EY755839

Overview
NameEY755839
Unique NameEY755839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PORPU (ATP synthase subunit delta, chloroplastic OS=Porphyra purpurea GN=atpD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.684e-18
Identity = 57/185 (30.81%), Postives = 106/185 (57.30%), Query Frame = -3
Query:  143 ATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMV-----DEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDL 679
            A +A  YA AL+DLA     +E  S D++ I+ I  +  ++  F  NP   IE K++++     D+I ++      T +FL +L+D KR+ ++  I  ++ E+   M +  +A +S+ + L S+    +  +++ +T AK V++   +DP L+ GFTI+ G    K+ID S++ QL+++A+ LD+
Sbjct:    8 AKIAQPYASALLDLANEKKAIEQISQDMKLIKDILLQSGKLKYFLANPLKTIEAKKQVIAATFGDQISEN------TLSFLMVLVDRKRISMLDVIAGKYLELAYAMESLTIANISTSIALNSDQENLLIDKIKAMTSAKEVKLVISVDPELIGGFTIQIGS---KVIDTSIRGQLKQMASHLDV 183          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_MICAN (ATP synthase subunit delta OS=Microcystis aeruginosa (strain NIES-843) GN=atpH PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.684e-18
Identity = 53/183 (28.96%), Postives = 103/183 (56.28%), Query Frame = -3
Query:  149 GIRMSATVATXYAIALVDLAKANNTLESTSADVEKI-EKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 694
            G  +S+ +A  YA AL+ +A+++  LE+   +++ + E + +   +  F  NP I  E K+ ++ ++  SSA  P   NF+ +L+D +R+  ++ + +++  +   +TNT +A VSS  +L       +  +V+ LTGA  V +KT +D SL+ G  I+ G    ++ D S++ QL+ ++  L
Sbjct:    3 GSLISSEIAEPYAQALLSVAQSSGQLEAIGGEIKSLLELLENAPDLRAFIGNPVIKEEAKKAVLSQVMGSSA-NPYLTNFMMLLVDKRRIQFLEPVCQQYLTLARVLTNTVLAEVSSATELNDSQKQIVIDKVKTLTGANVVELKTKVDGSLIGGVVIKVGS---QVFDASIRGQLQRLSLSL 181          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PROM0 (ATP synthase subunit delta OS=Prochlorococcus marinus (strain MIT 9301) GN=atpH PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.401e-18
Identity = 51/177 (28.81%), Postives = 97/177 (54.80%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKI-EKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            +V T YA AL+ +   N+  E   ++V+++ E I +  ++ +   +P ++ + K+++++EI        L  NFL +L D +R+ ++  I+  F E+Y + +N  +A V+S V+L  E    I K++  + G + + + T IDPSL+ GF    G    K+ID S+  Q+ ++   L
Sbjct:    6 SVTTPYAEALLQVVNENSQTEEMVSEVKQLLELINNSPELEKALSSPILETDAKKKIINEIFSKKVNSSLL-NFLKLLADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELTDEQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGS---KVIDASLASQIRKLGLSL 178          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_CYAP8 (ATP synthase subunit delta OS=Cyanothece sp. (strain PCC 8801) GN=atpH PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.426e-17
Identity = 52/183 (28.42%), Postives = 98/183 (53.55%), Query Frame = -3
Query:  149 GIRMSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSE-KQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 694
            G  +S+ +A  YA AL+ +A+A+N  E    D   +  I  E + +    ++P I    K+ ++  +       P   NF+ +L+D +R+  +++I +++  +  K+TNT +A V+S  +L       +  +++ LTGA+ V IKT +DP L+ G TI+ G    ++ D S++ QL  ++  L
Sbjct:    3 GSLISSAIAEPYAQALMSVAQAHNLTEQFGDDCRSLIAILEESRDLQGLILSPVIKETDKKAVLRRMM-GDRTSPYLLNFIMLLVDKRRIIFLEEICQQYLTLLRKLTNTVLAEVTSAKELSDRQCRAVTDKIKDLTGAQGVEIKTSVDPDLIGGVTIKVGS---QVFDASLRGQLRRVSLSL 181          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_NOSP7 (ATP synthase subunit delta OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=atpH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.862e-17
Identity = 53/179 (29.61%), Postives = 96/179 (53.63%), Query Frame = -3
Query:  149 SATVATXYAIALVDLAKANNTLESTSADVEKIEKIF-SEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 682
            +A VA  YA AL+ +A++ N  E    D      +  ++KQ+H FF NP I  E K+ ++ +I    +  P   NFL IL+D +R+  ++ I +++  +  ++  T +A V S V L       I ++V  ++ A+ V ++T +D  L+ G  I+ G    ++ID S++ QL  ++ +L
Sbjct:    7 AAEVAQPYAQALLSIAQSKNLTEEFGEDARTFLGLLRADKQLHNFFSNPFIQAENKKALIKQILGEGS-NPYLRNFLLILVDKRRIAFLESIFQQYLALLRQLNQTVLAEVISAVPLTEAQQQAIIQKVIAISNARQVELETKVDSELIGGVIIKVGS---QVIDASIRGQLRRLSLRL 181          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_TRIEI (ATP synthase subunit delta OS=Trichodesmium erythraeum (strain IMS101) GN=atpH PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.177e-17
Identity = 54/180 (30.00%), Postives = 96/180 (53.33%), Query Frame = -3
Query:  149 MSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 685
            ++  +   YA AL+ LA++ +  +  + DV  +  I  E  +  +F  NP I  E K+ +V  +     + PL  NFL +LID  R+  ++ I K++  +  ++  T +A V+S V+L       I ++V+ +T A+ V I+T +DPS++ G  I+ G    ++ID S++ QL  I   L
Sbjct:    4 IAGEIVEPYAAALMSLAQSKDLTDKFAEDVRSLINILDESPEFKQFVGNPVIKQEDKKAVVKRML-GEQVDPLMRNFLMLLIDKGRITFLEQIGKQYLALLRELNQTVLAEVTSTVELNENQKNTIRERVKSMTSAREVEIETKVDPSILGGVIIKIGS---QIIDSSLQGQLRRIGISL 179          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PROMS (ATP synthase subunit delta OS=Prochlorococcus marinus (strain AS9601) GN=atpH PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.177e-17
Identity = 49/177 (27.68%), Postives = 98/177 (55.37%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            +V T YA AL+ +   N+  E   ++V+++ ++ ++  ++ +   +P ++ + K++++ EI  +     L  NFL +L D +R+ ++  I+  F E+Y + +N  +A V+S V+L  E    I K++  + G + + + T IDPSL+ GF    G    K+ID S+  Q+ ++   L
Sbjct:    6 SVTTPYAEALLQVVNENSQTEEMVSEVKQLLELVNDSPELEKALSSPILETDAKKKIIIEIFSNKVNSSLL-NFLKLLADRQRIGILTSILDRFLEIYRENSNIALATVTSAVELTDEQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGS---KVIDASLASQIRKLGLTL 178          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PROM4 (ATP synthase subunit delta OS=Prochlorococcus marinus (strain MIT 9211) GN=atpH PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.177e-17
Identity = 47/177 (26.55%), Postives = 93/177 (52.54%), Query Frame = -3
Query:  149 TVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 676
            T+ T YA A + +A++   +E   A  + I +++ E  ++ E   +P +++E K+  +++I  S  + P   NF+ +L + +R+  +  +++   E+Y    N  +A V+S   L  +  A + K VQ + G  N+ +   +DP L+ GF +R G    K+ID S+  Q+  +  +L
Sbjct:    6 TITTPYAEAFLQVAESKKEVEKIIAQAKSILQLWDESSELREAMGSPVLEVESKKAALEKIF-SGKVTPSFLNFMKLLAERQRIGFLNSVLERLLELYRAQRNIALATVTSATPLNEDQQAALLKNVQSVAGTNNLELNLKVDPDLIGGFVVRVGS---KVIDASLSGQVRRMGLEL 178          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_CYAA5 (ATP synthase subunit delta OS=Cyanothece sp. (strain ATCC 51142) GN=atpH PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.177e-17
Identity = 56/183 (30.60%), Postives = 98/183 (53.55%), Query Frame = -3
Query:  149 GIRMSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 694
            G   S  +A  YA AL+ LA++ +   S   D   I  I  E  ++ EF  +P I  E KR +++ +  +     L  NFL +L+D +R+  ++ I +++  +  K+TNT +A V++  +L       +  +++ LTGA++V +KT IDP L+ G  I+ G    ++ D S++ QL  I+  L
Sbjct:    3 GSLFSTEIAEPYAQALMSLAQSRDITRSIGEDCRSILDILEESAELREFISSPIIKDEDKRGVLNRLLGNDIHHYLR-NFLMLLVDKRRIVFLQAICEQYLALLRKLTNTVLAEVTASTELSEGQRRDVIDKIKALTGAESVELKTDIDPDLIGGVIIKVGS---QVFDASLRGQLRRISISL 181          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_BACWK (ATP synthase subunit delta OS=Bacillus weihenstephanensis (strain KBAB4) GN=atpH PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.177e-17
Identity = 55/176 (31.25%), Postives = 92/176 (52.27%), Query Frame = -3
Query:  149 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 673
            VA  YA+AL  +AK  + LE    ++  ++ +F++  ++H F   P I  E+K+  +  +  S +   L  N L ILID KR+D++ +I  E+  + N+  N   A V S+  L  E    IA+   K TG   +R+K V+D  L+ G  +R G    ++ D S++ +L  I  +L
Sbjct:    6 VAKRYAVALFKIAKEKHVLEMFEEELRLVQNVFTKNGELHSFLTQPNISKEQKKTFLANVFASVSESIL--NTLYILIDNKRIDILPEIANEYVVLANEERNVADATVYSIRLLSEEEKLNIAEAFAKKTGKDAIRVKNVVDEDLLGGIKVRIGN---RIYDGSLQGKLARIQREL 176          
The following BLAST results are available for this feature:
BLAST of EY755839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
ATPD_PORPU1.684e-1830.81ATP synthase subunit delta, chloroplastic OS=Porph... [more]
ATPD_MICAN1.684e-1828.96ATP synthase subunit delta OS=Microcystis aerugino... [more]
ATPD_PROM06.401e-1828.81ATP synthase subunit delta OS=Prochlorococcus mari... [more]
ATPD_CYAP81.426e-1728.42ATP synthase subunit delta OS=Cyanothece sp. (stra... [more]
ATPD_NOSP71.862e-1729.61ATP synthase subunit delta OS=Nostoc punctiforme (... [more]
ATPD_TRIEI3.177e-1730.00ATP synthase subunit delta OS=Trichodesmium erythr... [more]
ATPD_PROMS3.177e-1727.68ATP synthase subunit delta OS=Prochlorococcus mari... [more]
ATPD_PROM43.177e-1726.55ATP synthase subunit delta OS=Prochlorococcus mari... [more]
ATPD_CYAA53.177e-1730.60ATP synthase subunit delta OS=Cyanothece sp. (stra... [more]
ATPD_BACWK3.177e-1731.25ATP synthase subunit delta OS=Bacillus weihensteph... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-D11-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755839 ID=EY755839; Name=EY755839; organism=Citrus sinensis; type=EST; length=909bp
TTTTTTTTTTTTTTTTTTTTCCTTAACAAATAAAAATGTTTTACAAACAA
ACTTCAATCAAATTATACAAAACCAAATTCAGAAAACGAAAAAAAAAAAA
ATTCCTTCAAAAATCATATCATACAGCAAGTTGGACATCACCCAAATCAA
GCTGAGCAGCGATCTCCTCCAACTGTTTCTTGACACTCATATCAATCAAC
TTAAACCCCCACTTCCCATACCGGATCGTAAAACCCGCCACCAAGCTCGG
GTCAATCACGGTCTTTATCCTCACATTCTTGGCCCCAGTCAACTTCTGGA
CTTGCTTCGCTATCTGAGCCAAATGCTCCGACTCCAGCTTCACCACCGAG
CTCACCACCGCCATCTCCGTATTCGTCATCTTATTATACACCTCCTCGAA
CTCCTTCACTATGTCCTTCACCACGTCCACCCTCTTCGCGTCGATCAGTA
TGTTCAAGAAATTCCCGGTCAGCGGCTGCAGCGCCGACGACTTGCATATC
TCGTCCACCATCTCTCTTTTCTTCTCGATATCGATGGTGGGGTTCACGAA
GAACTCATGGATTTGTTTCTCGCTGAAGATTTTCTCGATCTTTTCCACGT
CGGCGCTCGTGGACTCGAGGGTGTTGTTCGCTTTCGCCAAGTCCACCAGC
GCGATGGCGTANCTGGTCGCCACTGTGGCTGACATTCTGATTCCGTGGGC
GCCCCCCCNGCGTGGGCCGGAAGGGATGTTGGCCGATAATGGGTTTCGAG
AGGCCCCCCGNNCGNAGGGAANAGTTTGATTGNATTGAAAGGGTTCCGGT
TGCTAAAAAACCCCCTTTTCCGATGAAACCCTTATCTGATCTGAGCAACG
CTTAGCTAAGCTGCTCTTTGCTGCCCAAAAAGAGCCGAAGAAAGAGTATC
AAGACGGGG
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