EY755920
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_ECOLI (DNA topoisomerase 4 subunit B OS=Escherichia coli (strain K12) GN=parE PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11 Identity = 43/117 (36.75%), Postives = 58/117 (49.57%), Query Frame = 3 Query: 54 IQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFP-SHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDD 401 + LRY +I DAD G HI TL+ F K+ L +YV +PPLY+ D GK V + + V ++QR GL M P+++ TTL+P R L QL IDD Sbjct: 477 LSQLRYGKICILADADSDGLHIATLLCALFVKHFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEKEGVLEQLKRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTIDD 593
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_BARBK (DNA gyrase subunit B OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=gyrB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11 Identity = 45/129 (34.88%), Postives = 70/129 (54.26%), Query Frame = 3 Query: 63 LRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNN-VHSSFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAID--DATQTHVVFSSLMG 440 LRY +I+ TDAD GAHI +L++TFF++ L +Y+ VPPLY+ +G V DD+ + + + F I R GL M ++ TT+NP+ R L +++ID + +T +LMG Sbjct: 542 LRYERIIIMTDADVDGAHIASLLITFFFQEIPDLIRAGHLYLAVPPLYRISQGGKVAYARDDSHKDELLKTEFTGKGKIEIGRFKGLGEMRAEQLKETTMNPKKRTLLRVSIDTFEMQETKETVQNLMG 670
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: PARE_RICFE (DNA topoisomerase 4 subunit B OS=Rickettsia felis GN=parE PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.930e-11 Identity = 41/135 (30.37%), Postives = 71/135 (52.59%), Query Frame = 3 Query: 42 EDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHS--SFPSHALNSIQRLSGLRYMMPVRMW*TTLNPQIRMLRQLAIDDATQTHVVFSSLMG 440 +++ + LRY +I+ TDAD GAHI +L++TFF+ L ++ +Y+ PPLY+ + D+ + + S S A + R GL MMP ++ TT++P+ R L ++ ++D + LMG Sbjct: 501 KNYKEENLRYEKIIIMTDADVDGAHIASLLMTFFFLRMPKLVEEGHLYLAKPPLYRLTQSNKTYYAGDEEEKAKLTDKLSKASKAKIEVGRFKGLGEMMPAQLKETTMHPEKRSLLKVTLEDFQNVDKIVDDLMG 635
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_PSEPU (DNA gyrase subunit B OS=Pseudomonas putida GN=gyrB PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 24 GLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDD 248 G G E++ I LRYH I+ TDAD G+HI TL+LTFF++ L + +IY+ PPLYK KGK Q DD Sbjct: 477 GCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVKKGKQEQYIKDD 551
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_PSEAE (DNA gyrase subunit B OS=Pseudomonas aeruginosa GN=gyrB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 3 Query: 24 GLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDD 248 G G E++ I LRYH I+ TDAD G+HI TL+LTFF++ L + +IY+ PPLYK +GK Q DD Sbjct: 477 GCGIGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVKRGKQEQYIKDD 551
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_VIBPA (DNA gyrase subunit B OS=Vibrio parahaemolyticus GN=gyrB PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 3 Query: 24 GLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSS 275 G G +++ LRYH I+ TDAD G+HI TL+LTFFY+ L + ++Y+ PPLYK KGK Q D+ +N S Sbjct: 476 GCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKVKKGKQEQYIKDEEAMNQYQVS 559
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_VIBCH (DNA gyrase subunit B OS=Vibrio cholerae GN=gyrB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 3 Query: 24 GLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLN 260 G G +++ LRYH I+ TDAD G+HI TL+LTFFY+ L + +IY+ PPLYK KGK Q D+ +N Sbjct: 476 GCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVKKGKQEQYIKDEEAMN 554
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_HELPY (DNA gyrase subunit B OS=Helicobacter pylori GN=gyrB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 36/87 (41.38%), Postives = 50/87 (57.47%), Query Frame = 3 Query: 42 EDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKGKLVQGCYDDAQLNNVHSSFPSHALNSI 302 E F I+ LRYH+I+ TDAD G+HI TL++TFFY+Y L + +Y+ PLYK KGK D L++ H +NS+ Sbjct: 478 ESFDIERLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIEQGHVYIAQAPLYKYKKGKTEIYLKDSVALDHF---LIEHGINSV 561
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_RICFE (DNA gyrase subunit B OS=Rickettsia felis GN=gyrB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11 Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 3 Query: 24 GLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKG 221 G G +F ++ LRYH+++ TDAD G+HI TL+LTFFY++ L + ++Y+ PPLYK KG Sbjct: 486 GTGVDNREFSLEKLRYHKVIIMTDADVDGSHIRTLLLTFFYRHMPELINKGYLYIAQPPLYKVKKG 551
BLAST of EY755920 vs. ExPASy Swiss-Prot
Match: GYRB_RICBR (DNA gyrase subunit B OS=Rickettsia bellii (strain RML369-C) GN=gyrB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11 Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 3 Query: 24 GLGEMGEDFMIQALRYHQILTSTDADGYGAHILTLMLTFFYKYQNTLFDDCWIYVCVPPLYKDDKG 221 G G +F ++ LRYH+++ TDAD G+HI TL+LTFFY++ L + ++Y+ PPLYK KG Sbjct: 486 GTGVDNREFSLEKLRYHKVIIMTDADVDGSHIRTLLLTFFYRHMPELINKGYLYIAQPPLYKVKKG 551 The following BLAST results are available for this feature:
BLAST of EY755920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >EY755920 ID=EY755920; Name=EY755920; organism=Citrus sinensis; type=EST; length=892bpback to top |