVQNVDKIVDDLMG 636
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_PSEAE (DNA topoisomerase 4 subunit B OS=Pseudomonas aeruginosa GN=parE PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12 Identity = 44/142 (30.99%), Postives = 71/142 (50.00%), Query Frame = 3 Query: 21 PGLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALN---SIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLM 437 PG ++ + LRY +I DAD G HI TL+ F ++ L + +YV +PPLY+ D GK + D+A+ + + + + R GL M P+++ TT++P R L QL ++DAT T + L+ Sbjct: 471 PGASDLAQ------LRYGKICILADADSDGLHIATLLCALFVRHFRPLVEAGHVYVAMPPLYRIDLGKDIYYALDEAERDGILERLAAEKKRGKPQVTRFKGLGEMNPLQLRETTMDPNTRRLVQLTLEDATGTLEIMDMLL 606
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_CAUCR (DNA gyrase subunit B OS=Caulobacter crescentus GN=gyrB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12 Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 24 GLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLN 260 G G +DF +RYH+I+ TDAD GAHI TL+LTFFY+ L + +IY+ PPLYK KGK + DDA+++ Sbjct: 492 GAGIGRDDFNPDKVRYHKIVLMTDADVDGAHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKASKGKSSRYLKDDAEMD 570
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_CAUCN (DNA gyrase subunit B OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=gyrB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12 Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 24 GLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLN 260 G G +DF +RYH+I+ TDAD GAHI TL+LTFFY+ L + +IY+ PPLYK KGK + DDA+++ Sbjct: 492 GAGIGRDDFNPDKVRYHKIVLMTDADVDGAHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKASKGKSSRYLKDDAEMD 570
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_RICBR (DNA topoisomerase 4 subunit B OS=Rickettsia bellii (strain RML369-C) GN=parE PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 42/135 (31.11%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 42 EDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHS--SFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440 +++ + LRY +I+ TDAD GAHI +L++TFF+ L +D +Y+ PPLY+ + D+ + + S S A + R GL MMP+++ TT++P+ R L ++ ++D + LMG Sbjct: 501 KNYKKENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPKLVEDGHLYLAKPPLYRLTQSNKTYYANDEEEKAKLTDKLSKSSKAKIEVGRFKGLGEMMPMQLKETTMHPEKRSLLKVTLEDFQNVDKIVDDLMG 635
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_AQUAE (DNA gyrase subunit B OS=Aquifex aeolicus GN=gyrB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 33/76 (43.42%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 36 MGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNN 263 +GED ++ LRYH+I+ TDAD G+HI TL+LTFFY++ L ++ ++Y+ PPLY+ KGK DD + + Sbjct: 483 IGEDLDLKKLRYHKIILMTDADVDGSHIRTLLLTFFYRFMPKLVEEGYVYIAEPPLYRVKKGKKEIYIKDDKEFEH 558 The following BLAST results are available for this feature:
BLAST of EY755920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >EY755920 ID=EY755920; Name=EY755920; organism=Citrus sinensis; type=EST; length=892bpback to top |