EY755877

Overview
NameEY755877
Unique NameEY755877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY755877_ssr499 microsatellite EY755877_ssr499:499..510. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY755877 vs. ExPASy Swiss-Prot
Match: DCAM_MAIZE (S-adenosylmethionine decarboxylase proenzyme OS=Zea mays GN=SAMDC PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.365e-35
Identity = 80/166 (48.19%), Postives = 107/166 (64.46%), Query Frame = -1
Query:  303 DRKRASVFYKXNESS----AAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTF--MLDLKGYSCGEKIYEELGNNGSLIYYSFSRAD--CSTSPRSILKC 776
            D+K+A VF+K N       A  MT+ SGI +I+P+ EICDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E +G D   +    L++RVL CF P+EFSVA+ +   G  H  T+   L  + Y C   + +EL   G L+Y SF  A+   +TSP+S+  C
Sbjct:  195 DKKKACVFFKTNADGNTTCAKEMTKLSGISEIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVMGLDATALSYGDLVKRVLRCFGPSEFSVAV-TIFGGRGHAGTWGKALGAEVYDCNNMVEQELPGGGLLVYQSFCAAEDAVATSPKSVFHC 359          
BLAST of EY755877 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSJ (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. japonica GN=SAMDC PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.445e-35
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = -1
Query:  303 VTL*RWHDWFDRKRASVFYKXNE----SSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLK--GYSCGEKIYEELGNNGSLIYYSFSRAD----CSTSPRSILKC 806
            VTL       D+++ASVF+K +     S A  MT+ SGI  I+P+ EICDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E VG+D   +    L++RVL CF P+EFSVA+ +   G  H  T+  +L    Y C   + +EL   G LIY SF   +       SP+S+L C
Sbjct:  185 VTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAV-TIFGGHGHAGTWAKELNADAYKCNNMVEQELPCGGLLIYQSFDATEDVPVAVGSPKSVLHC 361          
BLAST of EY755877 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSI (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. indica GN=SAMDC PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 2.166e-34
Identity = 84/178 (47.19%), Postives = 110/178 (61.80%), Query Frame = -1
Query:  303 VTL*RWHDWFDRKRASVFYKXNE----SSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLK--GYSCGEKIYEELGNNGSLIYYSFSRAD----CSTSPRSILKC 806
            VTL       D+++ASVF+K +     S A  MT+ SGI  I+P+ EICDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E VG+D   +    L++RVL CF P+EFSVA+ +   G  H  T+  +L    Y C   + +EL   G LIY SF   +       SP+S+L C
Sbjct:  185 VTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGLAFSTIHVTPEDGFSYASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAV-TIFGGHGHAGTWAKELNADAYKCNNMVEQELPCGGLLIYQSFDATEDVPVAVGSPKSVLHC 361          
BLAST of EY755877 vs. ExPASy Swiss-Prot
Match: DCAM_HORCH (S-adenosylmethionine decarboxylase proenzyme OS=Hordeum chilense GN=SAMDC PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.404e-33
Identity = 83/178 (46.63%), Postives = 109/178 (61.24%), Query Frame = -1
Query:  303 VTL*RWHDWFDRKRASVFYKXNE----SSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTF--MLDLKGYSCGEKIYEELGNNGSLIYYSFSR----ADCSTSPRSILKC 806
            VTL       D+ +ASVF+K +     S A  MT+ SGI  I+P+ E+CDF+F+PCGYSMN+I G A STIHVTPEDGFSYAS+E  G D   +    +++RVL CF P+EFSVA+ +   G  H  T+   LD + Y C   + +EL   G LIY SF+     A  + SPRS+  C
Sbjct:  178 VTLEMCMTGLDKTKASVFFKTHADGHVSCAKEMTKLSGISDIIPEMEVCDFDFEPCGYSMNAINGSAFSTIHVTPEDGFSYASYEVQGMDASALAYGDIVKRVLRCFGPSEFSVAV-TIFGGRGHAATWGKKLDAEAYDCNNVVEQELPCGGVLIYQSFAANEELAVSAGSPRSVFHC 354          
BLAST of EY755877 vs. ExPASy Swiss-Prot
Match: DCAM_DICDI (S-adenosylmethionine decarboxylase proenzyme OS=Dictyostelium discoideum GN=amd1 PE=3 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 1.118e-14
Identity = 53/154 (34.42%), Postives = 77/154 (50.00%), Query Frame = -1
Query:  336 HDWFDRKRASVFYKXNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGD---TFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRAD 788
            HD  D      F+K    SA   T +SGI  +LP S I DF+FDPCGYSMN +  +   TIH+TPE   SY SF+    +  +     LL +VL  FKP  F+ AL+++  G   GD    F +++  Y+   K          ++  ++ + D
Sbjct:  207 HD-LDETVMKQFFKREGVSAWDTTVNSGIADLLPGSMIDDFQFDPCGYSMNGLLNEFYWTIHITPESHCSYVSFDT---NVALADYNQLLAKVLNVFKPGRFTAALYAE-DGAPCGDPYTAFDVNVPSYAIQNKTVHGFDGGYDVVVSNYQQLD 355          
BLAST of EY755877 vs. ExPASy Swiss-Prot
Match: DCAM_DROME (S-adenosylmethionine decarboxylase proenzyme OS=Drosophila melanogaster GN=SamDC PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.547e-14
Identity = 45/106 (42.45%), Postives = 60/106 (56.60%), Query Frame = -1
Query:  462 DRKRASVFYKXNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSI-EGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSD 776
            D +  S+FYK   + A   T  SGI  ILP   I DF FDPCGYSMN I +     TIH+TPE+ FSY SFE    +  +     L+ +V+  FKP +F V + ++
Sbjct:  193 DPETMSIFYKNKFNDANGATVKSGIDTILPTMHIDDFLFDPCGYSMNGINDKGEYMTIHITPENQFSYVSFET---NVALSNYRKLINQVINTFKPGKFIVTIFAN 295          
BLAST of EY755877 vs. ExPASy Swiss-Prot
Match: DCAM_HUMAN (S-adenosylmethionine decarboxylase proenzyme OS=Homo sapiens GN=AMD1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.157e-11
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = -1
Query:  471 FYKXNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 755
            FY  +  +A  +T +SGIR ++P S I    F+PCGYSMN ++ D    TIH+TPE  FSY SFE    +        L+ +V+  FKP +F   L
Sbjct:  192 FYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284          
BLAST of EY755877 vs. ExPASy Swiss-Prot
Match: DCAM_BOVIN (S-adenosylmethionine decarboxylase proenzyme OS=Bos taurus GN=AMD1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.157e-11
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = -1
Query:  471 FYKXNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 755
            FY  +  +A  +T +SGIR ++P S I    F+PCGYSMN ++ D    TIH+TPE  FSY SFE    +        L+ +V+  FKP +F   L
Sbjct:  192 FYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284          
BLAST of EY755877 vs. ExPASy Swiss-Prot
Match: DCAM_RAT (S-adenosylmethionine decarboxylase proenzyme OS=Rattus norvegicus GN=Amd1 PE=2 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.511e-11
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = -1
Query:  471 FYKXNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 755
            FY  +  +A  +T +SGIR ++P S I    F+PCGYSMN ++ D    TIH+TPE  FSY SFE    +        L+ +V+  FKP +F   L
Sbjct:  192 FYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284          
BLAST of EY755877 vs. ExPASy Swiss-Prot
Match: DCAM_MESAU (S-adenosylmethionine decarboxylase proenzyme OS=Mesocricetus auratus GN=AMD1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.511e-11
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = -1
Query:  471 FYKXNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVS-TIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVAL 755
            FY  +  +A  +T +SGIR ++P S I    F+PCGYSMN ++ D    TIH+TPE  FSY SFE    +        L+ +V+  FKP +F   L
Sbjct:  192 FYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTL 284          
The following BLAST results are available for this feature:
BLAST of EY755877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
DCAM_MAIZE4.365e-3548.19S-adenosylmethionine decarboxylase proenzyme OS=Ze... [more]
DCAM_ORYSJ7.445e-3547.19S-adenosylmethionine decarboxylase proenzyme OS=Or... [more]
DCAM_ORYSI2.166e-3447.19S-adenosylmethionine decarboxylase proenzyme OS=Or... [more]
DCAM_HORCH1.404e-3346.63S-adenosylmethionine decarboxylase proenzyme OS=Ho... [more]
DCAM_DICDI1.118e-1434.42S-adenosylmethionine decarboxylase proenzyme OS=Di... [more]
DCAM_DROME5.547e-1442.45S-adenosylmethionine decarboxylase proenzyme OS=Dr... [more]
DCAM_HUMAN1.157e-1140.63S-adenosylmethionine decarboxylase proenzyme OS=Ho... [more]
DCAM_BOVIN1.157e-1140.63S-adenosylmethionine decarboxylase proenzyme OS=Bo... [more]
DCAM_RAT1.511e-1140.63S-adenosylmethionine decarboxylase proenzyme OS=Ra... [more]
DCAM_MESAU1.511e-1140.63S-adenosylmethionine decarboxylase proenzyme OS=Me... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-H08-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755877 ID=EY755877; Name=EY755877; organism=Citrus sinensis; type=EST; length=902bp
CTTTTTTTTTTTTTTTTTTGATATAATAATATGACTCTTATTATAAAAGA
AGATACTGGTTTAACATCTACATCTCCGGAAATCCAACATAACAGAAATC
CAAAAACATAAGACCTTGTTCACAATAACAGGAAAAATGCAGCAAAACGG
AAAGGTAAAGGCTGCTCAAGCCCTACCATTACATAACCCCACCACATTTT
ATTATATAAGCGAAGGATTAAAATGAAAAAAACAAACACGATATTATATC
CGGGACACTATTTCCCTTCAACTTCCTCGTCCTTCTCGTCCTCGCTCCAA
CAGCATTTCAAGATTGACCTAGGAGATGTGGAGCAATCAGCCCTCGAAAA
GCTGTAGTAGATCAGCGAACCATTATTACCGAGCTCTTCATATATCTTTT
CTCCACAGGAATATCCCTTCAAGTCCAGCATGAAGGTGTCTCCATGTTCA
TCGCCAACAATGTCAGAATGCAGAGCAACAGAAAACTCAGCGGGTTTGAA
GCAAGCAAGCACCCTCTCAAGCAAGGGAGTCAACTTCACAACCTCAAAAT
CATAACCCACAGCCTCAAAACTTGCATAACTGAAACCATCTTCAGGTGTG
ACGTGGATAGTAGATACTGCATCCCCTTCAATACTATTCATGGAGTAACC
ACAAGGGTCAAACTCAAAATCACAAATCTCAGATTTTGGAAGAATCTTTC
TGATGCCAGAGTCCTCGGTCATCATAGCGGCTGAGCTTTCATTAGNTTTG
TAGAAGACAGATGCCCTCTTTCTGTCAAACCAGTCATGCCATCTCTAGAG
TGTAACTGGGGTTACATGGCTCCTGCTTAGCAGAGCAGAGTAACATGCAT
CTCTTTGTGTGTCAGACTACCATGACAAAGCTGGCTGNCATACAAACTGG
CA
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